RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 POLA2Q14181 598 aa12.42□□□□□ -0.42
AL353770.3-201ENST00000616253 DDB1Q16531 1140 aa12.42□□□□□ -0.42
AL353770.3-201ENST00000616253 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
AL353770.3-201ENST00000616253 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 C8orf37Q96NL8 207 aa12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 UTYO14607 1347 aa12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 UNC5CLQ8IV45 518 aa12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
AL353770.3-201ENST00000616253 GSPT1P15170 499 aaKnown RBP12.4□□□□□ -0.42
AL353770.3-201ENST00000616253 TTC22Q5TAA0 569 aa12.4□□□□□ -0.42
AL353770.3-201ENST00000616253 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
AL353770.3-201ENST00000616253 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
AL353770.3-201ENST00000616253 SUCLG2Q96I99 432 aa12.4□□□□□ -0.42
AL353770.3-201ENST00000616253 UPF2Q9HAU5 1272 aaKnown RBP12.4□□□□□ -0.42
AL353770.3-201ENST00000616253 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.42
AL353770.3-201ENST00000616253 MTX1Q13505 466 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 GCKRQ14397 625 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 BCL9LQ86UU0 1499 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 SURF6O75683 361 aaKnown RBP12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 TJP1Q07157 1748 aa12.39□□□□□ -0.43
AL353770.3-201ENST00000616253 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 MARCH10Q8NA82 808 aaPredicted RBP12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 TEX13AQ9BXU3 409 aaPredicted RBP12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 TUBGCP6Q96RT7 1819 aa12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 TBC1D32Q96NH3 1257 aa12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
AL353770.3-201ENST00000616253 A0A0G2JS52 829 aa12.37□□□□□ -0.43
AL353770.3-201ENST00000616253 VPS72Q15906 364 aa12.37□□□□□ -0.43
AL353770.3-201ENST00000616253 SALL3Q9BXA9 1300 aa12.37□□□□□ -0.43
AL353770.3-201ENST00000616253 STARD3NLO95772 234 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 PDE1AP54750 535 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 FAM98CQ17RN3 349 aaKnown RBP12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 ACSBG1Q96GR2 724 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 CDC45O75419 566 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 MX1P20591 662 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 HSP90AB4PQ58FF6 505 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 IL1RAPL2Q9NP60 686 aa12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
AL353770.3-201ENST00000616253 OS9Q13438 667 aaPredicted RBP12.35□□□□□ -0.43
AL353770.3-201ENST00000616253 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
AL353770.3-201ENST00000616253 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
AL353770.3-201ENST00000616253 FNBP4Q8N3X1 1017 aaPredicted RBP12.35□□□□□ -0.43
AL353770.3-201ENST00000616253 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
AL353770.3-201ENST00000616253 KIF1BPQ96EK5 621 aa12.35□□□□□ -0.43
AL353770.3-201ENST00000616253 AFF2P51816 1311 aa12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 A0A087WZG4 1122 aa12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 PA2G4Q9UQ80 394 aaKnown RBP12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 COL15A1P39059 1388 aa12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 CYP19A1P11511 503 aaPredicted RBP12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 SDSP20132 328 aa12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 EPHA10Q5JZY3 1008 aa12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 CWC25Q9NXE8 425 aaPredicted RBP12.34□□□□□ -0.43
AL353770.3-201ENST00000616253 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
AL353770.3-201ENST00000616253 USP21Q9UK80 565 aa12.33□□□□□ -0.44
AL353770.3-201ENST00000616253 THSD7AQ9UPZ6 1657 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 CASP7P55210 303 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 CICQ96RK0 1608 aaPredicted RBP12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 ANKRD36CQ5JPF3 1778 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 AK9Q5TCS8 1911 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 AOX1Q06278 1338 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
AL353770.3-201ENST00000616253 H7C1W4 665 aa12.31□□□□□ -0.44
AL353770.3-201ENST00000616253 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
AL353770.3-201ENST00000616253 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
AL353770.3-201ENST00000616253 MAP3K15Q6ZN16 1313 aa12.31□□□□□ -0.44
AL353770.3-201ENST00000616253 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 ARXQ96QS3 562 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 ISCA1Q9BUE6 129 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 SIL1Q9H173 461 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 RREB1Q92766 1687 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 NUP98P52948 1817 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 KCNQ2O43526 872 aa12.3□□□□□ -0.44
AL353770.3-201ENST00000616253 SLC4A3P48751 1232 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms