RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 ANKRD44Q8N8A2 993 aa16.18■□□□□ 0.18
SPTAN1-211ENST00000625980 BTAF1O14981 1849 aa16.17■□□□□ 0.18
SPTAN1-211ENST00000625980 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
SPTAN1-211ENST00000625980 ZBTB3Q9H5J0 574 aa16.17■□□□□ 0.18
SPTAN1-211ENST00000625980 LRRFIP2Q9Y608 721 aaKnown RBP16.17■□□□□ 0.18
SPTAN1-211ENST00000625980 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 RXRBP28702 533 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 CRKLP46109 303 aaKnown RBP16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 SBF2Q86WG5 1849 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 CCDC87Q9NVE4 849 aa16.16■□□□□ 0.18
SPTAN1-211ENST00000625980 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
SPTAN1-211ENST00000625980 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
SPTAN1-211ENST00000625980 BCL11BQ9C0K0 894 aaPredicted RBP16.15■□□□□ 0.18
SPTAN1-211ENST00000625980 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
SPTAN1-211ENST00000625980 SMC5Q8IY18 1101 aa16.14■□□□□ 0.17
SPTAN1-211ENST00000625980 ARXQ96QS3 562 aa16.14■□□□□ 0.17
SPTAN1-211ENST00000625980 C9orf78Q9NZ63 289 aaPredicted RBP16.14■□□□□ 0.17
SPTAN1-211ENST00000625980 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.17
SPTAN1-211ENST00000625980 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
SPTAN1-211ENST00000625980 GCKRQ14397 625 aa16.14■□□□□ 0.17
SPTAN1-211ENST00000625980 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
SPTAN1-211ENST00000625980 GRM8O00222 908 aa16.13■□□□□ 0.17
SPTAN1-211ENST00000625980 TRIM37O94972 964 aa16.13■□□□□ 0.17
SPTAN1-211ENST00000625980 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
SPTAN1-211ENST00000625980 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
SPTAN1-211ENST00000625980 UTYO14607 1347 aa16.12■□□□□ 0.17
SPTAN1-211ENST00000625980 MAP3K15Q6ZN16 1313 aa16.12■□□□□ 0.17
SPTAN1-211ENST00000625980 PNMA6EA0A0J9YXQ4 647 aa16.12■□□□□ 0.17
SPTAN1-211ENST00000625980 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
SPTAN1-211ENST00000625980 JARID2Q92833 1246 aaPredicted RBP16.12■□□□□ 0.17
SPTAN1-211ENST00000625980 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 HLFQ16534 295 aa16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 SUCLG2Q96I99 432 aa16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 CCNL1Q9UK58 526 aaPredicted RBP16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 RREB1Q92766 1687 aa16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 RGS3P49796 1198 aa16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 DCTPP1Q9H773 170 aa16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
SPTAN1-211ENST00000625980 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
SPTAN1-211ENST00000625980 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
SPTAN1-211ENST00000625980 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
SPTAN1-211ENST00000625980 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
SPTAN1-211ENST00000625980 GIGYF2Q6Y7W6 1299 aaKnown RBP16.09■□□□□ 0.17
SPTAN1-211ENST00000625980 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
SPTAN1-211ENST00000625980 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
SPTAN1-211ENST00000625980 EP400Q96L91 3159 aa16.09■□□□□ 0.17
SPTAN1-211ENST00000625980 A0A087WZG4 1122 aa16.08■□□□□ 0.17
SPTAN1-211ENST00000625980 HMMRO75330 724 aa16.08■□□□□ 0.17
SPTAN1-211ENST00000625980 NUCB1Q02818 461 aa16.08■□□□□ 0.17
SPTAN1-211ENST00000625980 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.17
SPTAN1-211ENST00000625980 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.17
SPTAN1-211ENST00000625980 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 LY75O60449 1722 aa16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 PDE4AP27815 886 aa16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 CASP7P55210 303 aa16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 ANKRD45Q5TZF3 282 aa16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 UBE3BQ7Z3V4 1068 aa16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 LRRC4BQ9NT99 713 aa16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 CWC25Q9NXE8 425 aaPredicted RBP16.08■□□□□ 0.16
SPTAN1-211ENST00000625980 AFDNP55196 1824 aaKnown RBP16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 ERVV-1B6SEH8 477 aa16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 H7C1W4 665 aa16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 EPHA10Q5JZY3 1008 aa16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 CCDC191Q8NCU4 936 aa16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 BICC1Q9H694 974 aaKnown RBP16.07■□□□□ 0.16
SPTAN1-211ENST00000625980 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
SPTAN1-211ENST00000625980 GPTP24298 496 aa16.06■□□□□ 0.16
SPTAN1-211ENST00000625980 POLA2Q14181 598 aa16.06■□□□□ 0.16
SPTAN1-211ENST00000625980 RTL5Q5HYW3 569 aaPredicted RBP16.06■□□□□ 0.16
SPTAN1-211ENST00000625980 CHD1LQ86WJ1 897 aa16.06■□□□□ 0.16
SPTAN1-211ENST00000625980 LNPKQ9C0E8 428 aa16.06■□□□□ 0.16
SPTAN1-211ENST00000625980 COL15A1P39059 1388 aa16.06■□□□□ 0.16
SPTAN1-211ENST00000625980 SRGAP3O43295 1099 aa16.05■□□□□ 0.16
SPTAN1-211ENST00000625980 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
SPTAN1-211ENST00000625980 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
SPTAN1-211ENST00000625980 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
SPTAN1-211ENST00000625980 APBB1O00213 710 aa16.05■□□□□ 0.16
SPTAN1-211ENST00000625980 MTX1Q13505 466 aa16.05■□□□□ 0.16
SPTAN1-211ENST00000625980 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
SPTAN1-211ENST00000625980 GNPATO15228 680 aa16.04■□□□□ 0.16
SPTAN1-211ENST00000625980 RPS6KA4O75676 772 aa16.04■□□□□ 0.16
SPTAN1-211ENST00000625980 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
SPTAN1-211ENST00000625980 NLRP10Q86W26 655 aa16.04■□□□□ 0.16
SPTAN1-211ENST00000625980 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
SPTAN1-211ENST00000625980 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
SPTAN1-211ENST00000625980 PROM2Q8N271 834 aa16.02■□□□□ 0.16
SPTAN1-211ENST00000625980 BCL11AQ9H165 835 aa16.02■□□□□ 0.16
SPTAN1-211ENST00000625980 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.15
SPTAN1-211ENST00000625980 UBN2Q6ZU65 1347 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms