RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 SCN11AQ9UI33 1791 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 GNAT3A8MTJ3 354 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 ERVV-2B6SEH9 535 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 RNMTO43148 476 aaKnown RBP7.36□□□□□ -1.23
LINC00550-202ENST00000629570 EVI5O60447 810 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 PTPREP23469 700 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 CCDC146Q8IYE0 955 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 IL17REQ8NFR9 667 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 LARP6Q9BRS8 491 aaKnown RBP7.36□□□□□ -1.23
LINC00550-202ENST00000629570 MRS2Q9HD23 443 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 LRRC4BQ9NT99 713 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 ASAP1Q9ULH1 1129 aa7.36□□□□□ -1.23
LINC00550-202ENST00000629570 LY75O60449 1722 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 CEMIPQ8WUJ3 1361 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 PAPPAQ13219 1627 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 MAPK8IP3Q9UPT6 1336 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 PTPN5P54829 565 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 CABP4P57796 275 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 DCTN1Q14203 1278 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 MCM10Q7L590 875 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 DDX27Q96GQ7 796 aaKnown RBP7.35□□□□□ -1.23
LINC00550-202ENST00000629570 ZBED2Q9BTP6 218 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 ADAM33Q9BZ11 813 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 SLC52A2Q9HAB3 445 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 SRCAPQ6ZRS2 3230 aa7.35□□□□□ -1.23
LINC00550-202ENST00000629570 BHMG1C9JSJ3 638 aaPredicted RBP7.34□□□□□ -1.23
LINC00550-202ENST00000629570 NEFMP07197 916 aa7.34□□□□□ -1.23
LINC00550-202ENST00000629570 NFE2L2Q16236 605 aa7.34□□□□□ -1.23
LINC00550-202ENST00000629570 PNISRQ8TF01 805 aaKnown RBP7.34□□□□□ -1.23
LINC00550-202ENST00000629570 THUMPD2Q9BTF0 503 aaKnown RBP7.34□□□□□ -1.23
LINC00550-202ENST00000629570 CCNL1Q9UK58 526 aaPredicted RBP7.34□□□□□ -1.23
LINC00550-202ENST00000629570 RRP7AQ9Y3A4 280 aaKnown RBP7.34□□□□□ -1.23
LINC00550-202ENST00000629570 VIRMAQ69YN4 1812 aaKnown RBP7.34□□□□□ -1.24
LINC00550-202ENST00000629570 LOC102724428A0A0B4J2F2 783 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 TMPOP42166 694 aaKnown RBP7.33□□□□□ -1.24
LINC00550-202ENST00000629570 SIK1P57059 783 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 TEFQ10587 303 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 SLC39A6Q13433 755 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 MFSD10Q14728 455 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 R3HDM1Q15032 1099 aaKnown RBP7.33□□□□□ -1.24
LINC00550-202ENST00000629570 ZNF827Q17R98 1081 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 SLC27A3Q5K4L6 730 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 DIEXFQ68CQ4 756 aaKnown RBP7.33□□□□□ -1.24
LINC00550-202ENST00000629570 RTF1Q92541 710 aaKnown RBP7.33□□□□□ -1.24
LINC00550-202ENST00000629570 SMARCC1Q92922 1105 aaPredicted RBP7.33□□□□□ -1.24
LINC00550-202ENST00000629570 ZDHHC16Q969W1 377 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 RUNDC1Q96C34 613 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 SLC4A9Q96Q91 983 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 PNNQ9H307 717 aaKnown RBP7.33□□□□□ -1.24
LINC00550-202ENST00000629570 SIPA1L3O60292 1781 aaPredicted RBP7.33□□□□□ -1.24
LINC00550-202ENST00000629570 DLG5Q8TDM6 1919 aa7.33□□□□□ -1.24
LINC00550-202ENST00000629570 KCPQ6ZWJ8 1503 aa7.32□□□□□ -1.24
LINC00550-202ENST00000629570 SENP3-EIF4A1A0A087X0R7 540 aa7.32□□□□□ -1.24
LINC00550-202ENST00000629570 PTCD1O75127 700 aaKnown RBP7.32□□□□□ -1.24
LINC00550-202ENST00000629570 MAP3K9P80192 1104 aa7.32□□□□□ -1.24
LINC00550-202ENST00000629570 ITPK1Q13572 414 aa7.32□□□□□ -1.24
LINC00550-202ENST00000629570 NEUROD2Q15784 382 aa7.32□□□□□ -1.24
LINC00550-202ENST00000629570 THSD4Q6ZMP0 1018 aa7.32□□□□□ -1.24
LINC00550-202ENST00000629570 C5P01031 1676 aa7.32□□□□□ -1.24
LINC00550-202ENST00000629570 APAF1O14727 1248 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 KCNQ3O43525 872 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 HTATSF1O43719 755 aaKnown RBP7.31□□□□□ -1.24
LINC00550-202ENST00000629570 ATP6V1AP38606 617 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 RIPK4P57078 832 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 SLC15A2Q16348 729 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 NBPF14Q5TI25 921 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 AMIGO3Q86WK7 504 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 MRPL50Q8N5N7 158 aaKnown RBP7.31□□□□□ -1.24
LINC00550-202ENST00000629570 LINC00116Q8NCU8 138 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 PDGFDQ9GZP0 370 aaPredicted RBP7.31□□□□□ -1.24
LINC00550-202ENST00000629570 EMILIN3Q9NT22 766 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 STK32BQ9NY57 414 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 UBR2Q8IWV8 1755 aa7.31□□□□□ -1.24
LINC00550-202ENST00000629570 C4BP0C0L5 1744 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 TJP1Q07157 1748 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 TAF1LQ8IZX4 1826 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 GOLGA8CPA6NN73 597 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 BTBD11A6QL63 1104 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 ZNF790Q6PG37 636 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 SMIM5Q71RC9 77 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 FAM9BQ8IZU0 186 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 WNT2BQ93097 391 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 MIS18AQ9NYP9 233 aa7.3□□□□□ -1.24
LINC00550-202ENST00000629570 PNPLA7Q6ZV29 1317 aa7.29□□□□□ -1.24
LINC00550-202ENST00000629570 TUBGCP6Q96RT7 1819 aa7.29□□□□□ -1.24
LINC00550-202ENST00000629570 ZNF831Q5JPB2 1677 aa7.29□□□□□ -1.24
LINC00550-202ENST00000629570 CASZ1Q86V15 1759 aa7.29□□□□□ -1.24
LINC00550-202ENST00000629570 LMOD3Q0VAK6 560 aa7.29□□□□□ -1.24
LINC00550-202ENST00000629570 TTC5Q8N0Z6 440 aa7.29□□□□□ -1.24
LINC00550-202ENST00000629570 ZNF496Q96IT1 587 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-202ENST00000629570 TFCP2L1Q9NZI6 479 aa7.29□□□□□ -1.24
LINC00550-202ENST00000629570 CICQ96RK0 1608 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-202ENST00000629570 COL5A3P25940 1745 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-202ENST00000629570 CCER2I3L3R5 266 aa7.28□□□□□ -1.24
LINC00550-202ENST00000629570 GNPATO15228 680 aa7.28□□□□□ -1.24
LINC00550-202ENST00000629570 CRKLP46109 303 aaKnown RBP7.28□□□□□ -1.24
LINC00550-202ENST00000629570 TAF7Q15545 349 aaPredicted RBP7.28□□□□□ -1.24
LINC00550-202ENST00000629570 DNAJC10Q8IXB1 793 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms