RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 XRCC6P12956 609 aaKnown RBP eCLIP9.21□□□□□ -0.94
HCG18-244ENST00000602516 BIRC2Q13490 618 aa9.21□□□□□ -0.94
HCG18-244ENST00000602516 DZIP1LQ8IYY4 767 aaKnown RBP9.21□□□□□ -0.94
HCG18-244ENST00000602516 USP6P35125 1406 aa9.21□□□□□ -0.94
HCG18-244ENST00000602516 ZNF142P52746 1687 aaPredicted RBP9.21□□□□□ -0.94
HCG18-244ENST00000602516 TTC21BQ7Z4L5 1316 aa9.2□□□□□ -0.94
HCG18-244ENST00000602516 XRN1Q8IZH2 1706 aaKnown RBP9.2□□□□□ -0.94
HCG18-244ENST00000602516 HSPA2P54652 639 aa9.2□□□□□ -0.94
HCG18-244ENST00000602516 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
HCG18-244ENST00000602516 MED4Q9NPJ6 270 aa9.2□□□□□ -0.94
HCG18-244ENST00000602516 ACEP12821 1306 aa9.2□□□□□ -0.94
HCG18-244ENST00000602516 PPP1R12AO14974 1030 aaPredicted RBP9.2□□□□□ -0.94
HCG18-244ENST00000602516 RGPD1P0DJD0 1748 aa9.2□□□□□ -0.94
HCG18-244ENST00000602516 NEXNQ0ZGT2 675 aa9.2□□□□□ -0.94
HCG18-244ENST00000602516 CEP170BQ9Y4F5 1589 aaPredicted RBP9.2□□□□□ -0.94
HCG18-244ENST00000602516 CTAGE5O15320 804 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 TRIM27P14373 513 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 CD151P48509 253 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 MAF1Q9H063 256 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 USP31Q70CQ4 1352 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 KIF4AO95239 1232 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 HMOX1P09601 288 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 RRS1Q15050 365 aaKnown RBP9.19□□□□□ -0.94
HCG18-244ENST00000602516 LONRF3Q496Y0 759 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
HCG18-244ENST00000602516 HDGFL1Q5TGJ6 251 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 ATF7IPQ6VMQ6 1270 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 SLC26A8Q96RN1 970 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 PHF8Q9UPP1 1060 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 PEAK1Q9H792 1746 aa9.19□□□□□ -0.94
HCG18-244ENST00000602516 RGPD8O14715 1765 aaPredicted RBP9.19□□□□□ -0.94
HCG18-244ENST00000602516 NAT1P18440 290 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 PAX3P23760 479 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 CACTIN-AS1Q8N1I8 211 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 THEMISQ8N1K5 641 aaPredicted RBP9.18□□□□□ -0.94
HCG18-244ENST00000602516 ACRBPQ8NEB7 543 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 AMOTL2Q9Y2J4 779 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 IPO7O95373 1038 aaKnown RBP9.18□□□□□ -0.94
HCG18-244ENST00000602516 CBX1P83916 185 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 JMYQ8N9B5 988 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 IFT57Q9NWB7 429 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 CEP126Q9P2H0 1117 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 PNMA2Q9UL42 364 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 NOB1Q9ULX3 412 aaKnown RBP9.18□□□□□ -0.94
HCG18-244ENST00000602516 FAM163BP0C2L3 166 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 MICALL1Q8N3F8 863 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 ZCRB1Q8TBF4 217 aaKnown RBP9.18□□□□□ -0.94
HCG18-244ENST00000602516 RWDD1Q9H446 243 aaPredicted RBP9.18□□□□□ -0.94
HCG18-244ENST00000602516 KIF3AQ9Y496 699 aa9.18□□□□□ -0.94
HCG18-244ENST00000602516 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
HCG18-244ENST00000602516 ANKRD13AQ8IZ07 590 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 RANBP17Q9H2T7 1088 aaKnown RBP9.17□□□□□ -0.94
HCG18-244ENST00000602516 DDX19BQ9UMR2 479 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 FMN2Q9NZ56 1722 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 CCDC66A2RUB6 948 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 PEX14O75381 377 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 SKILP12757 684 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 GUCY2CP25092 1073 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 GNAI1P63096 354 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 LRCH2Q5VUJ6 765 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 ARPC5LQ9BPX5 153 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 BRMS1Q9HCU9 246 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
HCG18-244ENST00000602516 VAMP4O75379 141 aa9.16□□□□□ -0.94
HCG18-244ENST00000602516 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.16□□□□□ -0.94
HCG18-244ENST00000602516 NOL10Q9BSC4 688 aaKnown RBP9.16□□□□□ -0.94
HCG18-244ENST00000602516 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
HCG18-244ENST00000602516 PIK3R4Q99570 1358 aa9.16□□□□□ -0.94
HCG18-244ENST00000602516 FRAT2O75474 233 aaPredicted RBP9.16□□□□□ -0.94
HCG18-244ENST00000602516 EIF4A2Q14240 407 aaKnown RBP9.16□□□□□ -0.94
HCG18-244ENST00000602516 SUFUQ9UMX1 484 aa9.16□□□□□ -0.94
HCG18-244ENST00000602516 KIF3CO14782 793 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 MFSD4BQ5TF39 518 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 MNS1Q8NEH6 495 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 TNPO1Q92973 898 aaKnown RBP9.15□□□□□ -0.94
HCG18-244ENST00000602516 ANKARQ7Z5J8 1434 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 FSD2A1L4K1 749 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 ICE2Q659A1 982 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 ARHGAP45Q92619 1136 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 SPATA32Q96LK8 384 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 THUMPD2Q9BTF0 503 aaKnown RBP9.15□□□□□ -0.94
HCG18-244ENST00000602516 ZBTB40Q9NUA8 1239 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 PIK3C2AO00443 1686 aa9.15□□□□□ -0.94
HCG18-244ENST00000602516 MARF1Q9Y4F3 1742 aaKnown RBP9.15□□□□□ -0.95
HCG18-244ENST00000602516 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.95
HCG18-244ENST00000602516 EXOC5O00471 708 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 INHBEP58166 350 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 CTR9Q6PD62 1173 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 TMEM57Q8N5G2 664 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 MBIPQ9NS73 344 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 ANKRD33BA6NCL7 494 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 TNNT1P13805 278 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 ZNF771Q7L3S4 317 aaPredicted RBP9.14□□□□□ -0.95
HCG18-244ENST00000602516 MRPL50Q8N5N7 158 aaKnown RBP9.14□□□□□ -0.95
HCG18-244ENST00000602516 NUCKS1Q9H1E3 243 aaKnown RBP9.14□□□□□ -0.95
HCG18-244ENST00000602516 SUDS3Q9H7L9 328 aaPredicted RBP9.14□□□□□ -0.95
HCG18-244ENST00000602516 STRCQ7RTU9 1775 aa9.14□□□□□ -0.95
HCG18-244ENST00000602516 CHD2O14647 1828 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms