RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	SLC39A6	Q13433	755 aa		18.92	■□□□□ 0.62
CELF4-223	ENST00000603232	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.92	■□□□□ 0.62
CELF4-223	ENST00000603232	USP26	Q9BXU7	913 aa		18.92	■□□□□ 0.62
CELF4-223	ENST00000603232	KCNQ3	O43525	872 aa		18.91	■□□□□ 0.62
CELF4-223	ENST00000603232	HSP90AA1	P07900	732 aa	Known RBP	18.91	■□□□□ 0.62
CELF4-223	ENST00000603232	TUBGCP6	Q96RT7	1819 aa		18.91	■□□□□ 0.62
CELF4-223	ENST00000603232	OSBPL3	Q9H4L5	887 aa		18.9	■□□□□ 0.62
CELF4-223	ENST00000603232	ASAP1	Q9ULH1	1129 aa		18.9	■□□□□ 0.62
CELF4-223	ENST00000603232	GOLGA6L22	H0YM25	854 aa		18.89	■□□□□ 0.61
CELF4-223	ENST00000603232	TAF7	Q15545	349 aa	Predicted RBP	18.89	■□□□□ 0.61
CELF4-223	ENST00000603232	GAS2L3	Q86XJ1	694 aa		18.89	■□□□□ 0.61
CELF4-223	ENST00000603232	UBR2	Q8IWV8	1755 aa		18.89	■□□□□ 0.61
CELF4-223	ENST00000603232	BTBD11	A6QL63	1104 aa		18.88	■□□□□ 0.61
CELF4-223	ENST00000603232	NUCB2	P80303	420 aa		18.88	■□□□□ 0.61
CELF4-223	ENST00000603232	CASC1	Q6TDU7	716 aa		18.88	■□□□□ 0.61
CELF4-223	ENST00000603232	ARX	Q96QS3	562 aa		18.88	■□□□□ 0.61
CELF4-223	ENST00000603232	RBM42	Q9BTD8	480 aa	Known RBP	18.88	■□□□□ 0.61
CELF4-223	ENST00000603232	CWC22	Q9HCG8	908 aa	Known RBP	18.88	■□□□□ 0.61
CELF4-223	ENST00000603232	HMMR	O75330	724 aa		18.87	■□□□□ 0.61
CELF4-223	ENST00000603232	CYP2E1	P05181	493 aa	Predicted RBP	18.87	■□□□□ 0.61
CELF4-223	ENST00000603232	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.87	■□□□□ 0.61
CELF4-223	ENST00000603232	TSPYL4	Q9UJ04	414 aa		18.87	■□□□□ 0.61
CELF4-223	ENST00000603232	KLHL40	Q2TBA0	621 aa		18.86	■□□□□ 0.61
CELF4-223	ENST00000603232	ATG3	Q9NT62	314 aa		18.86	■□□□□ 0.61
CELF4-223	ENST00000603232	SDS	P20132	328 aa		18.86	■□□□□ 0.61
CELF4-223	ENST00000603232	KCP	Q6ZWJ8	1503 aa		18.86	■□□□□ 0.61
CELF4-223	ENST00000603232	ERBB4	Q15303	1308 aa		18.85	■□□□□ 0.61
CELF4-223	ENST00000603232	REC8	O95072	547 aa		18.85	■□□□□ 0.61
CELF4-223	ENST00000603232	CCT4	P50991	539 aa	Known RBP	18.85	■□□□□ 0.61
CELF4-223	ENST00000603232	KRT24	Q2M2I5	525 aa		18.85	■□□□□ 0.61
CELF4-223	ENST00000603232	SOS1	Q07889	1333 aa	Predicted RBP	18.85	■□□□□ 0.61
CELF4-223	ENST00000603232	C5	P01031	1676 aa		18.85	■□□□□ 0.61
CELF4-223	ENST00000603232	BAG4	O95429	457 aa	Known RBP	18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	LY75	O60449	1722 aa		18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	ESPN	B1AK53	854 aa		18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	PTCD1	O75127	700 aa	Known RBP	18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	SSFA2	P28290	1259 aa		18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	ZNF790	Q6PG37	636 aa		18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	MEIS3	Q99687	375 aa		18.84	■□□□□ 0.61
CELF4-223	ENST00000603232	PALLD	Q8WX93	1383 aa		18.83	■□□□□ 0.6
CELF4-223	ENST00000603232	KCNQ4	P56696	695 aa		18.83	■□□□□ 0.6
CELF4-223	ENST00000603232	AK9	Q5TCS8	1911 aa		18.82	■□□□□ 0.6
CELF4-223	ENST00000603232	ST18	O60284	1047 aa		18.82	■□□□□ 0.6
CELF4-223	ENST00000603232	APBA3	O96018	575 aa		18.82	■□□□□ 0.6
CELF4-223	ENST00000603232	SLC4A2	P04920	1241 aa		18.82	■□□□□ 0.6
CELF4-223	ENST00000603232	ZNF496	Q96IT1	587 aa	Predicted RBP	18.82	■□□□□ 0.6
CELF4-223	ENST00000603232	TJP1	Q07157	1748 aa		18.81	■□□□□ 0.6
CELF4-223	ENST00000603232	PRAMEF22	A3QJZ6	481 aa		18.81	■□□□□ 0.6
CELF4-223	ENST00000603232	TTC5	Q8N0Z6	440 aa		18.81	■□□□□ 0.6
CELF4-223	ENST00000603232	SLC4A9	Q96Q91	983 aa		18.81	■□□□□ 0.6
CELF4-223	ENST00000603232	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.8	■□□□□ 0.6
CELF4-223	ENST00000603232	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.8	■□□□□ 0.6
CELF4-223	ENST00000603232	ERC2	O15083	957 aa		18.8	■□□□□ 0.6
CELF4-223	ENST00000603232	EIF4A1	P60842	406 aa	Known RBP	18.8	■□□□□ 0.6
CELF4-223	ENST00000603232	PXDNL	A1KZ92	1463 aa		18.8	■□□□□ 0.6
CELF4-223	ENST00000603232	SALL3	Q9BXA9	1300 aa		18.8	■□□□□ 0.6
CELF4-223	ENST00000603232	ZNF445	P59923	1031 aa		18.79	■□□□□ 0.6
CELF4-223	ENST00000603232	IL17RA	Q96F46	866 aa		18.79	■□□□□ 0.6
CELF4-223	ENST00000603232	PPP1R9B	Q96SB3	815 aa		18.79	■□□□□ 0.6
CELF4-223	ENST00000603232	BABAM1	Q9NWV8	329 aa		18.79	■□□□□ 0.6
CELF4-223	ENST00000603232	DEFB132	Q7Z7B7	95 aa		18.78	■□□□□ 0.6
CELF4-223	ENST00000603232	TAF1L	Q8IZX4	1826 aa		18.78	■□□□□ 0.6
CELF4-223	ENST00000603232	PDE1A	P54750	535 aa		18.78	■□□□□ 0.6
CELF4-223	ENST00000603232	FOXD4L1	Q9NU39	408 aa		18.78	■□□□□ 0.6
CELF4-223	ENST00000603232	EPB41L2	O43491	1005 aa	Known RBP	18.77	■□□□□ 0.6
CELF4-223	ENST00000603232	LAMB4	A4D0S4	1761 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	LOC102724428	A0A0B4J2F2	783 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	GNAI2	P04899	355 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	MCM2	P49736	904 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	SIK1	P57059	783 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	EN1	Q05925	392 aa	Predicted RBP	18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	CCDC173	Q0VFZ6	552 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	SMARCC1	Q92922	1105 aa	Predicted RBP	18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	FMNL2	Q96PY5	1086 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	DDX49	Q9Y6V7	483 aa	Known RBP	18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	RGPD4	Q7Z3J3	1758 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	SMARCA5	O60264	1052 aa	Predicted RBP	18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	GNAI3	P08754	354 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	HEG1	Q9ULI3	1381 aa		18.76	■□□□□ 0.59
CELF4-223	ENST00000603232	COL5A3	P25940	1745 aa	Predicted RBP	18.75	■□□□□ 0.59
CELF4-223	ENST00000603232	ITPK1	Q13572	414 aa		18.75	■□□□□ 0.59
CELF4-223	ENST00000603232	PROM2	Q8N271	834 aa		18.75	■□□□□ 0.59
CELF4-223	ENST00000603232	LMBRD1	Q9NUN5	540 aa		18.75	■□□□□ 0.59
CELF4-223	ENST00000603232	EZH2	Q15910	746 aa	Known RBP	18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	DNAJC10	Q8IXB1	793 aa		18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	LRRC4B	Q9NT99	713 aa		18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	ATP6V1A	P38606	617 aa		18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	ANAPC15	P60006	121 aa		18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	SF3B2	Q13435	895 aa	Known RBP	18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	G2E3	Q7L622	706 aa		18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	TRIM44	Q96DX7	344 aa	Predicted RBP	18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	STK31	Q9BXU1	1019 aa		18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	CCNL1	Q9UK58	526 aa	Predicted RBP	18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	MYH14	Q7Z406	1995 aa	Known RBP	18.74	■□□□□ 0.59
CELF4-223	ENST00000603232	AOX1	Q06278	1338 aa		18.73	■□□□□ 0.59
CELF4-223	ENST00000603232	RRP9	O43818	475 aa	Known RBP	18.73	■□□□□ 0.59
CELF4-223	ENST00000603232	GIGYF1	O75420	1035 aa	Predicted RBP	18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms