RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CCNL1Q9UK58 526 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 MINDY4BA8MYZ0 360 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 JARID2Q92833 1246 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 PCMTD1Q96MG8 357 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 MEIS3Q99687 375 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 FAM135BQ49AJ0 1406 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 KIF1BO60333 1816 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 KDM5AP29375 1690 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 K7ELQ4 463 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 BAG3O95817 575 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 STK38Q15208 465 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 SDF4Q9BRK5 362 aa11.17□□□□□ -0.62
CLTCL1-208ENST00000615606 PDIA4P13667 645 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 NOL7Q9UMY1 257 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 MPHOSPH10O00566 681 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 GNPATO15228 680 aa11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 RHPN1Q8TCX5 695 aa11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 SLC52A2Q9HAB3 445 aa11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 PIP4K2AP48426 406 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
CLTCL1-208ENST00000615606 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 GSTO1P78417 241 aa11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 GOLIM4O00461 696 aa11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 ATP8B2P98198 1209 aa11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 ATP2B3Q16720 1220 aa11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 ZGPATQ8N5A5 531 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 OLFM4Q6UX06 510 aa11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 ZNF444Q8N0Y2 327 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
CLTCL1-208ENST00000615606 WDHD1O75717 1129 aaPredicted RBP11.15□□□□□ -0.63
CLTCL1-208ENST00000615606 CASTP20810 708 aaKnown RBP11.15□□□□□ -0.63
CLTCL1-208ENST00000615606 HDAC1Q13547 482 aaPredicted RBP11.15□□□□□ -0.63
CLTCL1-208ENST00000615606 ZNF213O14771 459 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 MBD3O95983 291 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 PARP10Q53GL7 1025 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 IQCA1Q86XH1 822 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 ATP7BP35670 1465 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 IRS4O14654 1257 aaPredicted RBP11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 KINO60870 393 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 LARP1BQ659C4 914 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 NAT10Q9H0A0 1025 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 PRIM1P49642 420 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-208ENST00000615606 INSRP06213 1382 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 A2ML1A8K2U0 1454 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 IQGAP3Q86VI3 1631 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 ZFYP08048 801 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 PLBD2Q8NHP8 589 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 KRT24Q2M2I5 525 aa11.13□□□□□ -0.63
CLTCL1-208ENST00000615606 CHL1O00533 1208 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 MYO1BO43795 1136 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 NOC3LQ8WTT2 800 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 LETM1O95202 739 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 HLA-DOAP06340 250 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 BMP2KLQ5H9B9 411 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 MAP3K4Q9Y6R4 1608 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 RANBP6O60518 1105 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 SEC63Q9UGP8 760 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 HDAC9Q9UKV0 1011 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 ZNF335Q9H4Z2 1342 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 KAT6BQ8WYB5 2073 aa11.12□□□□□ -0.63
CLTCL1-208ENST00000615606 KRT18P05783 430 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 ANKRD2Q9GZV1 360 aa11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 CCDC87Q9NVE4 849 aa11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 KRT85P78386 507 aa11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 ARID3AQ99856 593 aa11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 AATKQ6ZMQ8 1374 aa11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 FIBPO43427 364 aa11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 CWF19L2Q2TBE0 894 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 EYA3Q99504 573 aa11.11□□□□□ -0.63
CLTCL1-208ENST00000615606 TTC22Q5TAA0 569 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 CNBD1Q8NA66 436 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 RTL1A6NKG5 1358 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 PDE4BQ07343 736 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 SH2B1Q9NRF2 756 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 USP6P35125 1406 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 GSE1Q14687 1217 aa11.1□□□□□ -0.63
CLTCL1-208ENST00000615606 RBM17Q96I25 401 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms