RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 MAGI2Q86UL8 1455 aa10.6□□□□□ -0.71
RAB28P4-201ENST00000622233 MEN1O00255 615 aa10.59□□□□□ -0.71
RAB28P4-201ENST00000622233 WASLO00401 505 aaPredicted RBP10.59□□□□□ -0.71
RAB28P4-201ENST00000622233 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
RAB28P4-201ENST00000622233 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
RAB28P4-201ENST00000622233 PURBQ96QR8 312 aaKnown RBP10.59□□□□□ -0.71
RAB28P4-201ENST00000622233 KIDINS220Q9ULH0 1771 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 CCNB3Q8WWL7 1395 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 BMP1P13497 986 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 EPHA4P54764 986 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 SWI5Q1ZZU3 235 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 HRH3Q9Y5N1 445 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 ABCA6Q8N139 1617 aa10.58□□□□□ -0.72
RAB28P4-201ENST00000622233 INO80Q9ULG1 1556 aaPredicted RBP10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 DIP2CQ9Y2E4 1556 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 PLEKHH2Q8IVE3 1493 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 AVPP01185 164 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 ATP2B4P23634 1241 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 PDE4CQ08493 712 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 CLN3Q13286 438 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 OCLNQ16625 522 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 ESCO1Q5FWF5 840 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 C6orf118Q5T5N4 469 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 ESYT1Q9BSJ8 1104 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 KIAA1107Q9UPP5 1409 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 TRAPPC8Q9Y2L5 1435 aa10.57□□□□□ -0.72
RAB28P4-201ENST00000622233 BCORL1Q5H9F3 1711 aa10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 M0R2N6 131 aa10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 SSFA2P28290 1259 aa10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 PKDCCQ504Y2 493 aa10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 SLC4A9Q96Q91 983 aa10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 INSM2Q96T92 566 aaPredicted RBP10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 TSPAN10Q9H1Z9 355 aaPredicted RBP10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 ADAMTSL3P82987 1691 aa10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 REREQ9P2R6 1566 aa10.56□□□□□ -0.72
RAB28P4-201ENST00000622233 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
RAB28P4-201ENST00000622233 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
RAB28P4-201ENST00000622233 BACH1O14867 736 aa10.55□□□□□ -0.72
RAB28P4-201ENST00000622233 SMTNP53814 917 aa10.55□□□□□ -0.72
RAB28P4-201ENST00000622233 CENPCQ03188 943 aa10.55□□□□□ -0.72
RAB28P4-201ENST00000622233 TLR1Q15399 786 aa10.55□□□□□ -0.72
RAB28P4-201ENST00000622233 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
RAB28P4-201ENST00000622233 A6NJY4 79 aa10.54□□□□□ -0.72
RAB28P4-201ENST00000622233 C21orf2O43822 256 aa10.54□□□□□ -0.72
RAB28P4-201ENST00000622233 BRD1O95696 1058 aa10.54□□□□□ -0.72
RAB28P4-201ENST00000622233 CAPN12Q6ZSI9 719 aa10.54□□□□□ -0.72
RAB28P4-201ENST00000622233 SCG3Q8WXD2 468 aaKnown RBP10.54□□□□□ -0.72
RAB28P4-201ENST00000622233 FHDC1Q9C0D6 1143 aaPredicted RBP10.54□□□□□ -0.72
RAB28P4-201ENST00000622233 MBD5Q9P267 1494 aa10.54□□□□□ -0.72
RAB28P4-201ENST00000622233 ARHGEF5Q12774 1597 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 ST8SIA5O15466 376 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 DGAT1O75907 488 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 WEE1P30291 646 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 CTSOP43234 321 aaPredicted RBP10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 FOXK2Q01167 660 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 TRIM46Q7Z4K8 759 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 SLC9A9Q8IVB4 645 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 NLRP3Q96P20 1036 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 TSEN34Q9BSV6 310 aaKnown RBP10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 CXXC1Q9P0U4 656 aaPredicted RBP10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 SCHIP1Q9P0W5 487 aaPredicted RBP10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 CFDP1Q9UEE9 299 aaPredicted RBP10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 ATP7AQ04656 1500 aa10.53□□□□□ -0.72
RAB28P4-201ENST00000622233 C9orf84Q5VXU9 1444 aa10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 SPINT1O43278 529 aa10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 BMP2P12643 396 aa10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 MTFR1Q15390 333 aa10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 MKNK1Q9BUB5 465 aa10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 POLMQ9NP87 494 aaPredicted RBP10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 ADGBQ8N7X0 1667 aa10.52□□□□□ -0.73
RAB28P4-201ENST00000622233 MIA2Q96PC5 1412 aa10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 CROCC2H7BZ55 1655 aa10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 ATP10AO60312 1499 aa10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 FOXD4L5Q5VV16 416 aaPredicted RBP10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 AFAP1Q8N556 730 aa10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 IQSEC3Q9UPP2 1182 aaPredicted RBP10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 PLXNC1O60486 1568 aa10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 ATAD2Q6PL18 1390 aa10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 MADDQ8WXG6 1647 aa10.51□□□□□ -0.73
RAB28P4-201ENST00000622233 CCDC141Q6ZP82 1450 aa10.5□□□□□ -0.73
RAB28P4-201ENST00000622233 FER1L4A9Z1Z3 1794 aa10.5□□□□□ -0.73
RAB28P4-201ENST00000622233 SH3PXD2AQ5TCZ1 1133 aa10.5□□□□□ -0.73
RAB28P4-201ENST00000622233 KCTD17Q8N5Z5 321 aa10.5□□□□□ -0.73
RAB28P4-201ENST00000622233 ZNF644Q9H582 1327 aaPredicted RBP10.5□□□□□ -0.73
RAB28P4-201ENST00000622233 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
RAB28P4-201ENST00000622233 AGLP35573 1532 aa10.49□□□□□ -0.73
RAB28P4-201ENST00000622233 MAST1Q9Y2H9 1570 aa10.49□□□□□ -0.73
RAB28P4-201ENST00000622233 AXIN1O15169 862 aa10.49□□□□□ -0.73
RAB28P4-201ENST00000622233 UPP2O95045 317 aa10.49□□□□□ -0.73
RAB28P4-201ENST00000622233 PARP3Q9Y6F1 533 aa10.49□□□□□ -0.73
RAB28P4-201ENST00000622233 TCOF1Q13428 1488 aaKnown RBP10.49□□□□□ -0.73
RAB28P4-201ENST00000622233 RIMS1Q86UR5 1692 aaKnown RBP10.48□□□□□ -0.73
RAB28P4-201ENST00000622233 PPP1R12BO60237 982 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms