RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
CBWD1-220ENST00000612045 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
CBWD1-220ENST00000612045 CHD1LQ86WJ1 897 aa15.36■□□□□ 0.05
CBWD1-220ENST00000612045 TJP1Q07157 1748 aa15.36■□□□□ 0.05
CBWD1-220ENST00000612045 GRM8O00222 908 aa15.36■□□□□ 0.05
CBWD1-220ENST00000612045 ANKRD45Q5TZF3 282 aa15.36■□□□□ 0.05
CBWD1-220ENST00000612045 SEPT12Q8IYM1 358 aa15.36■□□□□ 0.05
CBWD1-220ENST00000612045 SMARCC1Q92922 1105 aaPredicted RBP15.36■□□□□ 0.05
CBWD1-220ENST00000612045 UTYO14607 1347 aa15.35■□□□□ 0.05
CBWD1-220ENST00000612045 PALLDQ8WX93 1383 aa15.35■□□□□ 0.05
CBWD1-220ENST00000612045 LOC102724428A0A0B4J2F2 783 aa15.35■□□□□ 0.05
CBWD1-220ENST00000612045 PNMA6EA0A0J9YXQ4 647 aa15.35■□□□□ 0.05
CBWD1-220ENST00000612045 PDE4AP27815 886 aa15.35■□□□□ 0.05
CBWD1-220ENST00000612045 SIK1P57059 783 aa15.35■□□□□ 0.05
CBWD1-220ENST00000612045 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
CBWD1-220ENST00000612045 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
CBWD1-220ENST00000612045 GCKRQ14397 625 aa15.34■□□□□ 0.05
CBWD1-220ENST00000612045 HDAC5Q9UQL6 1122 aa15.34■□□□□ 0.05
CBWD1-220ENST00000612045 NUP188Q5SRE5 1749 aa15.34■□□□□ 0.05
CBWD1-220ENST00000612045 ZNF330Q9Y3S2 320 aaPredicted RBP15.33■□□□□ 0.05
CBWD1-220ENST00000612045 FAM182BQ5T319 152 aa15.33■□□□□ 0.04
CBWD1-220ENST00000612045 ZBTB3Q9H5J0 574 aa15.33■□□□□ 0.04
CBWD1-220ENST00000612045 ZBTB1Q9Y2K1 713 aa15.33■□□□□ 0.04
CBWD1-220ENST00000612045 RBM19Q9Y4C8 960 aaKnown RBP15.33■□□□□ 0.04
CBWD1-220ENST00000612045 ATP5J2-PTCD1G3V325 749 aa15.32■□□□□ 0.04
CBWD1-220ENST00000612045 PPP1R42Q7Z4L9 355 aa15.32■□□□□ 0.04
CBWD1-220ENST00000612045 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
CBWD1-220ENST00000612045 CICQ96RK0 1608 aaPredicted RBP15.32■□□□□ 0.04
CBWD1-220ENST00000612045 ITPK1Q13572 414 aa15.31■□□□□ 0.04
CBWD1-220ENST00000612045 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
CBWD1-220ENST00000612045 PTF1AQ7RTS3 328 aa15.31■□□□□ 0.04
CBWD1-220ENST00000612045 BACH2Q9BYV9 841 aa15.31■□□□□ 0.04
CBWD1-220ENST00000612045 AFDNP55196 1824 aaKnown RBP15.31■□□□□ 0.04
CBWD1-220ENST00000612045 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
CBWD1-220ENST00000612045 SRGAP3O43295 1099 aa15.31■□□□□ 0.04
CBWD1-220ENST00000612045 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
CBWD1-220ENST00000612045 POLA2Q14181 598 aa15.31■□□□□ 0.04
CBWD1-220ENST00000612045 MTX1Q13505 466 aa15.3■□□□□ 0.04
CBWD1-220ENST00000612045 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
CBWD1-220ENST00000612045 INTS5Q6P9B9 1019 aaKnown RBP15.3■□□□□ 0.04
CBWD1-220ENST00000612045 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
CBWD1-220ENST00000612045 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
CBWD1-220ENST00000612045 ZNF772Q68DY9 489 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-220ENST00000612045 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-220ENST00000612045 EXOC6BQ9Y2D4 811 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 ZNF831Q5JPB2 1677 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 MAP3K15Q6ZN16 1313 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 EP400Q96L91 3159 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 BTAF1O14981 1849 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 APBB1O00213 710 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 CRKLP46109 303 aaKnown RBP15.29■□□□□ 0.04
CBWD1-220ENST00000612045 ARXQ96QS3 562 aa15.29■□□□□ 0.04
CBWD1-220ENST00000612045 BICC1Q9H694 974 aaKnown RBP15.29■□□□□ 0.04
CBWD1-220ENST00000612045 CWC25Q9NXE8 425 aaPredicted RBP15.29■□□□□ 0.04
CBWD1-220ENST00000612045 A0A087WZG4 1122 aa15.28■□□□□ 0.04
CBWD1-220ENST00000612045 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
CBWD1-220ENST00000612045 C8orf34Q49A92 452 aa15.28■□□□□ 0.04
CBWD1-220ENST00000612045 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
CBWD1-220ENST00000612045 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
CBWD1-220ENST00000612045 RREB1Q92766 1687 aa15.27■□□□□ 0.04
CBWD1-220ENST00000612045 SMARCA5O60264 1052 aaPredicted RBP15.27■□□□□ 0.04
CBWD1-220ENST00000612045 ADRA2BP18089 450 aa15.27■□□□□ 0.04
CBWD1-220ENST00000612045 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
CBWD1-220ENST00000612045 UBE3BQ7Z3V4 1068 aa15.27■□□□□ 0.04
CBWD1-220ENST00000612045 NPM2Q86SE8 214 aaKnown RBP15.27■□□□□ 0.04
CBWD1-220ENST00000612045 ISCA1Q9BUE6 129 aa15.27■□□□□ 0.04
CBWD1-220ENST00000612045 CASP7P55210 303 aa15.27■□□□□ 0.03
CBWD1-220ENST00000612045 GIGYF2Q6Y7W6 1299 aaKnown RBP15.27■□□□□ 0.03
CBWD1-220ENST00000612045 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
CBWD1-220ENST00000612045 COL15A1P39059 1388 aa15.26■□□□□ 0.03
CBWD1-220ENST00000612045 MYH14Q7Z406 1995 aaKnown RBP15.26■□□□□ 0.03
CBWD1-220ENST00000612045 H7C1W4 665 aa15.26■□□□□ 0.03
CBWD1-220ENST00000612045 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
CBWD1-220ENST00000612045 RBM6P78332 1123 aaKnown RBP15.26■□□□□ 0.03
CBWD1-220ENST00000612045 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
CBWD1-220ENST00000612045 HLFQ16534 295 aa15.26■□□□□ 0.03
CBWD1-220ENST00000612045 KRT27Q7Z3Y8 459 aa15.26■□□□□ 0.03
CBWD1-220ENST00000612045 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
CBWD1-220ENST00000612045 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
CBWD1-220ENST00000612045 ERVV-1B6SEH8 477 aa15.25■□□□□ 0.03
CBWD1-220ENST00000612045 EPHA10Q5JZY3 1008 aa15.25■□□□□ 0.03
CBWD1-220ENST00000612045 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
CBWD1-220ENST00000612045 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
CBWD1-220ENST00000612045 LINC00116Q8NCU8 138 aa15.25■□□□□ 0.03
CBWD1-220ENST00000612045 RAB11FIP3O75154 756 aa15.24■□□□□ 0.03
CBWD1-220ENST00000612045 HSP90AB3PQ58FF7 597 aa15.24■□□□□ 0.03
CBWD1-220ENST00000612045 PLEKHM2Q8IWE5 1019 aa15.24■□□□□ 0.03
CBWD1-220ENST00000612045 BCL11BQ9C0K0 894 aaPredicted RBP15.24■□□□□ 0.03
CBWD1-220ENST00000612045 TBC1D2BQ9UPU7 963 aa15.24■□□□□ 0.03
CBWD1-220ENST00000612045 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
CBWD1-220ENST00000612045 FAM196AQ6ZSG2 479 aa15.24■□□□□ 0.03
CBWD1-220ENST00000612045 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
CBWD1-220ENST00000612045 NOP58Q9Y2X3 529 aaKnown RBP15.24■□□□□ 0.03
CBWD1-220ENST00000612045 KCNQ4P56696 695 aa15.23■□□□□ 0.03
CBWD1-220ENST00000612045 RABL6Q3YEC7 729 aaPredicted RBP15.23■□□□□ 0.03
CBWD1-220ENST00000612045 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
CBWD1-220ENST00000612045 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
CBWD1-220ENST00000612045 CCNL1Q9UK58 526 aaPredicted RBP15.22■□□□□ 0.03
CBWD1-220ENST00000612045 CNTNAP4Q9C0A0 1308 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms