RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 METTL22Q9BUU2 404 aaPredicted RBP16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 LINS1Q8NG48 757 aa16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 BTAF1O14981 1849 aa16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 GNAI3P08754 354 aa16.93■□□□□ 0.3
PDXDC1-218ENST00000627450 CRKLP46109 303 aaKnown RBP16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 SBF2Q86WG5 1849 aa16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 MYH14Q7Z406 1995 aaKnown RBP16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 NEURL1BA8MQ27 555 aa16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 SMIM5Q71RC9 77 aa16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 ANKRD44Q8N8A2 993 aa16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 SMARCC1Q92922 1105 aaPredicted RBP16.92■□□□□ 0.3
PDXDC1-218ENST00000627450 PNMA6EA0A0J9YXQ4 647 aa16.91■□□□□ 0.3
PDXDC1-218ENST00000627450 NEXNQ0ZGT2 675 aa16.91■□□□□ 0.3
PDXDC1-218ENST00000627450 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
PDXDC1-218ENST00000627450 ARFGEF2Q9Y6D5 1785 aa16.91■□□□□ 0.3
PDXDC1-218ENST00000627450 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 POTEAQ6S8J7 498 aa16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 TBC1D2BQ9UPU7 963 aa16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 ALDH1L1O75891 902 aa16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 TRIM37O94972 964 aa16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 SMC5Q8IY18 1101 aa16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 LINC00116Q8NCU8 138 aa16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 NHSQ6T4R5 1651 aa16.9■□□□□ 0.3
PDXDC1-218ENST00000627450 APBB1O00213 710 aa16.89■□□□□ 0.29
PDXDC1-218ENST00000627450 RXRBP28702 533 aa16.89■□□□□ 0.29
PDXDC1-218ENST00000627450 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.29
PDXDC1-218ENST00000627450 GRM8O00222 908 aa16.89■□□□□ 0.29
PDXDC1-218ENST00000627450 GCKRQ14397 625 aa16.89■□□□□ 0.29
PDXDC1-218ENST00000627450 HLFQ16534 295 aa16.89■□□□□ 0.29
PDXDC1-218ENST00000627450 CCDC87Q9NVE4 849 aa16.89■□□□□ 0.29
PDXDC1-218ENST00000627450 KIF6Q6ZMV9 814 aa16.87■□□□□ 0.29
PDXDC1-218ENST00000627450 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
PDXDC1-218ENST00000627450 KAZALD1Q96I82 304 aa16.87■□□□□ 0.29
PDXDC1-218ENST00000627450 LNPKQ9C0E8 428 aa16.87■□□□□ 0.29
PDXDC1-218ENST00000627450 NUP188Q5SRE5 1749 aa16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 SUCLG2Q96I99 432 aa16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 CCNL1Q9UK58 526 aaPredicted RBP16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 AFDNP55196 1824 aaKnown RBP16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 UBE3BQ7Z3V4 1068 aa16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 DZIP3Q86Y13 1208 aaKnown RBP16.86■□□□□ 0.29
PDXDC1-218ENST00000627450 A0A087WZG4 1122 aa16.85■□□□□ 0.29
PDXDC1-218ENST00000627450 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
PDXDC1-218ENST00000627450 MAP3K15Q6ZN16 1313 aa16.85■□□□□ 0.29
PDXDC1-218ENST00000627450 GPTP24298 496 aa16.85■□□□□ 0.29
PDXDC1-218ENST00000627450 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
PDXDC1-218ENST00000627450 DCTPP1Q9H773 170 aa16.85■□□□□ 0.29
PDXDC1-218ENST00000627450 EXOC6BQ9Y2D4 811 aa16.85■□□□□ 0.29
PDXDC1-218ENST00000627450 PDE4AP27815 886 aa16.84■□□□□ 0.29
PDXDC1-218ENST00000627450 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
PDXDC1-218ENST00000627450 SRGAP3O43295 1099 aa16.84■□□□□ 0.29
PDXDC1-218ENST00000627450 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
PDXDC1-218ENST00000627450 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
PDXDC1-218ENST00000627450 NUCB1Q02818 461 aa16.83■□□□□ 0.29
PDXDC1-218ENST00000627450 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.29
PDXDC1-218ENST00000627450 GCC1Q96CN9 775 aa16.83■□□□□ 0.29
PDXDC1-218ENST00000627450 SMARCA5O60264 1052 aaPredicted RBP16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 TCIRG1Q13488 830 aa16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 UTYO14607 1347 aa16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 GIGYF2Q6Y7W6 1299 aaKnown RBP16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 CHD1LQ86WJ1 897 aa16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
PDXDC1-218ENST00000627450 HMMRO75330 724 aa16.82■□□□□ 0.28
PDXDC1-218ENST00000627450 SYNE4Q8N205 404 aa16.82■□□□□ 0.28
PDXDC1-218ENST00000627450 ISCA1Q9BUE6 129 aa16.81■□□□□ 0.28
PDXDC1-218ENST00000627450 C16orf71Q8IYS4 520 aaPredicted RBP16.81■□□□□ 0.28
PDXDC1-218ENST00000627450 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
PDXDC1-218ENST00000627450 CASP7P55210 303 aa16.8■□□□□ 0.28
PDXDC1-218ENST00000627450 CCDC191Q8NCU4 936 aa16.8■□□□□ 0.28
PDXDC1-218ENST00000627450 PA2G4Q9UQ80 394 aaKnown RBP16.8■□□□□ 0.28
PDXDC1-218ENST00000627450 COL15A1P39059 1388 aa16.8■□□□□ 0.28
PDXDC1-218ENST00000627450 GNPATO15228 680 aa16.8■□□□□ 0.28
PDXDC1-218ENST00000627450 FAM89AQ96GI7 184 aa16.8■□□□□ 0.28
PDXDC1-218ENST00000627450 NUP98P52948 1817 aa16.8■□□□□ 0.28
PDXDC1-218ENST00000627450 LY75O60449 1722 aa16.79■□□□□ 0.28
PDXDC1-218ENST00000627450 KLHDC4Q8TBB5 520 aa16.79■□□□□ 0.28
PDXDC1-218ENST00000627450 CICQ96RK0 1608 aaPredicted RBP16.79■□□□□ 0.28
PDXDC1-218ENST00000627450 FAM177BA6PVY3 158 aa16.79■□□□□ 0.28
PDXDC1-218ENST00000627450 CAMTA2O94983 1202 aa16.79■□□□□ 0.28
PDXDC1-218ENST00000627450 H7C1W4 665 aa16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 SURF6O75683 361 aaKnown RBP16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 POLA2Q14181 598 aa16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 OTUD7AQ8TE49 926 aaPredicted RBP16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 NLRP10Q86W26 655 aa16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 UBN2Q6ZU65 1347 aa16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 RREB1Q92766 1687 aa16.78■□□□□ 0.28
PDXDC1-218ENST00000627450 PHF14O94880 888 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms