RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
TMPRSS4-220ENST00000618855 CALCOCO1Q9P1Z2 691 aa11.3□□□□□ -0.6
TMPRSS4-220ENST00000618855 CLTCL1P53675 1640 aa11.3□□□□□ -0.6
TMPRSS4-220ENST00000618855 SETD1BQ9UPS6 1966 aaKnown RBP11.3□□□□□ -0.6
TMPRSS4-220ENST00000618855 CCT4P50991 539 aaKnown RBP11.3□□□□□ -0.6
TMPRSS4-220ENST00000618855 IQSEC2Q5JU85 1478 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 GABPB1Q06547 395 aaPredicted RBP11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 ELF2Q15723 593 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 MNS1Q8NEH6 495 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 KIF18AQ8NI77 898 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 ZFP91Q96JP5 570 aaPredicted RBP11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 LAMC1P11047 1609 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 SKILP12757 684 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 NOL10Q9BSC4 688 aaKnown RBP11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 ZNF215Q9UL58 517 aaPredicted RBP11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
TMPRSS4-220ENST00000618855 CERS3Q8IU89 383 aa11.28□□□□□ -0.6
TMPRSS4-220ENST00000618855 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
TMPRSS4-220ENST00000618855 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
TMPRSS4-220ENST00000618855 CBX8Q9HC52 389 aa11.28□□□□□ -0.6
TMPRSS4-220ENST00000618855 KCNQ3O43525 872 aa11.27□□□□□ -0.6
TMPRSS4-220ENST00000618855 SMC2O95347 1197 aa11.27□□□□□ -0.6
TMPRSS4-220ENST00000618855 LIG1P18858 919 aa11.27□□□□□ -0.6
TMPRSS4-220ENST00000618855 ZNF397Q8NF99 534 aaPredicted RBP11.27□□□□□ -0.6
TMPRSS4-220ENST00000618855 MADDQ8WXG6 1647 aa11.27□□□□□ -0.6
TMPRSS4-220ENST00000618855 BTBD11A6QL63 1104 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 DDX11Q96FC9 970 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 PNMA6EA0A0J9YXQ4 647 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 SRGAP3O43295 1099 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 PPFIA3O75145 1194 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 SDF4Q9BRK5 362 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.61
TMPRSS4-220ENST00000618855 PDCP20941 246 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 PHAXQ9H814 394 aaKnown RBP11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 ARGLU1Q9NWB6 273 aaPredicted RBP11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 RTL1A6NKG5 1358 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 AP5Z1O43299 807 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 RAB11FIP3O75154 756 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 IL13P35225 146 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 TMEM2Q9UHN6 1383 aa11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 SF3A1Q15459 793 aaKnown RBP11.26□□□□□ -0.61
TMPRSS4-220ENST00000618855 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 ATP5J2-PTCD1G3V325 749 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 CACTINQ8WUQ7 758 aaKnown RBP11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 ANKRD7Q92527 254 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 UBXN4Q92575 508 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 SNX14Q9Y5W7 946 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 GCP02774 474 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 ZNF75DP51815 510 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 GPS2Q13227 327 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 ST7Q9NRC1 585 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 CFAP74Q9C0B2 1584 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 MLH3Q9UHC1 1453 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 PTPRCP08575 1304 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 TERF2Q15554 542 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 DDX41Q9UJV9 622 aaKnown RBP11.25□□□□□ -0.61
TMPRSS4-220ENST00000618855 BMS1Q14692 1282 aaKnown RBP11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 SKIDA1Q1XH10 827 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 RUFY3Q7L099 469 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 TTC6Q86TZ1 520 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 CCDC69A6NI79 296 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 SLU7O95391 586 aaKnown RBP11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 ARID5BQ14865 1188 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 TMCO3Q6UWJ1 677 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
TMPRSS4-220ENST00000618855 PRAMEF22A3QJZ6 481 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 HSPA4P34932 840 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 ABCC3O15438 1527 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 LARGE1O95461 756 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 SLFN14P0C7P3 912 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 SNW1Q13573 536 aaKnown RBP11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 CHMP4CQ96CF2 233 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 TMX1Q9H3N1 280 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 DDX19AQ9NUU7 478 aaKnown RBP11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 MTMR6Q9Y217 621 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 MRVI1Q9Y6F6 885 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 TRPM2O94759 1503 aa11.23□□□□□ -0.61
TMPRSS4-220ENST00000618855 A0A087WWV3 80 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms