RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
CCDC12-211ENST00000604367 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
CCDC12-211ENST00000604367 NBPF14Q5TI25 921 aa18.47■□□□□ 0.55
CCDC12-211ENST00000604367 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
CCDC12-211ENST00000604367 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
CCDC12-211ENST00000604367 ROBO1Q9Y6N7 1651 aa18.47■□□□□ 0.55
CCDC12-211ENST00000604367 REC8O95072 547 aa18.47■□□□□ 0.55
CCDC12-211ENST00000604367 SHANK3Q9BYB0 1731 aa18.46■□□□□ 0.55
CCDC12-211ENST00000604367 A1BGP04217 495 aa18.46■□□□□ 0.55
CCDC12-211ENST00000604367 GLI3P10071 1580 aa18.46■□□□□ 0.55
CCDC12-211ENST00000604367 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
CCDC12-211ENST00000604367 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
CCDC12-211ENST00000604367 EPHA10Q5JZY3 1008 aa18.44■□□□□ 0.54
CCDC12-211ENST00000604367 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
CCDC12-211ENST00000604367 PI4K2BQ8TCG2 481 aa18.44■□□□□ 0.54
CCDC12-211ENST00000604367 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
CCDC12-211ENST00000604367 KLHDC4Q8TBB5 520 aa18.44■□□□□ 0.54
CCDC12-211ENST00000604367 SIL1Q9H173 461 aa18.44■□□□□ 0.54
CCDC12-211ENST00000604367 AOX1Q06278 1338 aa18.44■□□□□ 0.54
CCDC12-211ENST00000604367 CHMLP26374 656 aa18.43■□□□□ 0.54
CCDC12-211ENST00000604367 TTLL7Q6ZT98 887 aa18.43■□□□□ 0.54
CCDC12-211ENST00000604367 UBE3BQ7Z3V4 1068 aa18.43■□□□□ 0.54
CCDC12-211ENST00000604367 PLBD2Q8NHP8 589 aa18.43■□□□□ 0.54
CCDC12-211ENST00000604367 ESYT1Q9BSJ8 1104 aa18.43■□□□□ 0.54
CCDC12-211ENST00000604367 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
CCDC12-211ENST00000604367 KCPQ6ZWJ8 1503 aa18.42■□□□□ 0.54
CCDC12-211ENST00000604367 KAT6BQ8WYB5 2073 aa18.42■□□□□ 0.54
CCDC12-211ENST00000604367 A0A087WZG4 1122 aa18.42■□□□□ 0.54
CCDC12-211ENST00000604367 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
CCDC12-211ENST00000604367 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC12-211ENST00000604367 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
CCDC12-211ENST00000604367 RABEP1Q15276 862 aa18.41■□□□□ 0.54
CCDC12-211ENST00000604367 ERC1Q8IUD2 1116 aa18.41■□□□□ 0.54
CCDC12-211ENST00000604367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
CCDC12-211ENST00000604367 UBR2Q8IWV8 1755 aa18.41■□□□□ 0.54
CCDC12-211ENST00000604367 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
CCDC12-211ENST00000604367 ADAMTS2O95450 1211 aa18.41■□□□□ 0.54
CCDC12-211ENST00000604367 AACSQ86V21 672 aa18.41■□□□□ 0.54
CCDC12-211ENST00000604367 ASAP1Q9ULH1 1129 aa18.41■□□□□ 0.54
CCDC12-211ENST00000604367 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
CCDC12-211ENST00000604367 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
CCDC12-211ENST00000604367 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
CCDC12-211ENST00000604367 SASH1O94885 1247 aa18.4■□□□□ 0.54
CCDC12-211ENST00000604367 IFIT2P09913 472 aaKnown RBP18.4■□□□□ 0.54
CCDC12-211ENST00000604367 PIGBQ92521 554 aa18.4■□□□□ 0.54
CCDC12-211ENST00000604367 ZBTB3Q9H5J0 574 aa18.4■□□□□ 0.54
CCDC12-211ENST00000604367 ANO2Q9NQ90 1003 aa18.4■□□□□ 0.54
CCDC12-211ENST00000604367 TOGARAM1Q9Y4F4 1720 aa18.4■□□□□ 0.54
CCDC12-211ENST00000604367 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
CCDC12-211ENST00000604367 CHMP5Q9NZZ3 219 aa18.4■□□□□ 0.54
CCDC12-211ENST00000604367 IL25Q9H293 177 aa18.39■□□□□ 0.53
CCDC12-211ENST00000604367 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
CCDC12-211ENST00000604367 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
CCDC12-211ENST00000604367 TNS2Q63HR2 1409 aa18.38■□□□□ 0.53
CCDC12-211ENST00000604367 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
CCDC12-211ENST00000604367 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
CCDC12-211ENST00000604367 SYTL4Q96C24 671 aaPredicted RBP18.38■□□□□ 0.53
CCDC12-211ENST00000604367 ECHDC1Q9NTX5 307 aa18.38■□□□□ 0.53
CCDC12-211ENST00000604367 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
CCDC12-211ENST00000604367 GLRX3O76003 335 aaKnown RBP18.37■□□□□ 0.53
CCDC12-211ENST00000604367 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
CCDC12-211ENST00000604367 AHDC1Q5TGY3 1603 aaPredicted RBP18.37■□□□□ 0.53
CCDC12-211ENST00000604367 AK9Q5TCS8 1911 aa18.36■□□□□ 0.53
CCDC12-211ENST00000604367 USP42Q9H9J4 1324 aaKnown RBP18.36■□□□□ 0.53
CCDC12-211ENST00000604367 DNAJC10Q8IXB1 793 aa18.36■□□□□ 0.53
CCDC12-211ENST00000604367 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
CCDC12-211ENST00000604367 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
CCDC12-211ENST00000604367 LTBP4Q8N2S1 1624 aa18.36■□□□□ 0.53
CCDC12-211ENST00000604367 EXOC5O00471 708 aa18.35■□□□□ 0.53
CCDC12-211ENST00000604367 TLR7Q9NYK1 1049 aaKnown RBP18.35■□□□□ 0.53
CCDC12-211ENST00000604367 CHMP3Q9Y3E7 222 aa18.35■□□□□ 0.53
CCDC12-211ENST00000604367 COL16A1Q07092 1604 aaPredicted RBP18.35■□□□□ 0.53
CCDC12-211ENST00000604367 ARXQ96QS3 562 aa18.35■□□□□ 0.53
CCDC12-211ENST00000604367 DISP2A7MBM2 1401 aa18.35■□□□□ 0.53
CCDC12-211ENST00000604367 CASP7P55210 303 aa18.34■□□□□ 0.53
CCDC12-211ENST00000604367 PIP4K2BP78356 416 aa18.34■□□□□ 0.53
CCDC12-211ENST00000604367 CWC25Q9NXE8 425 aaPredicted RBP18.34■□□□□ 0.53
CCDC12-211ENST00000604367 PALD1Q9ULE6 856 aa18.34■□□□□ 0.53
CCDC12-211ENST00000604367 NUTM2BA6NNL0 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC12-211ENST00000604367 NUTM2EB1AL46 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC12-211ENST00000604367 DDIT3P35638 169 aa18.34■□□□□ 0.53
CCDC12-211ENST00000604367 RABL6Q3YEC7 729 aaPredicted RBP18.34■□□□□ 0.53
CCDC12-211ENST00000604367 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
CCDC12-211ENST00000604367 NUTM2AQ8IVF1 878 aaPredicted RBP18.34■□□□□ 0.53
CCDC12-211ENST00000604367 ST18O60284 1047 aa18.33■□□□□ 0.53
CCDC12-211ENST00000604367 MCCP23508 829 aa18.33■□□□□ 0.53
CCDC12-211ENST00000604367 RFX5P48382 616 aaPredicted RBP18.33■□□□□ 0.53
CCDC12-211ENST00000604367 PTPN12Q05209 780 aaKnown RBP18.33■□□□□ 0.53
CCDC12-211ENST00000604367 LMBR1LQ6UX01 489 aa18.33■□□□□ 0.53
CCDC12-211ENST00000604367 COPRSQ9NQ92 184 aa18.33■□□□□ 0.52
CCDC12-211ENST00000604367 COL22A1Q8NFW1 1626 aaPredicted RBP18.32■□□□□ 0.52
CCDC12-211ENST00000604367 H7C1W4 665 aa18.32■□□□□ 0.52
CCDC12-211ENST00000604367 A0A0G2JS52 829 aa18.32■□□□□ 0.52
CCDC12-211ENST00000604367 ITGB4P16144 1822 aa18.31■□□□□ 0.52
CCDC12-211ENST00000604367 SGSM2O43147 1006 aa18.31■□□□□ 0.52
CCDC12-211ENST00000604367 STARD3NLO95772 234 aa18.31■□□□□ 0.52
CCDC12-211ENST00000604367 NEK4P51957 841 aa18.31■□□□□ 0.52
CCDC12-211ENST00000604367 DIAPH3Q9NSV4 1193 aa18.31■□□□□ 0.52
CCDC12-211ENST00000604367 FOXO4P98177 505 aa18.3■□□□□ 0.52
CCDC12-211ENST00000604367 TFCP2Q12800 502 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms