RNA–Protein interactions for RNA: ENST00000639603.1

STRADA-238, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-238	ENST00000639603	TMEM88B	A6NKF7	163 aa		10.28	□□□□□ -0.76
STRADA-238	ENST00000639603	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
STRADA-238	ENST00000639603	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.28	□□□□□ -0.76
STRADA-238	ENST00000639603	C21orf2	O43822	256 aa		10.27	□□□□□ -0.77
STRADA-238	ENST00000639603	STARD3NL	O95772	234 aa		10.27	□□□□□ -0.77
STRADA-238	ENST00000639603	POTEI	P0CG38	1075 aa		10.27	□□□□□ -0.77
STRADA-238	ENST00000639603	POTEJ	P0CG39	1038 aa		10.27	□□□□□ -0.77
STRADA-238	ENST00000639603	CNKSR1	Q969H4	720 aa		10.27	□□□□□ -0.77
STRADA-238	ENST00000639603	RNMT	O43148	476 aa	Known RBP	10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	DDN	O94850	711 aa	Predicted RBP	10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	CANX	P27824	592 aa	Known RBP	10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	VEGFB	P49765	207 aa		10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	EIF5	P55010	431 aa	Known RBP	10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	STYK1	Q6J9G0	422 aa		10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	CHRDL2	Q6WN34	429 aa		10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	WBP1L	Q9NX94	342 aa		10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	PCDH10	Q9P2E7	1040 aa		10.26	□□□□□ -0.77
STRADA-238	ENST00000639603	LAMB4	A4D0S4	1761 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	RASSF10	A6NK89	507 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	NPHP1	O15259	732 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	ST5	P78524	1137 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	MAP2K1	Q02750	393 aa	Predicted RBP	10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	SLC39A6	Q13433	755 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	TBC1D9B	Q66K14	1250 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	PRR5L	Q6MZQ0	368 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	BICDL1	Q6ZP65	573 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	MORC1	Q86VD1	984 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	TTC5	Q8N0Z6	440 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	MIER1	Q8N108	512 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	PLCD3	Q8N3E9	789 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	CNBD1	Q8NA66	436 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	ABHD8	Q96I13	439 aa		10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.25	□□□□□ -0.77
STRADA-238	ENST00000639603	IL13	P35225	146 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	FXR2	P51116	673 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	LBX1	P52954	281 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	FAM161A	Q3B820	660 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	PRPF40B	Q6NWY9	871 aa	Known RBP	10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	NPM2	Q86SE8	214 aa	Known RBP	10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	PNMA8A	Q86V59	439 aa	Predicted RBP	10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	MASTL	Q96GX5	879 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	POLR3GL	Q9BT43	218 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	LGR6	Q9HBX8	967 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	HACL1	Q9UJ83	578 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	HEG1	Q9ULI3	1381 aa		10.24	□□□□□ -0.77
STRADA-238	ENST00000639603	ITGBL1	O95965	494 aa	Predicted RBP	10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	SRGN	P10124	158 aa		10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	HSPA8	P11142	646 aa	Known RBP	10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	IL6ST	P40189	918 aa	Predicted RBP	10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	CCDC93	Q567U6	631 aa		10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	EAPP	Q56P03	285 aa	Predicted RBP	10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	SETDB2	Q96T68	719 aa		10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	TIMELESS	Q9UNS1	1208 aa		10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	LTBP1	Q14766	1721 aa		10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	NUP98	P52948	1817 aa		10.23	□□□□□ -0.77
STRADA-238	ENST00000639603	EPHX2	P34913	555 aa		10.22	□□□□□ -0.77
STRADA-238	ENST00000639603	MLLT1	Q03111	559 aa	Predicted RBP	10.22	□□□□□ -0.77
STRADA-238	ENST00000639603	DEFB115	Q30KQ5	88 aa		10.22	□□□□□ -0.77
STRADA-238	ENST00000639603	CASP8AP2	Q9UKL3	1982 aa		10.21	□□□□□ -0.77
STRADA-238	ENST00000639603	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
STRADA-238	ENST00000639603	BEGAIN	Q9BUH8	593 aa		10.21	□□□□□ -0.77
STRADA-238	ENST00000639603	PANK3	Q9H999	370 aa		10.21	□□□□□ -0.77
STRADA-238	ENST00000639603	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.21	□□□□□ -0.77
STRADA-238	ENST00000639603	WDR33	Q9C0J8	1336 aa	Known RBP	10.21	□□□□□ -0.78
STRADA-238	ENST00000639603	NPR1	P16066	1061 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	ECE1	P42892	770 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	RGS19	P49795	217 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	TEF	Q10587	303 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	RTKN2	Q8IZC4	609 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	CNTROB	Q8N137	903 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	ZNF541	Q9H0D2	1346 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	ZNF652	Q9Y2D9	606 aa		10.2	□□□□□ -0.78
STRADA-238	ENST00000639603	CAMTA2	O94983	1202 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	MTHFSD	Q2M296	383 aa	Known RBP	10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	ZNF790	Q6PG37	636 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	GPC2	Q8N158	579 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	CCDC24	Q8N4L8	307 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	C7orf43	Q8WVR3	580 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	ZNF496	Q96IT1	587 aa	Predicted RBP	10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	FMNL2	Q96PY5	1086 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	ABT1	Q9ULW3	272 aa	Known RBP	10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	TBC1D2B	Q9UPU7	963 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	KNSTRN	Q9Y448	316 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	AKAP11	Q9UKA4	1901 aa		10.19	□□□□□ -0.78
STRADA-238	ENST00000639603	RNF123	Q5XPI4	1314 aa		10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	FZD9	O00144	591 aa		10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	RGL2	O15211	777 aa		10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	HMOX1	P09601	288 aa		10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	IARS	P41252	1262 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	CLEC4G	Q6UXB4	293 aa		10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	DZIP3	Q86Y13	1208 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-238	ENST00000639603	KLRG2	A4D1S0	409 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	LMOD1	P29536	600 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	MNX1	P50219	401 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
STRADA-238	ENST00000639603	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms