RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ONECUT3O60422 494 aaPredicted RBP26.89■■□□□ 1.9
USP6NL-204ENST00000606752 CYP19A1P11511 503 aaPredicted RBP26.89■■□□□ 1.9
USP6NL-204ENST00000606752 FAM161AQ3B820 660 aa26.89■■□□□ 1.9
USP6NL-204ENST00000606752 TTLL7Q6ZT98 887 aa26.89■■□□□ 1.9
USP6NL-204ENST00000606752 PNMA6EA0A0J9YXQ4 647 aa26.88■■□□□ 1.89
USP6NL-204ENST00000606752 KCNQ2O43526 872 aa26.87■■□□□ 1.89
USP6NL-204ENST00000606752 GCKRQ14397 625 aa26.87■■□□□ 1.89
USP6NL-204ENST00000606752 SMARCC1Q92922 1105 aaPredicted RBP26.87■■□□□ 1.89
USP6NL-204ENST00000606752 THSD7AQ9UPZ6 1657 aa26.87■■□□□ 1.89
USP6NL-204ENST00000606752 SSH3Q8TE77 659 aa26.86■■□□□ 1.89
USP6NL-204ENST00000606752 ZBTB47Q9UFB7 747 aaPredicted RBP26.86■■□□□ 1.89
USP6NL-204ENST00000606752 PPP1R42Q7Z4L9 355 aa26.85■■□□□ 1.89
USP6NL-204ENST00000606752 QTRT2Q9H974 415 aaKnown RBP26.85■■□□□ 1.89
USP6NL-204ENST00000606752 LOC102724428A0A0B4J2F2 783 aa26.83■■□□□ 1.89
USP6NL-204ENST00000606752 SIK1P57059 783 aa26.83■■□□□ 1.89
USP6NL-204ENST00000606752 POLA2Q14181 598 aa26.83■■□□□ 1.89
USP6NL-204ENST00000606752 C8orf34Q49A92 452 aa26.83■■□□□ 1.89
USP6NL-204ENST00000606752 MTX1Q13505 466 aa26.83■■□□□ 1.89
USP6NL-204ENST00000606752 PALLDQ8WX93 1383 aa26.82■■□□□ 1.88
USP6NL-204ENST00000606752 ATP5J2-PTCD1G3V325 749 aa26.81■■□□□ 1.88
USP6NL-204ENST00000606752 SRGAP3O43295 1099 aa26.81■■□□□ 1.88
USP6NL-204ENST00000606752 ATP6V1AP38606 617 aa26.81■■□□□ 1.88
USP6NL-204ENST00000606752 ZBTB3Q9H5J0 574 aa26.81■■□□□ 1.88
USP6NL-204ENST00000606752 ZNF330Q9Y3S2 320 aaPredicted RBP26.81■■□□□ 1.88
USP6NL-204ENST00000606752 KIF6Q6ZMV9 814 aa26.8■■□□□ 1.88
USP6NL-204ENST00000606752 SEPT12Q8IYM1 358 aa26.8■■□□□ 1.88
USP6NL-204ENST00000606752 SUCLG2Q96I99 432 aa26.8■■□□□ 1.88
USP6NL-204ENST00000606752 EXOC6BQ9Y2D4 811 aa26.8■■□□□ 1.88
USP6NL-204ENST00000606752 ZBTB1Q9Y2K1 713 aa26.8■■□□□ 1.88
USP6NL-204ENST00000606752 ARFGEF2Q9Y6D5 1785 aa26.8■■□□□ 1.88
USP6NL-204ENST00000606752 KAZALD1Q96I82 304 aa26.79■■□□□ 1.88
USP6NL-204ENST00000606752 APBB1O00213 710 aa26.78■■□□□ 1.88
USP6NL-204ENST00000606752 IL6STP40189 918 aaPredicted RBP26.78■■□□□ 1.88
USP6NL-204ENST00000606752 A0A087WZG4 1122 aa26.77■■□□□ 1.88
USP6NL-204ENST00000606752 TJP1Q07157 1748 aa26.77■■□□□ 1.88
USP6NL-204ENST00000606752 CCDC191Q8NCU4 936 aa26.76■■□□□ 1.88
USP6NL-204ENST00000606752 CWC25Q9NXE8 425 aaPredicted RBP26.76■■□□□ 1.88
USP6NL-204ENST00000606752 TCIRG1Q13488 830 aa26.76■■□□□ 1.87
USP6NL-204ENST00000606752 ITPK1Q13572 414 aa26.76■■□□□ 1.87
USP6NL-204ENST00000606752 LRRCC1Q9C099 1032 aa26.76■■□□□ 1.87
USP6NL-204ENST00000606752 BICC1Q9H694 974 aaKnown RBP26.76■■□□□ 1.87
USP6NL-204ENST00000606752 MAP3K15Q6ZN16 1313 aa26.76■■□□□ 1.87
USP6NL-204ENST00000606752 SMARCA5O60264 1052 aaPredicted RBP26.75■■□□□ 1.87
USP6NL-204ENST00000606752 RAB11FIP3O75154 756 aa26.75■■□□□ 1.87
USP6NL-204ENST00000606752 INTS5Q6P9B9 1019 aaKnown RBP26.75■■□□□ 1.87
USP6NL-204ENST00000606752 NPM2Q86SE8 214 aaKnown RBP26.75■■□□□ 1.87
USP6NL-204ENST00000606752 CCDC87Q9NVE4 849 aa26.75■■□□□ 1.87
USP6NL-204ENST00000606752 SURF6O75683 361 aaKnown RBP26.74■■□□□ 1.87
USP6NL-204ENST00000606752 FAM182BQ5T319 152 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 PLEKHM2Q8IWE5 1019 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 ISCA1Q9BUE6 129 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 NUP188Q5SRE5 1749 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 COL15A1P39059 1388 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 H7C1W4 665 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 CRKLP46109 303 aaKnown RBP26.74■■□□□ 1.87
USP6NL-204ENST00000606752 TRIM28Q13263 835 aaKnown RBP26.74■■□□□ 1.87
USP6NL-204ENST00000606752 UBE3BQ7Z3V4 1068 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 C16orf71Q8IYS4 520 aaPredicted RBP26.74■■□□□ 1.87
USP6NL-204ENST00000606752 ARXQ96QS3 562 aa26.74■■□□□ 1.87
USP6NL-204ENST00000606752 CASP7P55210 303 aa26.73■■□□□ 1.87
USP6NL-204ENST00000606752 HSP90AB4PQ58FF6 505 aa26.73■■□□□ 1.87
USP6NL-204ENST00000606752 EIF5P55010 431 aaKnown RBP26.72■■□□□ 1.87
USP6NL-204ENST00000606752 GIGYF2Q6Y7W6 1299 aaKnown RBP26.72■■□□□ 1.87
USP6NL-204ENST00000606752 PTF1AQ7RTS3 328 aa26.72■■□□□ 1.87
USP6NL-204ENST00000606752 NOP58Q9Y2X3 529 aaKnown RBP26.72■■□□□ 1.87
USP6NL-204ENST00000606752 BMP2KLQ5H9B9 411 aa26.72■■□□□ 1.87
USP6NL-204ENST00000606752 CICQ96RK0 1608 aaPredicted RBP26.71■■□□□ 1.87
USP6NL-204ENST00000606752 ERVV-1B6SEH8 477 aa26.7■■□□□ 1.87
USP6NL-204ENST00000606752 HSP90AB3PQ58FF7 597 aa26.7■■□□□ 1.87
USP6NL-204ENST00000606752 JARID2Q92833 1246 aaPredicted RBP26.7■■□□□ 1.87
USP6NL-204ENST00000606752 EPHA10Q5JZY3 1008 aa26.69■■□□□ 1.86
USP6NL-204ENST00000606752 DZIP3Q86Y13 1208 aaKnown RBP26.69■■□□□ 1.86
USP6NL-204ENST00000606752 BCL11AQ9H165 835 aa26.69■■□□□ 1.86
USP6NL-204ENST00000606752 AFDNP55196 1824 aaKnown RBP26.69■■□□□ 1.86
USP6NL-204ENST00000606752 RABL6Q3YEC7 729 aaPredicted RBP26.68■■□□□ 1.86
USP6NL-204ENST00000606752 ZNF772Q68DY9 489 aaPredicted RBP26.68■■□□□ 1.86
USP6NL-204ENST00000606752 OTUD7AQ8TE49 926 aaPredicted RBP26.68■■□□□ 1.86
USP6NL-204ENST00000606752 HLFQ16534 295 aa26.67■■□□□ 1.86
USP6NL-204ENST00000606752 KIF1BPQ96EK5 621 aa26.67■■□□□ 1.86
USP6NL-204ENST00000606752 TBC1D2BQ9UPU7 963 aa26.67■■□□□ 1.86
USP6NL-204ENST00000606752 RHPN1Q8TCX5 695 aa26.67■■□□□ 1.86
USP6NL-204ENST00000606752 ZNF831Q5JPB2 1677 aa26.66■■□□□ 1.86
USP6NL-204ENST00000606752 NHSQ6T4R5 1651 aa26.66■■□□□ 1.86
USP6NL-204ENST00000606752 OSBPL3Q9H4L5 887 aa26.65■■□□□ 1.86
USP6NL-204ENST00000606752 LINC00116Q8NCU8 138 aa26.64■■□□□ 1.85
USP6NL-204ENST00000606752 PA2G4Q9UQ80 394 aaKnown RBP26.64■■□□□ 1.85
USP6NL-204ENST00000606752 FOXO4P98177 505 aa26.63■■□□□ 1.85
USP6NL-204ENST00000606752 OS9Q13438 667 aaPredicted RBP26.63■■□□□ 1.85
USP6NL-204ENST00000606752 TTC22Q5TAA0 569 aa26.63■■□□□ 1.85
USP6NL-204ENST00000606752 ERC1Q8IUD2 1116 aa26.63■■□□□ 1.85
USP6NL-204ENST00000606752 RREB1Q92766 1687 aa26.63■■□□□ 1.85
USP6NL-204ENST00000606752 PCCAP05165 728 aaPredicted RBP26.62■■□□□ 1.85
USP6NL-204ENST00000606752 RBM6P78332 1123 aaKnown RBP26.62■■□□□ 1.85
USP6NL-204ENST00000606752 RTL5Q5HYW3 569 aaPredicted RBP26.62■■□□□ 1.85
USP6NL-204ENST00000606752 KRT27Q7Z3Y8 459 aa26.62■■□□□ 1.85
USP6NL-204ENST00000606752 BCL11BQ9C0K0 894 aaPredicted RBP26.62■■□□□ 1.85
USP6NL-204ENST00000606752 SALL3Q9BXA9 1300 aa26.62■■□□□ 1.85
USP6NL-204ENST00000606752 PDE1AP54750 535 aa26.62■■□□□ 1.85
USP6NL-204ENST00000606752 FAM196AQ6ZSG2 479 aa26.62■■□□□ 1.85
USP6NL-204ENST00000606752 NLRP10Q86W26 655 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms