RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
TRIM3-215ENST00000639856 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
TRIM3-215ENST00000639856 A1BGP04217 495 aa18.56■□□□□ 0.56
TRIM3-215ENST00000639856 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
TRIM3-215ENST00000639856 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
TRIM3-215ENST00000639856 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
TRIM3-215ENST00000639856 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
TRIM3-215ENST00000639856 LRP6O75581 1613 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 SSH3Q8TE77 659 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 MYD88Q99836 296 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
TRIM3-215ENST00000639856 DOT1LQ8TEK3 1739 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 TUBGCP6Q96RT7 1819 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 POLA2Q14181 598 aa18.55■□□□□ 0.56
TRIM3-215ENST00000639856 METTL22Q9BUU2 404 aaPredicted RBP18.55■□□□□ 0.56
TRIM3-215ENST00000639856 BCL9O00512 1426 aa18.54■□□□□ 0.56
TRIM3-215ENST00000639856 SRGAP3O43295 1099 aa18.54■□□□□ 0.56
TRIM3-215ENST00000639856 AFDNP55196 1824 aaKnown RBP18.54■□□□□ 0.56
TRIM3-215ENST00000639856 NEURL1BA8MQ27 555 aa18.53■□□□□ 0.56
TRIM3-215ENST00000639856 GRM8O00222 908 aa18.53■□□□□ 0.56
TRIM3-215ENST00000639856 SYTL4Q96C24 671 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-215ENST00000639856 THRAP3Q9Y2W1 955 aaKnown RBP18.53■□□□□ 0.56
TRIM3-215ENST00000639856 ERBB4Q15303 1308 aa18.53■□□□□ 0.56
TRIM3-215ENST00000639856 NEXNQ0ZGT2 675 aa18.53■□□□□ 0.56
TRIM3-215ENST00000639856 USP26Q9BXU7 913 aa18.53■□□□□ 0.56
TRIM3-215ENST00000639856 JCADQ9P266 1359 aa18.53■□□□□ 0.56
TRIM3-215ENST00000639856 DDIT3P35638 169 aa18.52■□□□□ 0.56
TRIM3-215ENST00000639856 DDB1Q16531 1140 aa18.52■□□□□ 0.56
TRIM3-215ENST00000639856 C8orf37Q96NL8 207 aa18.52■□□□□ 0.56
TRIM3-215ENST00000639856 CDCA7Q9BWT1 371 aaPredicted RBP18.52■□□□□ 0.56
TRIM3-215ENST00000639856 TTLL7Q6ZT98 887 aa18.52■□□□□ 0.55
TRIM3-215ENST00000639856 KAZALD1Q96I82 304 aa18.52■□□□□ 0.55
TRIM3-215ENST00000639856 SUCLG2Q96I99 432 aa18.52■□□□□ 0.55
TRIM3-215ENST00000639856 UTYO14607 1347 aa18.52■□□□□ 0.55
TRIM3-215ENST00000639856 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.55
TRIM3-215ENST00000639856 CD2BP2O95400 341 aaKnown RBP18.51■□□□□ 0.55
TRIM3-215ENST00000639856 GCKRQ14397 625 aa18.51■□□□□ 0.55
TRIM3-215ENST00000639856 DNAJC10Q8IXB1 793 aa18.51■□□□□ 0.55
TRIM3-215ENST00000639856 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
TRIM3-215ENST00000639856 MX1P20591 662 aa18.5■□□□□ 0.55
TRIM3-215ENST00000639856 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
TRIM3-215ENST00000639856 PLBD2Q8NHP8 589 aa18.5■□□□□ 0.55
TRIM3-215ENST00000639856 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
TRIM3-215ENST00000639856 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
TRIM3-215ENST00000639856 SURF6O75683 361 aaKnown RBP18.5■□□□□ 0.55
TRIM3-215ENST00000639856 REC8O95072 547 aa18.5■□□□□ 0.55
TRIM3-215ENST00000639856 JARID2Q92833 1246 aaPredicted RBP18.5■□□□□ 0.55
TRIM3-215ENST00000639856 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.5■□□□□ 0.55
TRIM3-215ENST00000639856 BCL9LQ86UU0 1499 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 MTX1Q13505 466 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 RABEP1Q15276 862 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
TRIM3-215ENST00000639856 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 SLC4A9Q96Q91 983 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 TSHZ3Q63HK5 1081 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
TRIM3-215ENST00000639856 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
TRIM3-215ENST00000639856 STAP2Q9UGK3 403 aa18.49■□□□□ 0.55
TRIM3-215ENST00000639856 ERC2O15083 957 aa18.48■□□□□ 0.55
TRIM3-215ENST00000639856 RAB11FIP3O75154 756 aa18.48■□□□□ 0.55
TRIM3-215ENST00000639856 BARGINQ6ZT62 677 aa18.48■□□□□ 0.55
TRIM3-215ENST00000639856 IL1RAPL2Q9NP60 686 aa18.48■□□□□ 0.55
TRIM3-215ENST00000639856 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
TRIM3-215ENST00000639856 MCM4P33991 863 aa18.47■□□□□ 0.55
TRIM3-215ENST00000639856 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
TRIM3-215ENST00000639856 ZBTB3Q9H5J0 574 aa18.47■□□□□ 0.55
TRIM3-215ENST00000639856 A0A0G2JS52 829 aa18.47■□□□□ 0.55
TRIM3-215ENST00000639856 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
TRIM3-215ENST00000639856 ZNF330Q9Y3S2 320 aaPredicted RBP18.47■□□□□ 0.55
TRIM3-215ENST00000639856 FAM98CQ17RN3 349 aaKnown RBP18.46■□□□□ 0.55
TRIM3-215ENST00000639856 PA2G4Q9UQ80 394 aaKnown RBP18.46■□□□□ 0.55
TRIM3-215ENST00000639856 AOX1Q06278 1338 aa18.46■□□□□ 0.55
TRIM3-215ENST00000639856 EPHA10Q5JZY3 1008 aa18.46■□□□□ 0.55
TRIM3-215ENST00000639856 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
TRIM3-215ENST00000639856 UBE3BQ7Z3V4 1068 aa18.45■□□□□ 0.54
TRIM3-215ENST00000639856 RHPN1Q8TCX5 695 aa18.45■□□□□ 0.54
TRIM3-215ENST00000639856 TJP1Q07157 1748 aa18.44■□□□□ 0.54
TRIM3-215ENST00000639856 HDAC5Q9UQL6 1122 aa18.44■□□□□ 0.54
TRIM3-215ENST00000639856 TEX13AQ9BXU3 409 aaPredicted RBP18.44■□□□□ 0.54
TRIM3-215ENST00000639856 A0A087WZG4 1122 aa18.43■□□□□ 0.54
TRIM3-215ENST00000639856 STARD3NLO95772 234 aa18.43■□□□□ 0.54
TRIM3-215ENST00000639856 VPS72Q15906 364 aa18.43■□□□□ 0.54
TRIM3-215ENST00000639856 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
TRIM3-215ENST00000639856 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
TRIM3-215ENST00000639856 TRIM6-TRIM34B2RNG4 842 aa18.42■□□□□ 0.54
TRIM3-215ENST00000639856 CYP19A1P11511 503 aaPredicted RBP18.42■□□□□ 0.54
TRIM3-215ENST00000639856 OS9Q13438 667 aaPredicted RBP18.42■□□□□ 0.54
TRIM3-215ENST00000639856 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
TRIM3-215ENST00000639856 FNBP4Q8N3X1 1017 aaPredicted RBP18.42■□□□□ 0.54
TRIM3-215ENST00000639856 ESYT1Q9BSJ8 1104 aa18.42■□□□□ 0.54
TRIM3-215ENST00000639856 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
TRIM3-215ENST00000639856 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
TRIM3-215ENST00000639856 CASP7P55210 303 aa18.41■□□□□ 0.54
TRIM3-215ENST00000639856 RILPL2Q969X0 211 aa18.41■□□□□ 0.54
TRIM3-215ENST00000639856 HSPA1LP34931 641 aa18.41■□□□□ 0.54
TRIM3-215ENST00000639856 CHMLP26374 656 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms