RNA–Protein interactions for RNA: ENST00000629504.1

GABARAPL1-219, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 4 BASIC

Gene GABARAPL1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-219ENST00000629504 PNMA8AQ86V59 439 aaPredicted RBP16.4■□□□□ 0.22
GABARAPL1-219ENST00000629504 TAF1DQ9H5J8 278 aaPredicted RBP16.4■□□□□ 0.22
GABARAPL1-219ENST00000629504 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
GABARAPL1-219ENST00000629504 FOXN1O15353 648 aa16.39■□□□□ 0.21
GABARAPL1-219ENST00000629504 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
GABARAPL1-219ENST00000629504 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
GABARAPL1-219ENST00000629504 NPR1P16066 1061 aa16.38■□□□□ 0.21
GABARAPL1-219ENST00000629504 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
GABARAPL1-219ENST00000629504 DZIP3Q86Y13 1208 aaKnown RBP16.38■□□□□ 0.21
GABARAPL1-219ENST00000629504 RTKN2Q8IZC4 609 aa16.38■□□□□ 0.21
GABARAPL1-219ENST00000629504 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
GABARAPL1-219ENST00000629504 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
GABARAPL1-219ENST00000629504 KLRG2A4D1S0 409 aaPredicted RBP16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 TPTE2Q6XPS3 522 aa16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 HACL1Q9UJ83 578 aa16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 SCN4AP35499 1836 aa16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 ANKRD31Q8N7Z5 1873 aa16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
GABARAPL1-219ENST00000629504 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
GABARAPL1-219ENST00000629504 VEGFBP49765 207 aa16.36■□□□□ 0.21
GABARAPL1-219ENST00000629504 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
GABARAPL1-219ENST00000629504 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
GABARAPL1-219ENST00000629504 WBP1LQ9NX94 342 aa16.36■□□□□ 0.21
GABARAPL1-219ENST00000629504 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
GABARAPL1-219ENST00000629504 A1BGP04217 495 aa16.35■□□□□ 0.21
GABARAPL1-219ENST00000629504 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
GABARAPL1-219ENST00000629504 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
GABARAPL1-219ENST00000629504 EPHX2P34913 555 aa16.34■□□□□ 0.21
GABARAPL1-219ENST00000629504 DEFB115Q30KQ5 88 aa16.34■□□□□ 0.21
GABARAPL1-219ENST00000629504 CEMIPQ8WUJ3 1361 aa16.34■□□□□ 0.21
GABARAPL1-219ENST00000629504 VIRMAQ69YN4 1812 aaKnown RBP16.33■□□□□ 0.21
GABARAPL1-219ENST00000629504 PER1O15534 1290 aaPredicted RBP16.33■□□□□ 0.2
GABARAPL1-219ENST00000629504 GRIPAP1Q4V328 841 aa16.33■□□□□ 0.2
GABARAPL1-219ENST00000629504 EAPPQ56P03 285 aaPredicted RBP16.33■□□□□ 0.2
GABARAPL1-219ENST00000629504 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
GABARAPL1-219ENST00000629504 GPC2Q8N158 579 aa16.33■□□□□ 0.2
GABARAPL1-219ENST00000629504 FZD9O00144 591 aa16.32■□□□□ 0.2
GABARAPL1-219ENST00000629504 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
GABARAPL1-219ENST00000629504 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
GABARAPL1-219ENST00000629504 COL11A2P13942 1736 aaPredicted RBP16.32■□□□□ 0.2
GABARAPL1-219ENST00000629504 SLX4Q8IY92 1834 aa16.32■□□□□ 0.2
GABARAPL1-219ENST00000629504 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
GABARAPL1-219ENST00000629504 JDP2Q8WYK2 163 aa16.32■□□□□ 0.2
GABARAPL1-219ENST00000629504 ARFGEF2Q9Y6D5 1785 aa16.31■□□□□ 0.2
GABARAPL1-219ENST00000629504 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
GABARAPL1-219ENST00000629504 LBX1P52954 281 aa16.31■□□□□ 0.2
GABARAPL1-219ENST00000629504 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
GABARAPL1-219ENST00000629504 PSMD1Q99460 953 aa16.3■□□□□ 0.2
GABARAPL1-219ENST00000629504 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
GABARAPL1-219ENST00000629504 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
GABARAPL1-219ENST00000629504 WDR33Q9C0J8 1336 aaKnown RBP16.29■□□□□ 0.2
GABARAPL1-219ENST00000629504 GTF2E1P29083 439 aaPredicted RBP16.29■□□□□ 0.2
GABARAPL1-219ENST00000629504 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
GABARAPL1-219ENST00000629504 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
GABARAPL1-219ENST00000629504 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 ECE1P42892 770 aa16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 BEGAINQ9BUH8 593 aa16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
GABARAPL1-219ENST00000629504 LMOD1P29536 600 aaPredicted RBP16.27■□□□□ 0.2
GABARAPL1-219ENST00000629504 ABHD8Q96I13 439 aa16.27■□□□□ 0.2
GABARAPL1-219ENST00000629504 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
GABARAPL1-219ENST00000629504 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
GABARAPL1-219ENST00000629504 NUDCQ9Y266 331 aa16.27■□□□□ 0.2
GABARAPL1-219ENST00000629504 SIPA1L3O60292 1781 aaPredicted RBP16.27■□□□□ 0.2
GABARAPL1-219ENST00000629504 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
GABARAPL1-219ENST00000629504 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
GABARAPL1-219ENST00000629504 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
GABARAPL1-219ENST00000629504 HSPA8P11142 646 aaKnown RBP16.26■□□□□ 0.19
GABARAPL1-219ENST00000629504 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
GABARAPL1-219ENST00000629504 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
GABARAPL1-219ENST00000629504 COL3A1P02461 1466 aaPredicted RBP16.25■□□□□ 0.19
GABARAPL1-219ENST00000629504 KCNQ3O43525 872 aa16.25■□□□□ 0.19
GABARAPL1-219ENST00000629504 SLC34A2O95436 690 aa16.25■□□□□ 0.19
GABARAPL1-219ENST00000629504 CRY2Q49AN0 593 aa16.25■□□□□ 0.19
GABARAPL1-219ENST00000629504 ADAMTSL1Q8N6G6 1762 aa16.25■□□□□ 0.19
GABARAPL1-219ENST00000629504 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
GABARAPL1-219ENST00000629504 USP50Q70EL3 339 aaPredicted RBP16.24■□□□□ 0.19
GABARAPL1-219ENST00000629504 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
GABARAPL1-219ENST00000629504 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
GABARAPL1-219ENST00000629504 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
GABARAPL1-219ENST00000629504 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
GABARAPL1-219ENST00000629504 NBPF26B4DH59 902 aa16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 CA12O43570 354 aa16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 HOXA10P31260 410 aaPredicted RBP16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 MAP2K2P36507 400 aa16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 NBPF10Q6P3W6 841 aaKnown RBP16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 NBPF15Q8N660 670 aa16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 CACNA1SQ13698 1873 aa16.22■□□□□ 0.19
GABARAPL1-219ENST00000629504 PIP4K2AP48426 406 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms