RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
SCN8A-214ENST00000637709 KIF1BPQ96EK5 621 aa18.81■□□□□ 0.6
SCN8A-214ENST00000637709 ADAMTS2O95450 1211 aa18.81■□□□□ 0.6
SCN8A-214ENST00000637709 NEXNQ0ZGT2 675 aa18.81■□□□□ 0.6
SCN8A-214ENST00000637709 ZBTB3Q9H5J0 574 aa18.81■□□□□ 0.6
SCN8A-214ENST00000637709 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
SCN8A-214ENST00000637709 ERC2O15083 957 aa18.8■□□□□ 0.6
SCN8A-214ENST00000637709 GCKRQ14397 625 aa18.8■□□□□ 0.6
SCN8A-214ENST00000637709 ANO2Q9NQ90 1003 aa18.8■□□□□ 0.6
SCN8A-214ENST00000637709 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
SCN8A-214ENST00000637709 MRC1P22897 1456 aa18.8■□□□□ 0.6
SCN8A-214ENST00000637709 NOL8Q76FK4 1167 aaKnown RBP18.8■□□□□ 0.6
SCN8A-214ENST00000637709 PI4K2BQ8TCG2 481 aa18.8■□□□□ 0.6
SCN8A-214ENST00000637709 METTL22Q9BUU2 404 aaPredicted RBP18.8■□□□□ 0.6
SCN8A-214ENST00000637709 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
SCN8A-214ENST00000637709 CHMLP26374 656 aa18.79■□□□□ 0.6
SCN8A-214ENST00000637709 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
SCN8A-214ENST00000637709 CCDC8Q9H0W5 538 aaPredicted RBP18.79■□□□□ 0.6
SCN8A-214ENST00000637709 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
SCN8A-214ENST00000637709 ASAP1Q9ULH1 1129 aa18.79■□□□□ 0.6
SCN8A-214ENST00000637709 NHSL1Q5SYE7 1610 aa18.79■□□□□ 0.6
SCN8A-214ENST00000637709 PALD1Q9ULE6 856 aa18.79■□□□□ 0.6
SCN8A-214ENST00000637709 GLI3P10071 1580 aa18.79■□□□□ 0.6
SCN8A-214ENST00000637709 ESYT1Q9BSJ8 1104 aa18.78■□□□□ 0.6
SCN8A-214ENST00000637709 RAB11FIP3O75154 756 aa18.78■□□□□ 0.6
SCN8A-214ENST00000637709 AACSQ86V21 672 aa18.78■□□□□ 0.6
SCN8A-214ENST00000637709 SASH1O94885 1247 aa18.77■□□□□ 0.6
SCN8A-214ENST00000637709 STAP2Q9UGK3 403 aa18.77■□□□□ 0.6
SCN8A-214ENST00000637709 CHMP3Q9Y3E7 222 aa18.77■□□□□ 0.6
SCN8A-214ENST00000637709 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.6
SCN8A-214ENST00000637709 ARFGEF2Q9Y6D5 1785 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 A0A087WZG4 1122 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 K7ELQ4 463 aaPredicted RBP18.76■□□□□ 0.59
SCN8A-214ENST00000637709 SNX21Q969T3 373 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 ABCC6O95255 1503 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 REC8O95072 547 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 PIP4K2BP78356 416 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
SCN8A-214ENST00000637709 NUTM2BA6NNL0 878 aaPredicted RBP18.75■□□□□ 0.59
SCN8A-214ENST00000637709 NUTM2EB1AL46 878 aaPredicted RBP18.75■□□□□ 0.59
SCN8A-214ENST00000637709 CWC27Q6UX04 472 aaKnown RBP18.75■□□□□ 0.59
SCN8A-214ENST00000637709 NUTM2AQ8IVF1 878 aaPredicted RBP18.75■□□□□ 0.59
SCN8A-214ENST00000637709 MTX1Q13505 466 aa18.75■□□□□ 0.59
SCN8A-214ENST00000637709 CLASRPQ8N2M8 674 aaKnown RBP18.75■□□□□ 0.59
SCN8A-214ENST00000637709 EAF2Q96CJ1 260 aaPredicted RBP18.75■□□□□ 0.59
SCN8A-214ENST00000637709 TMOD3Q9NYL9 352 aa18.75■□□□□ 0.59
SCN8A-214ENST00000637709 PIGBQ92521 554 aa18.74■□□□□ 0.59
SCN8A-214ENST00000637709 IFIT2P09913 472 aaKnown RBP18.74■□□□□ 0.59
SCN8A-214ENST00000637709 CCDC85AQ96PX6 553 aaPredicted RBP18.74■□□□□ 0.59
SCN8A-214ENST00000637709 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
SCN8A-214ENST00000637709 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
SCN8A-214ENST00000637709 KCPQ6ZWJ8 1503 aa18.73■□□□□ 0.59
SCN8A-214ENST00000637709 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
SCN8A-214ENST00000637709 EDC3Q96F86 508 aaKnown RBP18.72■□□□□ 0.59
SCN8A-214ENST00000637709 UPF3BQ9BZI7 483 aaKnown RBP18.72■□□□□ 0.59
SCN8A-214ENST00000637709 UTYO14607 1347 aa18.72■□□□□ 0.59
SCN8A-214ENST00000637709 DNAJC10Q8IXB1 793 aa18.72■□□□□ 0.59
SCN8A-214ENST00000637709 DTNBO60941 627 aa18.71■□□□□ 0.59
SCN8A-214ENST00000637709 RABEP1Q15276 862 aa18.71■□□□□ 0.59
SCN8A-214ENST00000637709 GZF1Q9H116 711 aaPredicted RBP18.71■□□□□ 0.59
SCN8A-214ENST00000637709 LAMB4A4D0S4 1761 aa18.71■□□□□ 0.59
SCN8A-214ENST00000637709 NEK4P51957 841 aa18.71■□□□□ 0.58
SCN8A-214ENST00000637709 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.58
SCN8A-214ENST00000637709 PLBD2Q8NHP8 589 aa18.71■□□□□ 0.58
SCN8A-214ENST00000637709 LARP6Q9BRS8 491 aaKnown RBP18.71■□□□□ 0.58
SCN8A-214ENST00000637709 BOLA2Q9H3K6 86 aa18.71■□□□□ 0.58
SCN8A-214ENST00000637709 GSE1Q14687 1217 aa18.7■□□□□ 0.58
SCN8A-214ENST00000637709 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
SCN8A-214ENST00000637709 ZGPATQ8N5A5 531 aaKnown RBP18.7■□□□□ 0.58
SCN8A-214ENST00000637709 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
SCN8A-214ENST00000637709 CHGBP05060 677 aa18.69■□□□□ 0.58
SCN8A-214ENST00000637709 PKP1Q13835 747 aa18.69■□□□□ 0.58
SCN8A-214ENST00000637709 LMBR1LQ6UX01 489 aa18.69■□□□□ 0.58
SCN8A-214ENST00000637709 DDIT3P35638 169 aa18.69■□□□□ 0.58
SCN8A-214ENST00000637709 CNTROBQ8N137 903 aa18.68■□□□□ 0.58
SCN8A-214ENST00000637709 TNPO1Q92973 898 aaKnown RBP18.68■□□□□ 0.58
SCN8A-214ENST00000637709 ZNF594Q96JF6 807 aaPredicted RBP18.68■□□□□ 0.58
SCN8A-214ENST00000637709 ECHDC1Q9NTX5 307 aa18.68■□□□□ 0.58
SCN8A-214ENST00000637709 TFCP2Q12800 502 aa18.68■□□□□ 0.58
SCN8A-214ENST00000637709 SYNE4Q8N205 404 aa18.68■□□□□ 0.58
SCN8A-214ENST00000637709 EP400Q96L91 3159 aa18.68■□□□□ 0.58
SCN8A-214ENST00000637709 ITGB4P16144 1822 aa18.68■□□□□ 0.58
SCN8A-214ENST00000637709 PTPN12Q05209 780 aaKnown RBP18.67■□□□□ 0.58
SCN8A-214ENST00000637709 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
SCN8A-214ENST00000637709 ATG3Q9NT62 314 aa18.67■□□□□ 0.58
SCN8A-214ENST00000637709 SSFA2P28290 1259 aa18.67■□□□□ 0.58
SCN8A-214ENST00000637709 FOXD4L5Q5VV16 416 aaPredicted RBP18.67■□□□□ 0.58
SCN8A-214ENST00000637709 FOXD4L4Q8WXT5 416 aaPredicted RBP18.67■□□□□ 0.58
SCN8A-214ENST00000637709 CHAMP1Q96JM3 812 aa18.67■□□□□ 0.58
SCN8A-214ENST00000637709 SLC4A9Q96Q91 983 aa18.66■□□□□ 0.58
SCN8A-214ENST00000637709 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
SCN8A-214ENST00000637709 CPA1P15085 419 aa18.66■□□□□ 0.58
SCN8A-214ENST00000637709 MCM4P33991 863 aa18.66■□□□□ 0.58
SCN8A-214ENST00000637709 GPTP24298 496 aa18.65■□□□□ 0.58
SCN8A-214ENST00000637709 RFX5P48382 616 aaPredicted RBP18.65■□□□□ 0.58
SCN8A-214ENST00000637709 CASP7P55210 303 aa18.65■□□□□ 0.58
SCN8A-214ENST00000637709 AOX1Q06278 1338 aa18.65■□□□□ 0.58
SCN8A-214ENST00000637709 COL16A1Q07092 1604 aaPredicted RBP18.65■□□□□ 0.58
SCN8A-214ENST00000637709 FAM227BQ96M60 508 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms