RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
LINC01561-202ENST00000623529 CACNA1FO60840 1977 aa12.73□□□□□ -0.37
LINC01561-202ENST00000623529 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
LINC01561-202ENST00000623529 NBR1Q14596 966 aa12.73□□□□□ -0.37
LINC01561-202ENST00000623529 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
LINC01561-202ENST00000623529 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
LINC01561-202ENST00000623529 ADCY9O60503 1353 aa12.73□□□□□ -0.37
LINC01561-202ENST00000623529 TRIM37O94972 964 aa12.72□□□□□ -0.37
LINC01561-202ENST00000623529 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
LINC01561-202ENST00000623529 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
LINC01561-202ENST00000623529 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
LINC01561-202ENST00000623529 CCDC136Q96JN2 1154 aa12.71□□□□□ -0.37
LINC01561-202ENST00000623529 DDX19BQ9UMR2 479 aa12.71□□□□□ -0.37
LINC01561-202ENST00000623529 STARD3NLO95772 234 aa12.71□□□□□ -0.37
LINC01561-202ENST00000623529 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.37
LINC01561-202ENST00000623529 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
LINC01561-202ENST00000623529 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
LINC01561-202ENST00000623529 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
LINC01561-202ENST00000623529 MAP3K2Q9Y2U5 619 aa12.71□□□□□ -0.37
LINC01561-202ENST00000623529 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
LINC01561-202ENST00000623529 DHX37Q8IY37 1157 aaKnown RBP12.7□□□□□ -0.38
LINC01561-202ENST00000623529 DNAAF4Q8WXU2 420 aa12.7□□□□□ -0.38
LINC01561-202ENST00000623529 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
LINC01561-202ENST00000623529 EN1Q05925 392 aaPredicted RBP12.7□□□□□ -0.38
LINC01561-202ENST00000623529 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
LINC01561-202ENST00000623529 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
LINC01561-202ENST00000623529 ERBB4Q15303 1308 aa12.69□□□□□ -0.38
LINC01561-202ENST00000623529 IGHDP01880 384 aa12.69□□□□□ -0.38
LINC01561-202ENST00000623529 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
LINC01561-202ENST00000623529 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
LINC01561-202ENST00000623529 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
LINC01561-202ENST00000623529 MEIS3Q99687 375 aa12.69□□□□□ -0.38
LINC01561-202ENST00000623529 C1orf115Q9H7X2 142 aa12.69□□□□□ -0.38
LINC01561-202ENST00000623529 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
LINC01561-202ENST00000623529 BTAF1O14981 1849 aa12.68□□□□□ -0.38
LINC01561-202ENST00000623529 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
LINC01561-202ENST00000623529 RIC3Q7Z5B4 369 aa12.68□□□□□ -0.38
LINC01561-202ENST00000623529 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
LINC01561-202ENST00000623529 USP44Q9H0E7 712 aa12.68□□□□□ -0.38
LINC01561-202ENST00000623529 LRRC4BQ9NT99 713 aa12.68□□□□□ -0.38
LINC01561-202ENST00000623529 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
LINC01561-202ENST00000623529 IGKV5-2P06315 115 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 C1QTNF8P60827 252 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 CWF19L2Q2TBE0 894 aaKnown RBP12.67□□□□□ -0.38
LINC01561-202ENST00000623529 PROM2Q8N271 834 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 TJP1Q07157 1748 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 LAMB4A4D0S4 1761 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 AAMPQ13685 434 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 GLIPR1L2Q4G1C9 344 aa12.67□□□□□ -0.38
LINC01561-202ENST00000623529 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
LINC01561-202ENST00000623529 DDX58O95786 925 aaKnown RBP12.66□□□□□ -0.38
LINC01561-202ENST00000623529 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
LINC01561-202ENST00000623529 PLBD2Q8NHP8 589 aa12.66□□□□□ -0.38
LINC01561-202ENST00000623529 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
LINC01561-202ENST00000623529 NBPF7P0C2Y1 421 aaPredicted RBP12.66□□□□□ -0.38
LINC01561-202ENST00000623529 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
LINC01561-202ENST00000623529 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
LINC01561-202ENST00000623529 METTL22Q9BUU2 404 aaPredicted RBP12.66□□□□□ -0.38
LINC01561-202ENST00000623529 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
LINC01561-202ENST00000623529 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
LINC01561-202ENST00000623529 CCNL1Q9UK58 526 aaPredicted RBP12.66□□□□□ -0.38
LINC01561-202ENST00000623529 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
LINC01561-202ENST00000623529 HLFQ16534 295 aa12.65□□□□□ -0.38
LINC01561-202ENST00000623529 TBC1D2BQ9UPU7 963 aa12.65□□□□□ -0.38
LINC01561-202ENST00000623529 CDK11BP21127 795 aaKnown RBP12.64□□□□□ -0.39
LINC01561-202ENST00000623529 IL6STP40189 918 aaPredicted RBP12.64□□□□□ -0.39
LINC01561-202ENST00000623529 MYD88Q99836 296 aa12.64□□□□□ -0.39
LINC01561-202ENST00000623529 LINS1Q8NG48 757 aa12.64□□□□□ -0.39
LINC01561-202ENST00000623529 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
LINC01561-202ENST00000623529 SKAP1Q86WV1 359 aa12.63□□□□□ -0.39
LINC01561-202ENST00000623529 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
LINC01561-202ENST00000623529 DDRGK1Q96HY6 314 aa12.63□□□□□ -0.39
LINC01561-202ENST00000623529 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
LINC01561-202ENST00000623529 NEURL1BA8MQ27 555 aa12.63□□□□□ -0.39
LINC01561-202ENST00000623529 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
LINC01561-202ENST00000623529 APBA3O96018 575 aa12.62□□□□□ -0.39
LINC01561-202ENST00000623529 ALDH1L1O75891 902 aa12.62□□□□□ -0.39
LINC01561-202ENST00000623529 GCKRQ14397 625 aa12.62□□□□□ -0.39
LINC01561-202ENST00000623529 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
LINC01561-202ENST00000623529 DZIP3Q86Y13 1208 aaKnown RBP12.62□□□□□ -0.39
LINC01561-202ENST00000623529 MAP3K15Q6ZN16 1313 aa12.61□□□□□ -0.39
LINC01561-202ENST00000623529 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
LINC01561-202ENST00000623529 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
LINC01561-202ENST00000623529 LRRFIP2Q9Y608 721 aaKnown RBP12.61□□□□□ -0.39
LINC01561-202ENST00000623529 LY75O60449 1722 aa12.61□□□□□ -0.39
LINC01561-202ENST00000623529 PLSCR1O15162 318 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 NEXNQ0ZGT2 675 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 TCIRG1Q13488 830 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 RC3H1Q5TC82 1133 aaKnown RBP12.6□□□□□ -0.39
LINC01561-202ENST00000623529 GIGYF2Q6Y7W6 1299 aaKnown RBP12.6□□□□□ -0.39
LINC01561-202ENST00000623529 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 CHMP4BQ9H444 224 aaKnown RBP12.6□□□□□ -0.39
LINC01561-202ENST00000623529 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 RPS6KA4O75676 772 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 CEP85Q6P2H3 762 aa12.6□□□□□ -0.39
LINC01561-202ENST00000623529 C9orf78Q9NZ63 289 aaPredicted RBP12.6□□□□□ -0.39
LINC01561-202ENST00000623529 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
LINC01561-202ENST00000623529 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms