RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CNKSR1Q969H4 720 aa16.7■□□□□ 0.26
CTSD-208ENST00000636843 C21orf2O43822 256 aa16.7■□□□□ 0.26
CTSD-208ENST00000636843 STYK1Q6J9G0 422 aa16.7■□□□□ 0.26
CTSD-208ENST00000636843 DPY19L2Q6NUT2 758 aa16.7■□□□□ 0.26
CTSD-208ENST00000636843 ZNF652Q9Y2D9 606 aa16.7■□□□□ 0.26
CTSD-208ENST00000636843 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
CTSD-208ENST00000636843 RGL2O15211 777 aa16.69■□□□□ 0.26
CTSD-208ENST00000636843 KLRG1Q96E93 195 aa16.69■□□□□ 0.26
CTSD-208ENST00000636843 LTBP3Q9NS15 1303 aa16.69■□□□□ 0.26
CTSD-208ENST00000636843 ANKRD31Q8N7Z5 1873 aa16.68■□□□□ 0.26
CTSD-208ENST00000636843 SRGNP10124 158 aa16.68■□□□□ 0.26
CTSD-208ENST00000636843 TAF7Q15545 349 aaPredicted RBP16.68■□□□□ 0.26
CTSD-208ENST00000636843 SOGA3Q5TF21 947 aa16.68■□□□□ 0.26
CTSD-208ENST00000636843 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
CTSD-208ENST00000636843 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
CTSD-208ENST00000636843 WDR90Q96KV7 1748 aa16.67■□□□□ 0.26
CTSD-208ENST00000636843 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
CTSD-208ENST00000636843 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
CTSD-208ENST00000636843 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
CTSD-208ENST00000636843 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
CTSD-208ENST00000636843 NEFMP07197 916 aa16.66■□□□□ 0.26
CTSD-208ENST00000636843 HTRA3P83110 453 aa16.66■□□□□ 0.26
CTSD-208ENST00000636843 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
CTSD-208ENST00000636843 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
CTSD-208ENST00000636843 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
CTSD-208ENST00000636843 PRPF40BQ6NWY9 871 aaKnown RBP16.65■□□□□ 0.26
CTSD-208ENST00000636843 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
CTSD-208ENST00000636843 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
CTSD-208ENST00000636843 TPTE2Q6XPS3 522 aa16.65■□□□□ 0.26
CTSD-208ENST00000636843 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
CTSD-208ENST00000636843 BCORQ6W2J9 1755 aa16.64■□□□□ 0.25
CTSD-208ENST00000636843 POTECB2RU33 542 aa16.64■□□□□ 0.25
CTSD-208ENST00000636843 PNISRQ8TF01 805 aaKnown RBP16.64■□□□□ 0.25
CTSD-208ENST00000636843 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.254e-13■□□□□ 10.1
CTSD-208ENST00000636843 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
CTSD-208ENST00000636843 KLRG2A4D1S0 409 aaPredicted RBP16.63■□□□□ 0.25
CTSD-208ENST00000636843 NPR1P16066 1061 aa16.63■□□□□ 0.25
CTSD-208ENST00000636843 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
CTSD-208ENST00000636843 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
CTSD-208ENST00000636843 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
CTSD-208ENST00000636843 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
CTSD-208ENST00000636843 CCDC93Q567U6 631 aa16.61■□□□□ 0.25
CTSD-208ENST00000636843 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
CTSD-208ENST00000636843 SLX4Q8IY92 1834 aa16.61■□□□□ 0.25
CTSD-208ENST00000636843 PLEKHF1Q96S99 279 aa16.6■□□□□ 0.25
CTSD-208ENST00000636843 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
CTSD-208ENST00000636843 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
CTSD-208ENST00000636843 NFE2L2Q16236 605 aa16.6■□□□□ 0.25
CTSD-208ENST00000636843 HLFQ16534 295 aa16.6■□□□□ 0.25
CTSD-208ENST00000636843 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
CTSD-208ENST00000636843 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
CTSD-208ENST00000636843 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.24
CTSD-208ENST00000636843 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
CTSD-208ENST00000636843 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
CTSD-208ENST00000636843 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
CTSD-208ENST00000636843 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
CTSD-208ENST00000636843 ARFGEF2Q9Y6D5 1785 aa16.58■□□□□ 0.24
CTSD-208ENST00000636843 FAM177BA6PVY3 158 aa16.57■□□□□ 0.24
CTSD-208ENST00000636843 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
CTSD-208ENST00000636843 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
CTSD-208ENST00000636843 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
CTSD-208ENST00000636843 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
CTSD-208ENST00000636843 PRKRIP1Q9H875 184 aaPredicted RBP16.56■□□□□ 0.24
CTSD-208ENST00000636843 MAPK8IP3Q9UPT6 1336 aa16.56■□□□□ 0.24
CTSD-208ENST00000636843 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
CTSD-208ENST00000636843 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
CTSD-208ENST00000636843 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
CTSD-208ENST00000636843 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
CTSD-208ENST00000636843 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
CTSD-208ENST00000636843 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
CTSD-208ENST00000636843 THUMPD2Q9BTF0 503 aaKnown RBP16.54■□□□□ 0.24
CTSD-208ENST00000636843 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
CTSD-208ENST00000636843 LAMB4A4D0S4 1761 aa16.53■□□□□ 0.24
CTSD-208ENST00000636843 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
CTSD-208ENST00000636843 CACNA1SQ13698 1873 aa16.53■□□□□ 0.24
CTSD-208ENST00000636843 CC2D2BQ6DHV5 1058 aa16.53■□□□□ 0.24
CTSD-208ENST00000636843 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
CTSD-208ENST00000636843 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
CTSD-208ENST00000636843 MYL6BP14649 208 aa16.52■□□□□ 0.24
CTSD-208ENST00000636843 OLFM4Q6UX06 510 aa16.52■□□□□ 0.24
CTSD-208ENST00000636843 LDHDQ86WU2 507 aa16.52■□□□□ 0.24
CTSD-208ENST00000636843 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
CTSD-208ENST00000636843 SYNE4Q8N205 404 aa16.52■□□□□ 0.24
CTSD-208ENST00000636843 TAF1DQ9H5J8 278 aaPredicted RBP16.52■□□□□ 0.24
CTSD-208ENST00000636843 CREBZFQ9NS37 354 aa16.52■□□□□ 0.24
CTSD-208ENST00000636843 DLG5Q8TDM6 1919 aa16.52■□□□□ 0.23
CTSD-208ENST00000636843 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
CTSD-208ENST00000636843 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
CTSD-208ENST00000636843 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
CTSD-208ENST00000636843 COL13A1Q5TAT6 717 aaPredicted RBP16.51■□□□□ 0.23
CTSD-208ENST00000636843 PSMD1Q99460 953 aa16.51■□□□□ 0.23
CTSD-208ENST00000636843 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
CTSD-208ENST00000636843 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
CTSD-208ENST00000636843 FZD9O00144 591 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
CTSD-208ENST00000636843 RALBP1Q15311 655 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
CTSD-208ENST00000636843 ZNF34Q8IZ26 560 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms