RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 PNMA6EA0A0J9YXQ4 647 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
CACNA1A-216ENST00000635742 KCNQ2O43526 872 aa12.48□□□□□ -0.41
CACNA1A-216ENST00000635742 KCNA4P22459 653 aa12.48□□□□□ -0.41
CACNA1A-216ENST00000635742 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
CACNA1A-216ENST00000635742 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
CACNA1A-216ENST00000635742 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-216ENST00000635742 RREB1Q92766 1687 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 ATP8B2P98198 1209 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 PLBD2Q8NHP8 589 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 TRPC5Q9UL62 973 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 BTAF1O14981 1849 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 COL5A3P25940 1745 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 IBTKQ9P2D0 1353 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 NEURL1BA8MQ27 555 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 HMMRO75330 724 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 CYP19A1P11511 503 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 NEXNQ0ZGT2 675 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 BACH2Q9BYV9 841 aa12.47□□□□□ -0.41
CACNA1A-216ENST00000635742 UTYO14607 1347 aa12.46□□□□□ -0.41
CACNA1A-216ENST00000635742 GRM8O00222 908 aa12.46□□□□□ -0.42
CACNA1A-216ENST00000635742 STARD3NLO95772 234 aa12.46□□□□□ -0.42
CACNA1A-216ENST00000635742 C8orf34Q49A92 452 aa12.46□□□□□ -0.42
CACNA1A-216ENST00000635742 C9orf78Q9NZ63 289 aaPredicted RBP12.46□□□□□ -0.42
CACNA1A-216ENST00000635742 ZBTB1Q9Y2K1 713 aa12.46□□□□□ -0.42
CACNA1A-216ENST00000635742 SBF2Q86WG5 1849 aa12.46□□□□□ -0.42
CACNA1A-216ENST00000635742 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 FAM182BQ5T319 152 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 PTF1AQ7RTS3 328 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 ZBTB3Q9H5J0 574 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 ZNF330Q9Y3S2 320 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 ATP5J2-PTCD1G3V325 749 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 GCKRQ14397 625 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 FAM161AQ3B820 660 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 PPP1R42Q7Z4L9 355 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 SUCLG2Q96I99 432 aa12.45□□□□□ -0.42
CACNA1A-216ENST00000635742 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 APBB1O00213 710 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 SMARCA5O60264 1052 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 SIK1P57059 783 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 ITPK1Q13572 414 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 POLA2Q14181 598 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 SSH3Q8TE77 659 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 KAZALD1Q96I82 304 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 EXOC6BQ9Y2D4 811 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 ANKRD36CQ5JPF3 1778 aa12.44□□□□□ -0.42
CACNA1A-216ENST00000635742 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-216ENST00000635742 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-216ENST00000635742 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
CACNA1A-216ENST00000635742 QTRT2Q9H974 415 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-216ENST00000635742 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
CACNA1A-216ENST00000635742 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
CACNA1A-216ENST00000635742 SMARCC1Q92922 1105 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-216ENST00000635742 MTX1Q13505 466 aa12.42□□□□□ -0.42
CACNA1A-216ENST00000635742 JARID2Q92833 1246 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-216ENST00000635742 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-216ENST00000635742 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 NUP98P52948 1817 aa12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 CASP7P55210 303 aa12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 INTS5Q6P9B9 1019 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 UBE3BQ7Z3V4 1068 aa12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 C16orf71Q8IYS4 520 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 CCDC87Q9NVE4 849 aa12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 LY75O60449 1722 aa12.41□□□□□ -0.42
CACNA1A-216ENST00000635742 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
CACNA1A-216ENST00000635742 A0A087WZG4 1122 aa12.4□□□□□ -0.42
CACNA1A-216ENST00000635742 IL6STP40189 918 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-216ENST00000635742 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-216ENST00000635742 ISCA1Q9BUE6 129 aa12.4□□□□□ -0.42
CACNA1A-216ENST00000635742 COL15A1P39059 1388 aa12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 BCORQ6W2J9 1755 aa12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 SURF6O75683 361 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 HLFQ16534 295 aa12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
CACNA1A-216ENST00000635742 H7C1W4 665 aa12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 EIF5P55010 431 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 KCNQ4P56696 695 aa12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 CCDC191Q8NCU4 936 aa12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 LINC00116Q8NCU8 138 aa12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 TAF1LQ8IZX4 1826 aa12.38□□□□□ -0.43
CACNA1A-216ENST00000635742 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
CACNA1A-216ENST00000635742 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-216ENST00000635742 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-216ENST00000635742 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
CACNA1A-216ENST00000635742 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-216ENST00000635742 SALL3Q9BXA9 1300 aa12.36□□□□□ -0.43
CACNA1A-216ENST00000635742 RAB11FIP3O75154 756 aa12.36□□□□□ -0.43
CACNA1A-216ENST00000635742 SEC24BO95487 1268 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms