RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 HSP90AB4PQ58FF6 505 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 CAVIN1Q6NZI2 390 aaKnown RBP14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 FAM43AQ8N2R8 423 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 LINS1Q8NG48 757 aa14.32□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 PHKG2P15735 406 aa14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 COPS6Q7L5N1 327 aa14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 CPA1P15085 419 aa14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 TATP17735 454 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 AACSQ86V21 672 aa14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 XAGE3Q8WTP9 111 aa14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 CCDC8Q9H0W5 538 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 TRPM3Q9HCF6 1732 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 IFIT2P09913 472 aaKnown RBP14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 PTMSP20962 102 aa14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 LSG1Q9H089 658 aaKnown RBP14.31□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 CYP27B1O15528 508 aa14.3□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 KDM6AO15550 1401 aaPredicted RBP14.3□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 SASH1O94885 1247 aa14.3□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 GLRX3O76003 335 aaKnown RBP14.3□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 RBM27Q9P2N5 1060 aaKnown RBP14.3□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 SNX14Q9Y5W7 946 aa14.3□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 RAD50Q92878 1312 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 MCM2P49736 904 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 CUL4AQ13619 759 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 EPHA10Q5JZY3 1008 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 GPT2Q8TD30 523 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 DDX54Q8TDD1 881 aaKnown RBP14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 ECHDC1Q9NTX5 307 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 NSFL1CQ9UNZ2 370 aaKnown RBP14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 MEGF6O75095 1541 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 PTH1RQ03431 593 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 MYD88Q99836 296 aa14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.29□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 HSPA2P54652 639 aa14.28□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 DIAPH3Q9NSV4 1193 aa14.28□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 IFNL2Q8IZJ0 200 aa14.28□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 G3BP1Q13283 466 aaKnown RBP eCLIP14.28□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 MST1RQ04912 1400 aa14.27□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 OVOS2A0A0G2JMS6 1433 aa14.27□□□□□ -0.12
HMGN3-AS1-201ENST00000604516 BRD1O95696 1058 aa14.27□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ZSCAN23Q3MJ62 389 aa14.27□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 LARP1Q6PKG0 1096 aaKnown RBP14.27□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 USP42Q9H9J4 1324 aaKnown RBP14.27□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ATP5J2-PTCD1G3V325 749 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 PTCD1O75127 700 aaKnown RBP14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 GCKRQ14397 625 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 TTC5Q8N0Z6 440 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 GDPD2Q9HCC8 539 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 AK2P54819 239 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 NEXNQ0ZGT2 675 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ADCK5Q3MIX3 580 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ANKRD13DQ6ZTN6 518 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 FAM227BQ96M60 508 aa14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ISY1Q9ULR0 285 aaKnown RBP14.26□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ERC1Q8IUD2 1116 aa14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 CASTP20810 708 aaKnown RBP14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 IL17RAQ96F46 866 aa14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 INTS4Q96HW7 963 aaKnown RBP14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 UTYO14607 1347 aa14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 COL9A3Q14050 684 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 TPRNQ4KMQ1 711 aa14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 RUFY3Q7L099 469 aa14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 LRP10Q7Z4F1 713 aa14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 EDC3Q96F86 508 aaKnown RBP14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 GPATCH3Q96I76 525 aa14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 SIPA1L3O60292 1781 aaPredicted RBP14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 DCAF5Q96JK2 942 aa14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 TTC14Q96N46 770 aa14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 HDAC5Q9UQL6 1122 aa14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 CABP4P57796 275 aa14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 UBE3BQ7Z3V4 1068 aa14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 TMEM63CQ9P1W3 806 aa14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 NDUFB9Q9Y6M9 179 aa14.24□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ALS2Q96Q42 1657 aa14.23□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 NASPP49321 788 aaPredicted RBP14.23□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 LARGE1O95461 756 aa14.23□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 EVI5LQ96CN4 794 aa14.23□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 NMIQ13287 307 aaPredicted RBP14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 EPB41L2O43491 1005 aaKnown RBP14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 FMNL2Q96PY5 1086 aa14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
HMGN3-AS1-201ENST00000604516 C5P01031 1676 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms