RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 FNBP4Q8N3X1 1017 aaPredicted RBP15.33■□□□□ 0.04
SCAMP1-207ENST00000621999 ROBO1Q9Y6N7 1651 aa15.33■□□□□ 0.04
SCAMP1-207ENST00000621999 AACSQ86V21 672 aa15.33■□□□□ 0.04
SCAMP1-207ENST00000621999 NBPF14Q5TI25 921 aa15.33■□□□□ 0.04
SCAMP1-207ENST00000621999 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.04
SCAMP1-207ENST00000621999 ZBTB7BO15156 539 aaPredicted RBP15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 NBPF7P0C2Y1 421 aaPredicted RBP15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 METTL24Q5JXM2 366 aa15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 ZBTB40Q9NUA8 1239 aa15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 AKAP12Q02952 1782 aa15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 ERC2O15083 957 aa15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 FGD1P98174 961 aa15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
SCAMP1-207ENST00000621999 LDHAL6AQ6ZMR3 332 aa15.31■□□□□ 0.04
SCAMP1-207ENST00000621999 DNAJC2Q99543 621 aaKnown RBP15.31■□□□□ 0.04
SCAMP1-207ENST00000621999 ANKRD18BA2A2Z9 1011 aa15.31■□□□□ 0.04
SCAMP1-207ENST00000621999 TPTE2Q6XPS3 522 aa15.31■□□□□ 0.04
SCAMP1-207ENST00000621999 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
SCAMP1-207ENST00000621999 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
SCAMP1-207ENST00000621999 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
SCAMP1-207ENST00000621999 RPGRQ92834 1020 aaKnown RBP15.3■□□□□ 0.04
SCAMP1-207ENST00000621999 PA2G4Q9UQ80 394 aaKnown RBP15.3■□□□□ 0.04
SCAMP1-207ENST00000621999 MAP4K4O95819 1239 aaPredicted RBP15.3■□□□□ 0.04
SCAMP1-207ENST00000621999 PDE4AP27815 886 aa15.3■□□□□ 0.04
SCAMP1-207ENST00000621999 WWC3Q9ULE0 1092 aa15.3■□□□□ 0.04
SCAMP1-207ENST00000621999 KIF1BPQ96EK5 621 aa15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 NLRP3Q96P20 1036 aa15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 MCCP23508 829 aa15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 GCKRQ14397 625 aa15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 CCDC8Q9H0W5 538 aaPredicted RBP15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 MED1Q15648 1581 aaPredicted RBP15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 TCIRG1Q13488 830 aa15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 NAP1L2Q9ULW6 460 aaPredicted RBP15.29■□□□□ 0.04
SCAMP1-207ENST00000621999 VSIG10Q8N0Z9 540 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 BICC1Q9H694 974 aaKnown RBP15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 PHLPP1O60346 1717 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 ERBB4Q15303 1308 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 IL6STP40189 918 aaPredicted RBP15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 ATP8B2P98198 1209 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 NKX1-1Q15270 411 aaPredicted RBP15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 USPL1Q5W0Q7 1092 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 SMIM5Q71RC9 77 aa15.28■□□□□ 0.04
SCAMP1-207ENST00000621999 CCDC158Q5M9N0 1113 aa15.27■□□□□ 0.04
SCAMP1-207ENST00000621999 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
SCAMP1-207ENST00000621999 DDX46Q7L014 1031 aaKnown RBP15.27■□□□□ 0.04
SCAMP1-207ENST00000621999 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.04
SCAMP1-207ENST00000621999 NFAT5O94916 1531 aa15.27■□□□□ 0.04
SCAMP1-207ENST00000621999 NEURL1BA8MQ27 555 aa15.27■□□□□ 0.03
SCAMP1-207ENST00000621999 ST5P78524 1137 aa15.27■□□□□ 0.03
SCAMP1-207ENST00000621999 MSL1Q68DK7 614 aa15.27■□□□□ 0.03
SCAMP1-207ENST00000621999 USP44Q9H0E7 712 aa15.27■□□□□ 0.03
SCAMP1-207ENST00000621999 CEMIPQ8WUJ3 1361 aa15.27■□□□□ 0.03
SCAMP1-207ENST00000621999 SH3TC1Q8TE82 1336 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 TTC39AQ5SRH9 613 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 BECN1Q14457 450 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 CCDC152Q4G0S7 254 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 ANKIB1Q9P2G1 1089 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 KLHDC4Q8TBB5 520 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 FSD1Q9BTV5 496 aa15.26■□□□□ 0.03
SCAMP1-207ENST00000621999 NYXQ9GZU5 481 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 PARP3Q9Y6F1 533 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 IQSEC2Q5JU85 1478 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 ABCC4O15439 1325 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 MAP3K15Q6ZN16 1313 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 TOPAZ1Q8N9V7 1692 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 SUCLG2Q96I99 432 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 SLIT3O75094 1523 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 RAB11FIP3O75154 756 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 CYP19A1P11511 503 aaPredicted RBP15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 WASHC4Q2M389 1173 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 CNBD1Q8NA66 436 aa15.25■□□□□ 0.03
SCAMP1-207ENST00000621999 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 SRP68Q9UHB9 627 aaKnown RBP15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 NBPF26B4DH59 902 aa15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 EN1Q05925 392 aaPredicted RBP15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 TSHZ3Q63HK5 1081 aa15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 NBPF10Q6P3W6 841 aaKnown RBP15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 NBPF15Q8N660 670 aa15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 ANO2Q9NQ90 1003 aa15.24■□□□□ 0.03
SCAMP1-207ENST00000621999 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
SCAMP1-207ENST00000621999 APPP05067 770 aa15.23■□□□□ 0.03
SCAMP1-207ENST00000621999 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
SCAMP1-207ENST00000621999 HELBQ8NG08 1087 aaPredicted RBP15.23■□□□□ 0.03
SCAMP1-207ENST00000621999 CNTROBQ8N137 903 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms