RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 MYD88Q99836 296 aa28.3■■■□□ 2.12
COMMD7-204ENST00000610160 TRPC5Q9UL62 973 aaPredicted RBP28.3■■■□□ 2.12
COMMD7-204ENST00000610160 UTYO14607 1347 aa28.3■■■□□ 2.12
COMMD7-204ENST00000610160 NEURL1BA8MQ27 555 aa28.3■■■□□ 2.12
COMMD7-204ENST00000610160 PNMA6EA0A0J9YXQ4 647 aa28.29■■■□□ 2.12
COMMD7-204ENST00000610160 GRM8O00222 908 aa28.29■■■□□ 2.12
COMMD7-204ENST00000610160 FAM161AQ3B820 660 aa28.29■■■□□ 2.12
COMMD7-204ENST00000610160 TTLL7Q6ZT98 887 aa28.28■■■□□ 2.12
COMMD7-204ENST00000610160 CYP19A1P11511 503 aaPredicted RBP28.27■■■□□ 2.12
COMMD7-204ENST00000610160 HDAC5Q9UQL6 1122 aa28.27■■■□□ 2.12
COMMD7-204ENST00000610160 C8orf34Q49A92 452 aa28.26■■■□□ 2.11
COMMD7-204ENST00000610160 GCKRQ14397 625 aa28.26■■■□□ 2.11
COMMD7-204ENST00000610160 KCNQ2O43526 872 aa28.25■■■□□ 2.11
COMMD7-204ENST00000610160 PALLDQ8WX93 1383 aa28.25■■■□□ 2.11
COMMD7-204ENST00000610160 NHSQ6T4R5 1651 aa28.25■■■□□ 2.11
COMMD7-204ENST00000610160 SSH3Q8TE77 659 aa28.24■■■□□ 2.11
COMMD7-204ENST00000610160 PPP1R42Q7Z4L9 355 aa28.24■■■□□ 2.11
COMMD7-204ENST00000610160 ONECUT3O60422 494 aaPredicted RBP28.23■■■□□ 2.11
COMMD7-204ENST00000610160 SMARCC1Q92922 1105 aaPredicted RBP28.23■■■□□ 2.11
COMMD7-204ENST00000610160 ZNF831Q5JPB2 1677 aa28.23■■■□□ 2.11
COMMD7-204ENST00000610160 POLA2Q14181 598 aa28.22■■■□□ 2.11
COMMD7-204ENST00000610160 MTX1Q13505 466 aa28.22■■■□□ 2.11
COMMD7-204ENST00000610160 ZBTB47Q9UFB7 747 aaPredicted RBP28.22■■■□□ 2.11
COMMD7-204ENST00000610160 RREB1Q92766 1687 aa28.21■■■□□ 2.11
COMMD7-204ENST00000610160 LOC102724428A0A0B4J2F2 783 aa28.21■■■□□ 2.11
COMMD7-204ENST00000610160 SIK1P57059 783 aa28.21■■■□□ 2.11
COMMD7-204ENST00000610160 ZBTB3Q9H5J0 574 aa28.21■■■□□ 2.11
COMMD7-204ENST00000610160 ZNF330Q9Y3S2 320 aaPredicted RBP28.21■■■□□ 2.11
COMMD7-204ENST00000610160 EXOC6BQ9Y2D4 811 aa28.2■■■□□ 2.11
COMMD7-204ENST00000610160 SRGAP3O43295 1099 aa28.2■■■□□ 2.1
COMMD7-204ENST00000610160 SUCLG2Q96I99 432 aa28.2■■■□□ 2.1
COMMD7-204ENST00000610160 ZBTB1Q9Y2K1 713 aa28.2■■■□□ 2.1
COMMD7-204ENST00000610160 BTAF1O14981 1849 aa28.19■■■□□ 2.1
COMMD7-204ENST00000610160 ATP5J2-PTCD1G3V325 749 aa28.19■■■□□ 2.1
COMMD7-204ENST00000610160 COL5A3P25940 1745 aaPredicted RBP28.19■■■□□ 2.1
COMMD7-204ENST00000610160 ATP6V1AP38606 617 aa28.19■■■□□ 2.1
COMMD7-204ENST00000610160 KIF6Q6ZMV9 814 aa28.19■■■□□ 2.1
COMMD7-204ENST00000610160 APBB1O00213 710 aa28.18■■■□□ 2.1
COMMD7-204ENST00000610160 QTRT2Q9H974 415 aaKnown RBP28.18■■■□□ 2.1
COMMD7-204ENST00000610160 KAZALD1Q96I82 304 aa28.17■■■□□ 2.1
COMMD7-204ENST00000610160 SBF2Q86WG5 1849 aa28.16■■■□□ 2.1
COMMD7-204ENST00000610160 SEPT12Q8IYM1 358 aa28.16■■■□□ 2.1
COMMD7-204ENST00000610160 BICC1Q9H694 974 aaKnown RBP28.16■■■□□ 2.1
COMMD7-204ENST00000610160 COL15A1P39059 1388 aa28.16■■■□□ 2.1
COMMD7-204ENST00000610160 IL6STP40189 918 aaPredicted RBP28.15■■■□□ 2.1
COMMD7-204ENST00000610160 SMARCA5O60264 1052 aaPredicted RBP28.15■■■□□ 2.1
COMMD7-204ENST00000610160 ITPK1Q13572 414 aa28.15■■■□□ 2.1
COMMD7-204ENST00000610160 MAP3K15Q6ZN16 1313 aa28.14■■■□□ 2.1
COMMD7-204ENST00000610160 A0A087WZG4 1122 aa28.14■■■□□ 2.1
COMMD7-204ENST00000610160 CWC25Q9NXE8 425 aaPredicted RBP28.14■■■□□ 2.1
COMMD7-204ENST00000610160 UBE3BQ7Z3V4 1068 aa28.13■■■□□ 2.09
COMMD7-204ENST00000610160 LRRCC1Q9C099 1032 aa28.13■■■□□ 2.09
COMMD7-204ENST00000610160 CCDC87Q9NVE4 849 aa28.13■■■□□ 2.09
COMMD7-204ENST00000610160 ANKRD36CQ5JPF3 1778 aa28.13■■■□□ 2.09
COMMD7-204ENST00000610160 FAM182BQ5T319 152 aa28.13■■■□□ 2.09
COMMD7-204ENST00000610160 CCDC191Q8NCU4 936 aa28.13■■■□□ 2.09
COMMD7-204ENST00000610160 MYH14Q7Z406 1995 aaKnown RBP28.12■■■□□ 2.09
COMMD7-204ENST00000610160 CRKLP46109 303 aaKnown RBP28.12■■■□□ 2.09
COMMD7-204ENST00000610160 PLEKHM2Q8IWE5 1019 aa28.12■■■□□ 2.09
COMMD7-204ENST00000610160 SURF6O75683 361 aaKnown RBP28.11■■■□□ 2.09
COMMD7-204ENST00000610160 TCIRG1Q13488 830 aa28.11■■■□□ 2.09
COMMD7-204ENST00000610160 INTS5Q6P9B9 1019 aaKnown RBP28.11■■■□□ 2.09
COMMD7-204ENST00000610160 PTF1AQ7RTS3 328 aa28.11■■■□□ 2.09
COMMD7-204ENST00000610160 ISCA1Q9BUE6 129 aa28.11■■■□□ 2.09
COMMD7-204ENST00000610160 CASP7P55210 303 aa28.11■■■□□ 2.09
COMMD7-204ENST00000610160 BMP2KLQ5H9B9 411 aa28.11■■■□□ 2.09
COMMD7-204ENST00000610160 C16orf71Q8IYS4 520 aaPredicted RBP28.11■■■□□ 2.09
COMMD7-204ENST00000610160 RAB11FIP3O75154 756 aa28.1■■■□□ 2.09
COMMD7-204ENST00000610160 H7C1W4 665 aa28.1■■■□□ 2.09
COMMD7-204ENST00000610160 GIGYF2Q6Y7W6 1299 aaKnown RBP28.1■■■□□ 2.09
COMMD7-204ENST00000610160 NUP98P52948 1817 aa28.09■■■□□ 2.09
COMMD7-204ENST00000610160 NPM2Q86SE8 214 aaKnown RBP28.09■■■□□ 2.09
COMMD7-204ENST00000610160 OTUD7AQ8TE49 926 aaPredicted RBP28.09■■■□□ 2.09
COMMD7-204ENST00000610160 ARXQ96QS3 562 aa28.09■■■□□ 2.09
COMMD7-204ENST00000610160 BCL11AQ9H165 835 aa28.09■■■□□ 2.09
COMMD7-204ENST00000610160 NOP58Q9Y2X3 529 aaKnown RBP28.09■■■□□ 2.09
COMMD7-204ENST00000610160 EIF5P55010 431 aaKnown RBP28.08■■■□□ 2.09
COMMD7-204ENST00000610160 TRIM28Q13263 835 aaKnown RBP28.08■■■□□ 2.09
COMMD7-204ENST00000610160 HSP90AB4PQ58FF6 505 aa28.08■■■□□ 2.09
COMMD7-204ENST00000610160 EPHA10Q5JZY3 1008 aa28.08■■■□□ 2.09
COMMD7-204ENST00000610160 JARID2Q92833 1246 aaPredicted RBP28.08■■■□□ 2.09
COMMD7-204ENST00000610160 BRWD3Q6RI45 1802 aa28.08■■■□□ 2.08
COMMD7-204ENST00000610160 DZIP3Q86Y13 1208 aaKnown RBP28.07■■■□□ 2.08
COMMD7-204ENST00000610160 RABL6Q3YEC7 729 aaPredicted RBP28.06■■■□□ 2.08
COMMD7-204ENST00000610160 LY75O60449 1722 aa28.06■■■□□ 2.08
COMMD7-204ENST00000610160 ERVV-1B6SEH8 477 aa28.06■■■□□ 2.08
COMMD7-204ENST00000610160 HSP90AB3PQ58FF7 597 aa28.06■■■□□ 2.08
COMMD7-204ENST00000610160 HLFQ16534 295 aa28.05■■■□□ 2.08
COMMD7-204ENST00000610160 KIF1BPQ96EK5 621 aa28.05■■■□□ 2.08
COMMD7-204ENST00000610160 RHPN1Q8TCX5 695 aa28.04■■■□□ 2.08
COMMD7-204ENST00000610160 TBC1D2BQ9UPU7 963 aa28.04■■■□□ 2.08
COMMD7-204ENST00000610160 SALL3Q9BXA9 1300 aa28.04■■■□□ 2.08
COMMD7-204ENST00000610160 TTC22Q5TAA0 569 aa28.03■■■□□ 2.08
COMMD7-204ENST00000610160 LINC00116Q8NCU8 138 aa28.03■■■□□ 2.08
COMMD7-204ENST00000610160 ZNF772Q68DY9 489 aaPredicted RBP28.02■■■□□ 2.08
COMMD7-204ENST00000610160 PA2G4Q9UQ80 394 aaKnown RBP28.02■■■□□ 2.08
COMMD7-204ENST00000610160 GSPT1P15170 499 aaKnown RBP28.02■■■□□ 2.08
COMMD7-204ENST00000610160 OSBPL3Q9H4L5 887 aa28.02■■■□□ 2.08
COMMD7-204ENST00000610160 OS9Q13438 667 aaPredicted RBP28.01■■■□□ 2.07
COMMD7-204ENST00000610160 CNTNAP4Q9C0A0 1308 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms