RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 XAGE3Q8WTP9 111 aa9.53□□□□□ -0.88
TVP23A-211ENST00000619408 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
TVP23A-211ENST00000619408 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
TVP23A-211ENST00000619408 PALLDQ8WX93 1383 aa9.52□□□□□ -0.88
TVP23A-211ENST00000619408 DCAF8L1A6NGE4 600 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 HMMRO75330 724 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 ALDH1L1O75891 902 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 GNAI2P04899 355 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 UBTFL1P0CB47 393 aaPredicted RBP9.52□□□□□ -0.89
TVP23A-211ENST00000619408 TJP1Q07157 1748 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 BEND3Q5T5X7 828 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 COPS6Q7L5N1 327 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 DNAJC10Q8IXB1 793 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 HDAC5Q9UQL6 1122 aa9.52□□□□□ -0.89
TVP23A-211ENST00000619408 ARFGEF2Q9Y6D5 1785 aa9.51□□□□□ -0.89
TVP23A-211ENST00000619408 A1BGP04217 495 aa9.51□□□□□ -0.89
TVP23A-211ENST00000619408 PIP4K2AP48426 406 aaPredicted RBP9.51□□□□□ -0.89
TVP23A-211ENST00000619408 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
TVP23A-211ENST00000619408 ANKRD13DQ6ZTN6 518 aa9.51□□□□□ -0.89
TVP23A-211ENST00000619408 RPAP2Q8IXW5 612 aaPredicted RBP9.51□□□□□ -0.89
TVP23A-211ENST00000619408 SEPT12Q8IYM1 358 aa9.51□□□□□ -0.89
TVP23A-211ENST00000619408 LINS1Q8NG48 757 aa9.51□□□□□ -0.89
TVP23A-211ENST00000619408 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
TVP23A-211ENST00000619408 IBTKQ9P2D0 1353 aaPredicted RBP9.5□□□□□ -0.89
TVP23A-211ENST00000619408 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
TVP23A-211ENST00000619408 TAF7LQ5H9L4 462 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 NBPF14Q5TI25 921 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 CEP85Q6P2H3 762 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 NBPF10Q6P3W6 841 aaKnown RBP9.5□□□□□ -0.89
TVP23A-211ENST00000619408 KIF6Q6ZMV9 814 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 LRP10Q7Z4F1 713 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 NPM2Q86SE8 214 aaKnown RBP9.5□□□□□ -0.89
TVP23A-211ENST00000619408 NBPF15Q8N660 670 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 ANKRD44Q8N8A2 993 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 GCC1Q96CN9 775 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
TVP23A-211ENST00000619408 PDCL3Q9H2J4 239 aa9.5□□□□□ -0.89
TVP23A-211ENST00000619408 C9orf78Q9NZ63 289 aaPredicted RBP9.5□□□□□ -0.89
TVP23A-211ENST00000619408 ZNF831Q5JPB2 1677 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 NUP188Q5SRE5 1749 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 LOC102724428A0A0B4J2F2 783 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 KCNQ2O43526 872 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 CYP19A1P11511 503 aaPredicted RBP9.49□□□□□ -0.89
TVP23A-211ENST00000619408 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
TVP23A-211ENST00000619408 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 SIK1P57059 783 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 MTERF4Q7Z6M4 381 aaKnown RBP9.49□□□□□ -0.89
TVP23A-211ENST00000619408 SMC5Q8IY18 1101 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 MYD88Q99836 296 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 USP44Q9H0E7 712 aa9.49□□□□□ -0.89
TVP23A-211ENST00000619408 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
TVP23A-211ENST00000619408 BTAF1O14981 1849 aa9.48□□□□□ -0.89
TVP23A-211ENST00000619408 TPM2P07951 284 aa9.48□□□□□ -0.89
TVP23A-211ENST00000619408 RGS3P49796 1198 aa9.48□□□□□ -0.89
TVP23A-211ENST00000619408 RBM6P78332 1123 aaKnown RBP9.48□□□□□ -0.89
TVP23A-211ENST00000619408 CWF19L2Q2TBE0 894 aaKnown RBP9.48□□□□□ -0.89
TVP23A-211ENST00000619408 RNF39Q9H2S5 420 aa9.48□□□□□ -0.89
TVP23A-211ENST00000619408 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
TVP23A-211ENST00000619408 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
TVP23A-211ENST00000619408 ISY1Q9ULR0 285 aaKnown RBP9.48□□□□□ -0.89
TVP23A-211ENST00000619408 PDZRN3Q9UPQ7 1066 aa9.48□□□□□ -0.89
TVP23A-211ENST00000619408 LRRFIP2Q9Y608 721 aaKnown RBP9.48□□□□□ -0.89
TVP23A-211ENST00000619408 RREB1Q92766 1687 aa9.48□□□□□ -0.89
TVP23A-211ENST00000619408 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
TVP23A-211ENST00000619408 GRM8O00222 908 aa9.47□□□□□ -0.89
TVP23A-211ENST00000619408 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
TVP23A-211ENST00000619408 SLC4A9Q96Q91 983 aa9.47□□□□□ -0.89
TVP23A-211ENST00000619408 KAT6BQ8WYB5 2073 aa9.47□□□□□ -0.89
TVP23A-211ENST00000619408 SRCAPQ6ZRS2 3230 aa9.47□□□□□ -0.89
TVP23A-211ENST00000619408 AFDNP55196 1824 aaKnown RBP9.47□□□□□ -0.89
TVP23A-211ENST00000619408 NBPF7P0C2Y1 421 aaPredicted RBP9.46□□□□□ -0.9
TVP23A-211ENST00000619408 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
TVP23A-211ENST00000619408 CRKLP46109 303 aaKnown RBP9.46□□□□□ -0.9
TVP23A-211ENST00000619408 TERF1P54274 439 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 NUCB1Q02818 461 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 GCKRQ14397 625 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 FAM182BQ5T319 152 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 FAM196AQ6ZSG2 479 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 TTLL7Q6ZT98 887 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 KRT27Q7Z3Y8 459 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 ZBTB3Q9H5J0 574 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 ZBTB1Q9Y2K1 713 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 UTYO14607 1347 aa9.46□□□□□ -0.9
TVP23A-211ENST00000619408 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
TVP23A-211ENST00000619408 IGKV5-2P06315 115 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 CLCN1P35523 988 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 ITPK1Q13572 414 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 HSP90AB3PQ58FF7 597 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 SKAP1Q86WV1 359 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 BCL11BQ9C0K0 894 aaPredicted RBP9.45□□□□□ -0.9
TVP23A-211ENST00000619408 DCTPP1Q9H773 170 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 CWC25Q9NXE8 425 aaPredicted RBP9.45□□□□□ -0.9
TVP23A-211ENST00000619408 MAP3K15Q6ZN16 1313 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 SBF2Q86WG5 1849 aa9.45□□□□□ -0.9
TVP23A-211ENST00000619408 ATP5J2-PTCD1G3V325 749 aa9.44□□□□□ -0.9
TVP23A-211ENST00000619408 RXRBP28702 533 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms