RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CCDC93Q567U6 631 aa16■□□□□ 0.15
PDLIM1P1-201ENST00000604187 MASTLQ96GX5 879 aa16■□□□□ 0.15
PDLIM1P1-201ENST00000604187 HACL1Q9UJ83 578 aa16■□□□□ 0.15
PDLIM1P1-201ENST00000604187 COL11A2P13942 1736 aaPredicted RBP15.99■□□□□ 0.15
PDLIM1P1-201ENST00000604187 RASSF10A6NK89 507 aa15.99■□□□□ 0.15
PDLIM1P1-201ENST00000604187 CAMTA2O94983 1202 aa15.99■□□□□ 0.15
PDLIM1P1-201ENST00000604187 IL6STP40189 918 aaPredicted RBP15.99■□□□□ 0.15
PDLIM1P1-201ENST00000604187 ZNF277Q9NRM2 450 aaPredicted RBP15.99■□□□□ 0.15
PDLIM1P1-201ENST00000604187 SCN11AQ9UI33 1791 aa15.99■□□□□ 0.15
PDLIM1P1-201ENST00000604187 HEG1Q9ULI3 1381 aa15.99■□□□□ 0.15
PDLIM1P1-201ENST00000604187 EPHX2P34913 555 aa15.98■□□□□ 0.15
PDLIM1P1-201ENST00000604187 MAP1SQ66K74 1059 aaPredicted RBP15.98■□□□□ 0.15
PDLIM1P1-201ENST00000604187 NPM2Q86SE8 214 aaKnown RBP15.98■□□□□ 0.15
PDLIM1P1-201ENST00000604187 C7orf43Q8WVR3 580 aa15.98■□□□□ 0.15
PDLIM1P1-201ENST00000604187 KNSTRNQ9Y448 316 aa15.98■□□□□ 0.15
PDLIM1P1-201ENST00000604187 MAP2K1Q02750 393 aaPredicted RBP15.97■□□□□ 0.15
PDLIM1P1-201ENST00000604187 FKBP4Q02790 459 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM1P1-201ENST00000604187 DEFB115Q30KQ5 88 aa15.97■□□□□ 0.15
PDLIM1P1-201ENST00000604187 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
PDLIM1P1-201ENST00000604187 TEX13AQ9BXU3 409 aaPredicted RBP15.97■□□□□ 0.15
PDLIM1P1-201ENST00000604187 ABT1Q9ULW3 272 aaKnown RBP15.97■□□□□ 0.15
PDLIM1P1-201ENST00000604187 SCN7AQ01118 1682 aa15.97■□□□□ 0.15
PDLIM1P1-201ENST00000604187 RNF123Q5XPI4 1314 aa15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 WDR33Q9C0J8 1336 aaKnown RBP15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 A1BGP04217 495 aa15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 TEFQ10587 303 aa15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 PNMA8AQ86V59 439 aaPredicted RBP15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 NBPF5PQ86XG9 351 aaPredicted RBP15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 ANKRD31Q8N7Z5 1873 aa15.96■□□□□ 0.15
PDLIM1P1-201ENST00000604187 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
PDLIM1P1-201ENST00000604187 NPR1P16066 1061 aa15.95■□□□□ 0.14
PDLIM1P1-201ENST00000604187 DZIP3Q86Y13 1208 aaKnown RBP15.95■□□□□ 0.14
PDLIM1P1-201ENST00000604187 TIMELESSQ9UNS1 1208 aa15.95■□□□□ 0.14
PDLIM1P1-201ENST00000604187 FER1L6Q2WGJ9 1857 aa15.95■□□□□ 0.14
PDLIM1P1-201ENST00000604187 EIF4G2P78344 907 aaKnown RBP eCLIP15.94■□□□□ 0.14
PDLIM1P1-201ENST00000604187 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
PDLIM1P1-201ENST00000604187 CCDC85CA6NKD9 419 aa15.93■□□□□ 0.14
PDLIM1P1-201ENST00000604187 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
PDLIM1P1-201ENST00000604187 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
PDLIM1P1-201ENST00000604187 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 MLLT1Q03111 559 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 GRM1Q13255 1194 aa15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 GPC2Q8N158 579 aa15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 UBR2Q8IWV8 1755 aa15.92■□□□□ 0.14
PDLIM1P1-201ENST00000604187 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
PDLIM1P1-201ENST00000604187 FZD9O00144 591 aa15.91■□□□□ 0.14
PDLIM1P1-201ENST00000604187 IARSP41252 1262 aaKnown RBP15.91■□□□□ 0.14
PDLIM1P1-201ENST00000604187 CAPNS2Q96L46 248 aa15.91■□□□□ 0.14
PDLIM1P1-201ENST00000604187 BEGAINQ9BUH8 593 aa15.91■□□□□ 0.14
PDLIM1P1-201ENST00000604187 DDX21Q9NR30 783 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM1P1-201ENST00000604187 SLX4Q8IY92 1834 aa15.91■□□□□ 0.14
PDLIM1P1-201ENST00000604187 KLRG2A4D1S0 409 aaPredicted RBP15.9■□□□□ 0.14
PDLIM1P1-201ENST00000604187 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
PDLIM1P1-201ENST00000604187 ZNF652Q9Y2D9 606 aa15.9■□□□□ 0.14
PDLIM1P1-201ENST00000604187 CCDC88AQ3V6T2 1871 aa15.89■□□□□ 0.13
PDLIM1P1-201ENST00000604187 KCNQ3O43525 872 aa15.89■□□□□ 0.13
PDLIM1P1-201ENST00000604187 FMR1Q06787 632 aaKnown RBP eCLIP15.89■□□□□ 0.13
PDLIM1P1-201ENST00000604187 CLEC4GQ6UXB4 293 aa15.89■□□□□ 0.13
PDLIM1P1-201ENST00000604187 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
PDLIM1P1-201ENST00000604187 GJA3Q9Y6H8 435 aa15.89■□□□□ 0.13
PDLIM1P1-201ENST00000604187 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
PDLIM1P1-201ENST00000604187 DICER1Q9UPY3 1922 aaKnown RBP15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 FAM177BA6PVY3 158 aa15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 ECE1P42892 770 aa15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 CYP4F22Q6NT55 531 aa15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 TPTE2Q6XPS3 522 aa15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 JDP2Q8WYK2 163 aa15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 NIP7Q9Y221 180 aaKnown RBP eCLIP15.88■□□□□ 0.13
PDLIM1P1-201ENST00000604187 SCN4AP35499 1836 aa15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 PRAMEF22A3QJZ6 481 aa15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 LMOD1P29536 600 aaPredicted RBP15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 RGS19P49795 217 aa15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 GPR101Q96P66 508 aaPredicted RBP15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 USP16Q9Y5T5 823 aa15.87■□□□□ 0.13
PDLIM1P1-201ENST00000604187 TRAF5O00463 557 aa15.86■□□□□ 0.13
PDLIM1P1-201ENST00000604187 PSMD1Q99460 953 aa15.86■□□□□ 0.13
PDLIM1P1-201ENST00000604187 CEMIPQ8WUJ3 1361 aa15.86■□□□□ 0.13
PDLIM1P1-201ENST00000604187 ALDH1B1P30837 517 aa15.85■□□□□ 0.13
PDLIM1P1-201ENST00000604187 EPS15P42566 896 aa15.85■□□□□ 0.13
PDLIM1P1-201ENST00000604187 EIF6P56537 245 aaKnown RBP15.85■□□□□ 0.13
PDLIM1P1-201ENST00000604187 CFAP44Q96MT7 982 aa15.85■□□□□ 0.13
PDLIM1P1-201ENST00000604187 SNED1Q8TER0 1413 aa15.85■□□□□ 0.13
PDLIM1P1-201ENST00000604187 GTF2E1P29083 439 aaPredicted RBP15.84■□□□□ 0.13
PDLIM1P1-201ENST00000604187 SCNN1DP51172 638 aa15.84■□□□□ 0.13
PDLIM1P1-201ENST00000604187 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
PDLIM1P1-201ENST00000604187 CST9Q5W186 159 aa15.84■□□□□ 0.13
PDLIM1P1-201ENST00000604187 PCDH10Q9P2E7 1040 aa15.84■□□□□ 0.13
PDLIM1P1-201ENST00000604187 THSD7BQ9C0I4 1608 aa15.83■□□□□ 0.13
PDLIM1P1-201ENST00000604187 ARFGEF2Q9Y6D5 1785 aa15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 AOC2O75106 756 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms