RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
TARDBP-231ENST00000639599 NFKBIEO00221 500 aa19.43■□□□□ 0.7
TARDBP-231ENST00000639599 IFFO2Q5TF58 517 aa19.43■□□□□ 0.7
TARDBP-231ENST00000639599 AFDNP55196 1824 aaKnown RBP19.43■□□□□ 0.7
TARDBP-231ENST00000639599 TPTE2Q6XPS3 522 aa19.42■□□□□ 0.7
TARDBP-231ENST00000639599 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.7
TARDBP-231ENST00000639599 FAM177BA6PVY3 158 aa19.41■□□□□ 0.7
TARDBP-231ENST00000639599 PRPF40BQ6NWY9 871 aaKnown RBP19.41■□□□□ 0.7
TARDBP-231ENST00000639599 SRGNP10124 158 aa19.4■□□□□ 0.7
TARDBP-231ENST00000639599 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
TARDBP-231ENST00000639599 SIPA1L3O60292 1781 aaPredicted RBP19.39■□□□□ 0.7
TARDBP-231ENST00000639599 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
TARDBP-231ENST00000639599 NGEFQ8N5V2 710 aa19.39■□□□□ 0.69
TARDBP-231ENST00000639599 MIS18AQ9NYP9 233 aa19.39■□□□□ 0.69
TARDBP-231ENST00000639599 RGL2O15211 777 aa19.38■□□□□ 0.69
TARDBP-231ENST00000639599 NPR1P16066 1061 aa19.38■□□□□ 0.69
TARDBP-231ENST00000639599 CCDC93Q567U6 631 aa19.38■□□□□ 0.69
TARDBP-231ENST00000639599 DLEC1Q9Y238 1755 aa19.38■□□□□ 0.69
TARDBP-231ENST00000639599 LTBP3Q9NS15 1303 aa19.37■□□□□ 0.69
TARDBP-231ENST00000639599 KLRG1Q96E93 195 aa19.37■□□□□ 0.69
TARDBP-231ENST00000639599 PRELPP51888 382 aa19.36■□□□□ 0.69
TARDBP-231ENST00000639599 HTRA3P83110 453 aa19.36■□□□□ 0.69
TARDBP-231ENST00000639599 NFE2L2Q16236 605 aa19.36■□□□□ 0.69
TARDBP-231ENST00000639599 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
TARDBP-231ENST00000639599 NBPF26B4DH59 902 aa19.35■□□□□ 0.69
TARDBP-231ENST00000639599 NBPF10Q6P3W6 841 aaKnown RBP19.35■□□□□ 0.69
TARDBP-231ENST00000639599 NBPF15Q8N660 670 aa19.35■□□□□ 0.69
TARDBP-231ENST00000639599 DNAJC5GQ8N7S2 189 aa19.35■□□□□ 0.69
TARDBP-231ENST00000639599 RRP7AQ9Y3A4 280 aaKnown RBP19.35■□□□□ 0.69
TARDBP-231ENST00000639599 ALDH1B1P30837 517 aa19.34■□□□□ 0.69
TARDBP-231ENST00000639599 MYL6BP14649 208 aa19.33■□□□□ 0.68
TARDBP-231ENST00000639599 RTKN2Q8IZC4 609 aa19.33■□□□□ 0.68
TARDBP-231ENST00000639599 BCORQ6W2J9 1755 aa19.32■□□□□ 0.68
TARDBP-231ENST00000639599 TIAM2Q8IVF5 1701 aa19.32■□□□□ 0.68
TARDBP-231ENST00000639599 IQCA1LA6NCM1 817 aa19.32■□□□□ 0.68
TARDBP-231ENST00000639599 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
TARDBP-231ENST00000639599 THUMPD2Q9BTF0 503 aaKnown RBP19.32■□□□□ 0.68
TARDBP-231ENST00000639599 TSPYL4Q9UJ04 414 aa19.32■□□□□ 0.68
TARDBP-231ENST00000639599 WDR90Q96KV7 1748 aa19.31■□□□□ 0.68
TARDBP-231ENST00000639599 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
TARDBP-231ENST00000639599 EIF4A1P60842 406 aaKnown RBP19.31■□□□□ 0.68
TARDBP-231ENST00000639599 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
TARDBP-231ENST00000639599 HLFQ16534 295 aa19.31■□□□□ 0.68
TARDBP-231ENST00000639599 RPGRQ92834 1020 aaKnown RBP19.31■□□□□ 0.68
TARDBP-231ENST00000639599 MAP3K15Q6ZN16 1313 aa19.3■□□□□ 0.68
TARDBP-231ENST00000639599 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
TARDBP-231ENST00000639599 RALBP1Q15311 655 aa19.3■□□□□ 0.68
TARDBP-231ENST00000639599 PLEKHF1Q96S99 279 aa19.3■□□□□ 0.68
TARDBP-231ENST00000639599 TMX4Q9H1E5 349 aaPredicted RBP19.3■□□□□ 0.68
TARDBP-231ENST00000639599 ZBTB3Q9H5J0 574 aa19.3■□□□□ 0.68
TARDBP-231ENST00000639599 COL11A2P13942 1736 aaPredicted RBP19.3■□□□□ 0.68
TARDBP-231ENST00000639599 SBF1O95248 1867 aa19.3■□□□□ 0.68
TARDBP-231ENST00000639599 ANKRD31Q8N7Z5 1873 aa19.3■□□□□ 0.68
TARDBP-231ENST00000639599 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
TARDBP-231ENST00000639599 RIPK4P57078 832 aa19.28■□□□□ 0.68
TARDBP-231ENST00000639599 CHADLQ6NUI6 762 aa19.28■□□□□ 0.68
TARDBP-231ENST00000639599 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
TARDBP-231ENST00000639599 ZNF277Q9NRM2 450 aaPredicted RBP19.28■□□□□ 0.68
TARDBP-231ENST00000639599 ERBB4Q15303 1308 aa19.27■□□□□ 0.68
TARDBP-231ENST00000639599 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
TARDBP-231ENST00000639599 EIF2S2P20042 333 aaKnown RBP19.27■□□□□ 0.68
TARDBP-231ENST00000639599 GPTP24298 496 aa19.27■□□□□ 0.68
TARDBP-231ENST00000639599 TTLL7Q6ZT98 887 aa19.26■□□□□ 0.67
TARDBP-231ENST00000639599 PPP1R42Q7Z4L9 355 aa19.26■□□□□ 0.67
TARDBP-231ENST00000639599 JMYQ8N9B5 988 aa19.26■□□□□ 0.67
TARDBP-231ENST00000639599 JDP2Q8WYK2 163 aa19.26■□□□□ 0.67
TARDBP-231ENST00000639599 WDR43Q15061 677 aaKnown RBP eCLIP19.25■□□□□ 0.67
TARDBP-231ENST00000639599 EAPPQ56P03 285 aaPredicted RBP19.25■□□□□ 0.67
TARDBP-231ENST00000639599 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
TARDBP-231ENST00000639599 RBM17Q96I25 401 aaKnown RBP19.25■□□□□ 0.67
TARDBP-231ENST00000639599 LAMB4A4D0S4 1761 aa19.24■□□□□ 0.67
TARDBP-231ENST00000639599 POTECB2RU33 542 aa19.24■□□□□ 0.67
TARDBP-231ENST00000639599 IARSP41252 1262 aaKnown RBP19.24■□□□□ 0.67
TARDBP-231ENST00000639599 PARP10Q53GL7 1025 aa19.24■□□□□ 0.67
TARDBP-231ENST00000639599 SYNE4Q8N205 404 aa19.24■□□□□ 0.67
TARDBP-231ENST00000639599 C7orf43Q8WVR3 580 aa19.24■□□□□ 0.67
TARDBP-231ENST00000639599 CLEC11AQ9Y240 323 aa19.24■□□□□ 0.67
TARDBP-231ENST00000639599 ABCC12Q96J65 1359 aa19.23■□□□□ 0.67
TARDBP-231ENST00000639599 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
TARDBP-231ENST00000639599 EIF6P56537 245 aaKnown RBP19.23■□□□□ 0.67
TARDBP-231ENST00000639599 GRIPAP1Q4V328 841 aa19.23■□□□□ 0.67
TARDBP-231ENST00000639599 LDHDQ86WU2 507 aa19.23■□□□□ 0.67
TARDBP-231ENST00000639599 HACL1Q9UJ83 578 aa19.23■□□□□ 0.67
TARDBP-231ENST00000639599 SLX4Q8IY92 1834 aa19.23■□□□□ 0.67
TARDBP-231ENST00000639599 NEUROD2Q15784 382 aa19.22■□□□□ 0.67
TARDBP-231ENST00000639599 OLFM4Q6UX06 510 aa19.22■□□□□ 0.67
TARDBP-231ENST00000639599 GIGYF2Q6Y7W6 1299 aaKnown RBP19.22■□□□□ 0.67
TARDBP-231ENST00000639599 L3MBTL3Q96JM7 780 aaPredicted RBP19.22■□□□□ 0.67
TARDBP-231ENST00000639599 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
TARDBP-231ENST00000639599 FER1L6Q2WGJ9 1857 aa19.22■□□□□ 0.67
TARDBP-231ENST00000639599 PPEF1O14829 653 aaPredicted RBP19.21■□□□□ 0.67
TARDBP-231ENST00000639599 CRY2Q49AN0 593 aa19.21■□□□□ 0.67
TARDBP-231ENST00000639599 SUSD4Q5VX71 490 aa19.21■□□□□ 0.67
TARDBP-231ENST00000639599 NLRP3Q96P20 1036 aa19.21■□□□□ 0.67
TARDBP-231ENST00000639599 PSMD1Q99460 953 aa19.21■□□□□ 0.67
TARDBP-231ENST00000639599 TAF1DQ9H5J8 278 aaPredicted RBP19.21■□□□□ 0.67
TARDBP-231ENST00000639599 CREBZFQ9NS37 354 aa19.21■□□□□ 0.67
TARDBP-231ENST00000639599 LAS1LQ9Y4W2 734 aaKnown RBP19.21■□□□□ 0.67
TARDBP-231ENST00000639599 MYBBP1AQ9BQG0 1328 aaKnown RBP19.21■□□□□ 0.67
TARDBP-231ENST00000639599 ZNF541Q9H0D2 1346 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms