RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 NHSQ6T4R5 1651 aa26.47■■□□□ 1.83
CLN8-213ENST00000637156 TJP1Q07157 1748 aa26.47■■□□□ 1.83
CLN8-213ENST00000637156 BRWD3Q6RI45 1802 aa26.47■■□□□ 1.83
CLN8-213ENST00000637156 GNAI2P04899 355 aa26.47■■□□□ 1.83
CLN8-213ENST00000637156 NEXNQ0ZGT2 675 aa26.47■■□□□ 1.83
CLN8-213ENST00000637156 IL6STP40189 918 aaPredicted RBP26.46■■□□□ 1.83
CLN8-213ENST00000637156 CEP85Q6P2H3 762 aa26.46■■□□□ 1.83
CLN8-213ENST00000637156 RPAP2Q8IXW5 612 aaPredicted RBP26.46■■□□□ 1.83
CLN8-213ENST00000637156 CCDC87Q9NVE4 849 aa26.46■■□□□ 1.83
CLN8-213ENST00000637156 ANKRD44Q8N8A2 993 aa26.45■■□□□ 1.83
CLN8-213ENST00000637156 ZBTB3Q9H5J0 574 aa26.45■■□□□ 1.83
CLN8-213ENST00000637156 NEURL1BA8MQ27 555 aa26.45■■□□□ 1.82
CLN8-213ENST00000637156 TRIM37O94972 964 aa26.45■■□□□ 1.82
CLN8-213ENST00000637156 EIF5P55010 431 aaKnown RBP26.45■■□□□ 1.82
CLN8-213ENST00000637156 SKAP1Q86WV1 359 aa26.45■■□□□ 1.82
CLN8-213ENST00000637156 LINC00116Q8NCU8 138 aa26.45■■□□□ 1.82
CLN8-213ENST00000637156 UBTFL1P0CB47 393 aaPredicted RBP26.44■■□□□ 1.82
CLN8-213ENST00000637156 SBF2Q86WG5 1849 aa26.44■■□□□ 1.82
CLN8-213ENST00000637156 ATP5J2-PTCD1G3V325 749 aa26.43■■□□□ 1.82
CLN8-213ENST00000637156 BTAF1O14981 1849 aa26.43■■□□□ 1.82
CLN8-213ENST00000637156 C9orf78Q9NZ63 289 aaPredicted RBP26.42■■□□□ 1.82
CLN8-213ENST00000637156 LRRFIP2Q9Y608 721 aaKnown RBP26.42■■□□□ 1.82
CLN8-213ENST00000637156 GCKRQ14397 625 aa26.42■■□□□ 1.82
CLN8-213ENST00000637156 ARXQ96QS3 562 aa26.42■■□□□ 1.82
CLN8-213ENST00000637156 CCNL1Q9UK58 526 aaPredicted RBP26.41■■□□□ 1.82
CLN8-213ENST00000637156 N4BP2Q86UW6 1770 aaPredicted RBP26.41■■□□□ 1.82
CLN8-213ENST00000637156 SMC5Q8IY18 1101 aa26.4■■□□□ 1.82
CLN8-213ENST00000637156 UTYO14607 1347 aa26.4■■□□□ 1.82
CLN8-213ENST00000637156 GRM8O00222 908 aa26.4■■□□□ 1.82
CLN8-213ENST00000637156 KIF6Q6ZMV9 814 aa26.4■■□□□ 1.82
CLN8-213ENST00000637156 TBC1D2BQ9UPU7 963 aa26.4■■□□□ 1.82
CLN8-213ENST00000637156 IBTKQ9P2D0 1353 aaPredicted RBP26.39■■□□□ 1.82
CLN8-213ENST00000637156 MAP3K15Q6ZN16 1313 aa26.39■■□□□ 1.82
CLN8-213ENST00000637156 ATP8B2P98198 1209 aa26.38■■□□□ 1.81
CLN8-213ENST00000637156 TCIRG1Q13488 830 aa26.38■■□□□ 1.81
CLN8-213ENST00000637156 HLFQ16534 295 aa26.38■■□□□ 1.81
CLN8-213ENST00000637156 CICQ96RK0 1608 aaPredicted RBP26.38■■□□□ 1.81
CLN8-213ENST00000637156 NPM2Q86SE8 214 aaKnown RBP26.38■■□□□ 1.81
CLN8-213ENST00000637156 ZNF831Q5JPB2 1677 aa26.37■■□□□ 1.81
CLN8-213ENST00000637156 DZIP3Q86Y13 1208 aaKnown RBP26.37■■□□□ 1.81
CLN8-213ENST00000637156 GIGYF2Q6Y7W6 1299 aaKnown RBP26.36■■□□□ 1.81
CLN8-213ENST00000637156 RC3H1Q5TC82 1133 aaKnown RBP26.36■■□□□ 1.81
CLN8-213ENST00000637156 MYH14Q7Z406 1995 aaKnown RBP26.36■■□□□ 1.81
CLN8-213ENST00000637156 KAZALD1Q96I82 304 aa26.36■■□□□ 1.81
CLN8-213ENST00000637156 ISCA1Q9BUE6 129 aa26.36■■□□□ 1.81
CLN8-213ENST00000637156 DCTPP1Q9H773 170 aa26.36■■□□□ 1.81
CLN8-213ENST00000637156 LRRC4BQ9NT99 713 aa26.36■■□□□ 1.81
CLN8-213ENST00000637156 CNTNAP4Q9C0A0 1308 aa26.35■■□□□ 1.81
CLN8-213ENST00000637156 PNMA6EA0A0J9YXQ4 647 aa26.35■■□□□ 1.81
CLN8-213ENST00000637156 ERVV-1B6SEH8 477 aa26.35■■□□□ 1.81
CLN8-213ENST00000637156 PDZRN3Q9UPQ7 1066 aa26.35■■□□□ 1.81
CLN8-213ENST00000637156 JARID2Q92833 1246 aaPredicted RBP26.34■■□□□ 1.81
CLN8-213ENST00000637156 GCC1Q96CN9 775 aa26.34■■□□□ 1.81
CLN8-213ENST00000637156 ARFGEF2Q9Y6D5 1785 aa26.34■■□□□ 1.81
CLN8-213ENST00000637156 A0A087WZG4 1122 aa26.34■■□□□ 1.81
CLN8-213ENST00000637156 TRIM28Q13263 835 aaKnown RBP26.34■■□□□ 1.81
CLN8-213ENST00000637156 CCDC191Q8NCU4 936 aa26.34■■□□□ 1.81
CLN8-213ENST00000637156 SUCLG2Q96I99 432 aa26.33■■□□□ 1.81
CLN8-213ENST00000637156 CWC25Q9NXE8 425 aaPredicted RBP26.32■■□□□ 1.8
CLN8-213ENST00000637156 H7C1W4 665 aa26.32■■□□□ 1.8
CLN8-213ENST00000637156 CASP7P55210 303 aa26.32■■□□□ 1.8
CLN8-213ENST00000637156 PPP1R42Q7Z4L9 355 aa26.32■■□□□ 1.8
CLN8-213ENST00000637156 HDAC5Q9UQL6 1122 aa26.32■■□□□ 1.8
CLN8-213ENST00000637156 COL5A3P25940 1745 aaPredicted RBP26.31■■□□□ 1.8
CLN8-213ENST00000637156 NUP188Q5SRE5 1749 aa26.31■■□□□ 1.8
CLN8-213ENST00000637156 HMMRO75330 724 aa26.31■■□□□ 1.8
CLN8-213ENST00000637156 SMIM5Q71RC9 77 aa26.31■■□□□ 1.8
CLN8-213ENST00000637156 PROM2Q8N271 834 aa26.31■■□□□ 1.8
CLN8-213ENST00000637156 RREB1Q92766 1687 aa26.31■■□□□ 1.8
CLN8-213ENST00000637156 UBE3BQ7Z3V4 1068 aa26.3■■□□□ 1.8
CLN8-213ENST00000637156 LY75O60449 1722 aa26.3■■□□□ 1.8
CLN8-213ENST00000637156 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
CLN8-213ENST00000637156 CAMTA2O94983 1202 aa26.3■■□□□ 1.8
CLN8-213ENST00000637156 SSH3Q8TE77 659 aa26.3■■□□□ 1.8
CLN8-213ENST00000637156 NUCB1Q02818 461 aa26.29■■□□□ 1.8
CLN8-213ENST00000637156 MTX1Q13505 466 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 HSP90AB3PQ58FF7 597 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 EPHA10Q5JZY3 1008 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 AMIGO3Q86WK7 504 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 COL15A1P39059 1388 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 SRGAP3O43295 1099 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 POLA2Q14181 598 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 SLC27A3Q5K4L6 730 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 ANKRD45Q5TZF3 282 aa26.28■■□□□ 1.8
CLN8-213ENST00000637156 BICC1Q9H694 974 aaKnown RBP26.28■■□□□ 1.8
CLN8-213ENST00000637156 PLSCR1O15162 318 aa26.27■■□□□ 1.8
CLN8-213ENST00000637156 GNPATO15228 680 aa26.27■■□□□ 1.8
CLN8-213ENST00000637156 RGS3P49796 1198 aa26.27■■□□□ 1.8
CLN8-213ENST00000637156 APBA3O96018 575 aa26.26■■□□□ 1.79
CLN8-213ENST00000637156 GPTP24298 496 aa26.26■■□□□ 1.79
CLN8-213ENST00000637156 RTL5Q5HYW3 569 aaPredicted RBP26.26■■□□□ 1.79
CLN8-213ENST00000637156 ZNF34Q8IZ26 560 aa26.26■■□□□ 1.79
CLN8-213ENST00000637156 TXNRD1Q16881 649 aa26.25■■□□□ 1.79
CLN8-213ENST00000637156 NLRP10Q86W26 655 aa26.25■■□□□ 1.79
CLN8-213ENST00000637156 CHD1LQ86WJ1 897 aa26.25■■□□□ 1.79
CLN8-213ENST00000637156 ILDR1Q86SU0 546 aaPredicted RBP26.24■■□□□ 1.79
CLN8-213ENST00000637156 RTCBQ9Y3I0 505 aaKnown RBP26.24■■□□□ 1.79
CLN8-213ENST00000637156 LNPKQ9C0E8 428 aa26.23■■□□□ 1.79
CLN8-213ENST00000637156 PDE4AP27815 886 aa26.23■■□□□ 1.79
CLN8-213ENST00000637156 EXOC6BQ9Y2D4 811 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms