RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.16
SCARB2-215ENST00000639145 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
SCARB2-215ENST00000639145 R3HCC1Q9Y3T6 440 aaKnown RBP16.08■□□□□ 0.16
SCARB2-215ENST00000639145 TRAK2O60296 914 aa16.07■□□□□ 0.16
SCARB2-215ENST00000639145 CCDC83Q8IWF9 413 aa16.07■□□□□ 0.16
SCARB2-215ENST00000639145 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
SCARB2-215ENST00000639145 ZNF444Q8N0Y2 327 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-215ENST00000639145 SBNO1A3KN83 1393 aa16.07■□□□□ 0.16
SCARB2-215ENST00000639145 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
SCARB2-215ENST00000639145 COL17A1Q9UMD9 1497 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-215ENST00000639145 CDKL5O76039 1030 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 JMYQ8N9B5 988 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
SCARB2-215ENST00000639145 F8W031 263 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-215ENST00000639145 G2E3Q7L622 706 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 UTP14AQ9BVJ6 771 aaKnown RBP16.06■□□□□ 0.16
SCARB2-215ENST00000639145 SPATA31E1Q6ZUB1 1445 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 A1BGP04217 495 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 TTLL12Q14166 644 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-215ENST00000639145 EVI5LQ96CN4 794 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 ZFYVE9O95405 1425 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 ZSCAN31Q96LW9 406 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-215ENST00000639145 USP21Q9UK80 565 aa16.06■□□□□ 0.16
SCARB2-215ENST00000639145 KRT85P78386 507 aa16.05■□□□□ 0.16
SCARB2-215ENST00000639145 TMEM132AQ24JP5 1023 aa16.05■□□□□ 0.16
SCARB2-215ENST00000639145 ZNF592Q92610 1267 aa16.05■□□□□ 0.16
SCARB2-215ENST00000639145 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
SCARB2-215ENST00000639145 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCARB2-215ENST00000639145 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
SCARB2-215ENST00000639145 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-215ENST00000639145 IRS4O14654 1257 aaPredicted RBP16.05■□□□□ 0.16
SCARB2-215ENST00000639145 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
SCARB2-215ENST00000639145 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
SCARB2-215ENST00000639145 FAM89AQ96GI7 184 aa16.05■□□□□ 0.16
SCARB2-215ENST00000639145 ANKRD44Q8N8A2 993 aa16.04■□□□□ 0.16
SCARB2-215ENST00000639145 MBD3O95983 291 aa16.04■□□□□ 0.16
SCARB2-215ENST00000639145 LDHCP07864 332 aa16.04■□□□□ 0.16
SCARB2-215ENST00000639145 IFIT3O14879 490 aaKnown RBP16.03■□□□□ 0.16
SCARB2-215ENST00000639145 PIK3C2GO75747 1445 aa16.03■□□□□ 0.16
SCARB2-215ENST00000639145 GUCY1B3Q02153 619 aa16.03■□□□□ 0.16
SCARB2-215ENST00000639145 WDR78Q5VTH9 848 aa16.03■□□□□ 0.16
SCARB2-215ENST00000639145 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
SCARB2-215ENST00000639145 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
SCARB2-215ENST00000639145 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
SCARB2-215ENST00000639145 PTPRTO14522 1441 aa16.02■□□□□ 0.16
SCARB2-215ENST00000639145 ATP8B2P98198 1209 aa16.02■□□□□ 0.16
SCARB2-215ENST00000639145 CCDC96Q2M329 555 aa16.02■□□□□ 0.16
SCARB2-215ENST00000639145 SLF2Q8IX21 1173 aa16.02■□□□□ 0.16
SCARB2-215ENST00000639145 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
SCARB2-215ENST00000639145 ARHGEF10O15013 1369 aa16.02■□□□□ 0.16
SCARB2-215ENST00000639145 MAGI2Q86UL8 1455 aa16.02■□□□□ 0.15
SCARB2-215ENST00000639145 OFD1O75665 1012 aa16.02■□□□□ 0.15
SCARB2-215ENST00000639145 RAB11FIP4Q86YS3 637 aa16.02■□□□□ 0.15
SCARB2-215ENST00000639145 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-215ENST00000639145 NOL7Q9UMY1 257 aaKnown RBP16.02■□□□□ 0.15
SCARB2-215ENST00000639145 ZNF76P36508 570 aa16.02■□□□□ 0.15
SCARB2-215ENST00000639145 EPS15P42566 896 aa16.02■□□□□ 0.15
SCARB2-215ENST00000639145 CCT2P78371 535 aaKnown RBP16.02■□□□□ 0.15
SCARB2-215ENST00000639145 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.15
SCARB2-215ENST00000639145 CDCA7Q9BWT1 371 aaPredicted RBP16.02■□□□□ 0.15
SCARB2-215ENST00000639145 PRM3Q9NNZ6 103 aa16.02■□□□□ 0.15
SCARB2-215ENST00000639145 IL15P40933 162 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-215ENST00000639145 BRPF1P55201 1214 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-215ENST00000639145 TTF1Q15361 905 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-215ENST00000639145 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
SCARB2-215ENST00000639145 PAXIP1Q6ZW49 1069 aaPredicted RBP16.01■□□□□ 0.15
SCARB2-215ENST00000639145 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
SCARB2-215ENST00000639145 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
SCARB2-215ENST00000639145 BAG3O95817 575 aa16.01■□□□□ 0.15
SCARB2-215ENST00000639145 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
SCARB2-215ENST00000639145 BMP2KLQ5H9B9 411 aa16.01■□□□□ 0.15
SCARB2-215ENST00000639145 PDILTQ8N807 584 aa16.01■□□□□ 0.15
SCARB2-215ENST00000639145 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
SCARB2-215ENST00000639145 HCLS1P14317 486 aaPredicted RBP16■□□□□ 0.15
SCARB2-215ENST00000639145 NBPF14Q5TI25 921 aa16■□□□□ 0.15
SCARB2-215ENST00000639145 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
SCARB2-215ENST00000639145 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
SCARB2-215ENST00000639145 PRDM15P57071 1507 aaPredicted RBP16■□□□□ 0.15
SCARB2-215ENST00000639145 PDE1AP54750 535 aa16■□□□□ 0.15
SCARB2-215ENST00000639145 SPATA32Q96LK8 384 aa16■□□□□ 0.15
SCARB2-215ENST00000639145 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
SCARB2-215ENST00000639145 PARP3Q9Y6F1 533 aa16■□□□□ 0.15
SCARB2-215ENST00000639145 CYP7A1P22680 504 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 CCDC144CPQ8IYA2 1237 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 FEZ1Q99689 392 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 TRIM5Q9C035 493 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 TRIM35Q9UPQ4 493 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 SLC12A7Q9Y666 1083 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 TSPY2A6NKD2 308 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 SDSP20132 328 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 TCEANC2Q96MN5 208 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 SLC52A2Q9HAB3 445 aa15.99■□□□□ 0.15
SCARB2-215ENST00000639145 ZNF335Q9H4Z2 1342 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-215ENST00000639145 STX8Q9UNK0 236 aa15.98■□□□□ 0.15
SCARB2-215ENST00000639145 HDAC1Q13547 482 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-215ENST00000639145 NYXQ9GZU5 481 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms