RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 RRP15Q9Y3B9 282 aaKnown RBP9.37□□□□□ -0.91
CDKL5-211ENST00000637881 CCDC171Q6TFL3 1326 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 CCDC189A1A4V9 331 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 CD2BP2O95400 341 aaKnown RBP9.37□□□□□ -0.91
CDKL5-211ENST00000637881 PSME1Q06323 249 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 ZSCAN26Q16670 478 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 GPATCH11Q8N954 259 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 CCDC191Q8NCU4 936 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 PPM1EQ8WY54 764 aa9.37□□□□□ -0.91
CDKL5-211ENST00000637881 KIF2AO00139 706 aaPredicted RBP9.36□□□□□ -0.91
CDKL5-211ENST00000637881 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
CDKL5-211ENST00000637881 H2AFXP16104 143 aaPredicted RBP9.36□□□□□ -0.91
CDKL5-211ENST00000637881 MVPQ14764 893 aaKnown RBP9.36□□□□□ -0.91
CDKL5-211ENST00000637881 C11orf91Q3C1V1 193 aa9.36□□□□□ -0.91
CDKL5-211ENST00000637881 EP400NLQ6ZTU2 488 aa9.36□□□□□ -0.91
CDKL5-211ENST00000637881 AK7Q96M32 723 aa9.36□□□□□ -0.91
CDKL5-211ENST00000637881 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
CDKL5-211ENST00000637881 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
CDKL5-211ENST00000637881 NALCNQ8IZF0 1738 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 TNNT1P13805 278 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 CCDC183Q5T5S1 534 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 LRCH2Q5VUJ6 765 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 FBXO38Q6PIJ6 1188 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 FAM43BQ6ZT52 329 aaPredicted RBP9.35□□□□□ -0.91
CDKL5-211ENST00000637881 BRINP3Q76B58 766 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 JMYQ8N9B5 988 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 TBC1D22AQ8WUA7 517 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 SH3BP1Q9Y3L3 701 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 ACEP12821 1306 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 SBNO2Q9Y2G9 1366 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 PPIP5K1Q6PFW1 1433 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 LIG1P18858 919 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 PPP2R1AP30153 589 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 RARSP54136 660 aaKnown RBP9.35□□□□□ -0.91
CDKL5-211ENST00000637881 NBPF6Q5VWK0 638 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 MMS22LQ6ZRQ5 1243 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 HDGFL2Q7Z4V5 671 aaPredicted RBP9.35□□□□□ -0.91
CDKL5-211ENST00000637881 NBPF5PQ86XG9 351 aaPredicted RBP9.35□□□□□ -0.91
CDKL5-211ENST00000637881 NBPF4Q96M43 638 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 DRC1Q96MC2 740 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 ELP1O95163 1332 aa9.35□□□□□ -0.91
CDKL5-211ENST00000637881 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 RPS6KA5O75582 802 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 MAP2K2P36507 400 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 NUTM2GQ5VZR2 741 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
CDKL5-211ENST00000637881 TMEM87AQ8NBN3 555 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 ANKRD20A12PQ8NF67 263 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 EXOC4Q96A65 974 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 TERF2IPQ9NYB0 399 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
CDKL5-211ENST00000637881 XIRP1Q702N8 1843 aaKnown RBP9.33□□□□□ -0.92
CDKL5-211ENST00000637881 MST1RQ04912 1400 aa9.33□□□□□ -0.92
CDKL5-211ENST00000637881 KLHL33A6NCF5 533 aa9.33□□□□□ -0.92
CDKL5-211ENST00000637881 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-211ENST00000637881 GYS2P54840 703 aa9.33□□□□□ -0.92
CDKL5-211ENST00000637881 NUCB1Q02818 461 aa9.33□□□□□ -0.92
CDKL5-211ENST00000637881 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
CDKL5-211ENST00000637881 SGSM3Q96HU1 749 aa9.33□□□□□ -0.92
CDKL5-211ENST00000637881 TMX1Q9H3N1 280 aa9.33□□□□□ -0.92
CDKL5-211ENST00000637881 ARGLU1Q9NWB6 273 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-211ENST00000637881 IRF6O14896 467 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 TRIM66O15016 1216 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 SLU7O95391 586 aaKnown RBP9.32□□□□□ -0.92
CDKL5-211ENST00000637881 PNMA6AP0CW24 399 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-211ENST00000637881 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 NEK11Q8NG66 645 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 FAM210AQ96ND0 272 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 KCND1Q9NSA2 647 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 ZDHHC9Q9Y397 364 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 ST18O60284 1047 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 NEMFO60524 1076 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 TUBB4AP04350 444 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 USP8P40818 1118 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 PLA2G4AP47712 749 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 SEMA3FQ13275 785 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 PACS2Q86VP3 889 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 STAG1Q8WVM7 1258 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 PUS7Q96PZ0 661 aaKnown RBP9.32□□□□□ -0.92
CDKL5-211ENST00000637881 TOMM22Q9NS69 142 aa9.32□□□□□ -0.92
CDKL5-211ENST00000637881 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
CDKL5-211ENST00000637881 MED1Q15648 1581 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-211ENST00000637881 DCCP43146 1447 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 SGSM2O43147 1006 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 ZRANB2O95218 330 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDKL5-211ENST00000637881 BRD1O95696 1058 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 ITFG2Q969R8 447 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 CARD14Q9BXL6 1004 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 FAM107BQ9H098 131 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 ST7Q9NRC1 585 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 LCMT1Q9UIC8 334 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 DDX19BQ9UMR2 479 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 ATP7BP35670 1465 aa9.31□□□□□ -0.92
CDKL5-211ENST00000637881 CDC42BPGQ6DT37 1551 aa9.3□□□□□ -0.92
CDKL5-211ENST00000637881 RGPD8O14715 1765 aaPredicted RBP9.3□□□□□ -0.92
CDKL5-211ENST00000637881 C21orf2O43822 256 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms