RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 GLI3P10071 1580 aa18.8■□□□□ 0.6
HIF3A-218ENST00000600383 ITGB4P16144 1822 aa18.8■□□□□ 0.6
HIF3A-218ENST00000600383 STARD3NLO95772 234 aa18.8■□□□□ 0.6
HIF3A-218ENST00000600383 GCKRQ14397 625 aa18.8■□□□□ 0.6
HIF3A-218ENST00000600383 LRRCC1Q9C099 1032 aa18.8■□□□□ 0.6
HIF3A-218ENST00000600383 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
HIF3A-218ENST00000600383 BCL9LQ86UU0 1499 aa18.8■□□□□ 0.6
HIF3A-218ENST00000600383 SPATA31A6Q5VVP1 1343 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 VPS72Q15906 364 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 VSIG10Q8N0Z9 540 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 ZBTB3Q9H5J0 574 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 NWD2Q9ULI1 1742 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 PAPPAQ13219 1627 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 MSH5O43196 834 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 BMP2KLQ5H9B9 411 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 FNBP4Q8N3X1 1017 aaPredicted RBP18.79■□□□□ 0.6
HIF3A-218ENST00000600383 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
HIF3A-218ENST00000600383 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
HIF3A-218ENST00000600383 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
HIF3A-218ENST00000600383 LAMB4A4D0S4 1761 aa18.78■□□□□ 0.6
HIF3A-218ENST00000600383 POLA2Q14181 598 aa18.77■□□□□ 0.6
HIF3A-218ENST00000600383 WNK3Q9BYP7 1800 aa18.77■□□□□ 0.6
HIF3A-218ENST00000600383 BICC1Q9H694 974 aaKnown RBP18.77■□□□□ 0.6
HIF3A-218ENST00000600383 UPF2Q9HAU5 1272 aaKnown RBP18.76■□□□□ 0.59
HIF3A-218ENST00000600383 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
HIF3A-218ENST00000600383 UTYO14607 1347 aa18.76■□□□□ 0.59
HIF3A-218ENST00000600383 A0A087WZG4 1122 aa18.76■□□□□ 0.59
HIF3A-218ENST00000600383 UBE3BQ7Z3V4 1068 aa18.76■□□□□ 0.59
HIF3A-218ENST00000600383 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
HIF3A-218ENST00000600383 IL1RAPL2Q9NP60 686 aa18.76■□□□□ 0.59
HIF3A-218ENST00000600383 OS9Q13438 667 aaPredicted RBP18.75■□□□□ 0.59
HIF3A-218ENST00000600383 RTL5Q5HYW3 569 aaPredicted RBP18.75■□□□□ 0.59
HIF3A-218ENST00000600383 LRP6O75581 1613 aa18.75■□□□□ 0.59
HIF3A-218ENST00000600383 KCNQ2O43526 872 aa18.74■□□□□ 0.59
HIF3A-218ENST00000600383 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
HIF3A-218ENST00000600383 GSPT1P15170 499 aaKnown RBP18.74■□□□□ 0.59
HIF3A-218ENST00000600383 TTC22Q5TAA0 569 aa18.74■□□□□ 0.59
HIF3A-218ENST00000600383 PA2G4Q9UQ80 394 aaKnown RBP18.74■□□□□ 0.59
HIF3A-218ENST00000600383 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
HIF3A-218ENST00000600383 CYP19A1P11511 503 aaPredicted RBP18.73■□□□□ 0.59
HIF3A-218ENST00000600383 MTX1Q13505 466 aa18.73■□□□□ 0.59
HIF3A-218ENST00000600383 TSHZ3Q63HK5 1081 aa18.73■□□□□ 0.59
HIF3A-218ENST00000600383 DOT1LQ8TEK3 1739 aa18.72■□□□□ 0.59
HIF3A-218ENST00000600383 ATP6V1AP38606 617 aa18.72■□□□□ 0.59
HIF3A-218ENST00000600383 PDE1AP54750 535 aa18.72■□□□□ 0.59
HIF3A-218ENST00000600383 EPHA10Q5JZY3 1008 aa18.72■□□□□ 0.59
HIF3A-218ENST00000600383 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
HIF3A-218ENST00000600383 KIF6Q6ZMV9 814 aa18.71■□□□□ 0.59
HIF3A-218ENST00000600383 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.59
HIF3A-218ENST00000600383 KIF1BPQ96EK5 621 aa18.71■□□□□ 0.59
HIF3A-218ENST00000600383 CWC25Q9NXE8 425 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-218ENST00000600383 ZBTB1Q9Y2K1 713 aa18.71■□□□□ 0.59
HIF3A-218ENST00000600383 ARFGEF2Q9Y6D5 1785 aa18.7■□□□□ 0.58
HIF3A-218ENST00000600383 NUTM1Q86Y26 1132 aa18.7■□□□□ 0.58
HIF3A-218ENST00000600383 MX1P20591 662 aa18.7■□□□□ 0.58
HIF3A-218ENST00000600383 FAM182BQ5T319 152 aa18.7■□□□□ 0.58
HIF3A-218ENST00000600383 TBC1D9Q6ZT07 1266 aa18.69■□□□□ 0.58
HIF3A-218ENST00000600383 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
HIF3A-218ENST00000600383 SIL1Q9H173 461 aa18.69■□□□□ 0.58
HIF3A-218ENST00000600383 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
HIF3A-218ENST00000600383 SDSP20132 328 aa18.68■□□□□ 0.58
HIF3A-218ENST00000600383 SIK1P57059 783 aa18.68■□□□□ 0.58
HIF3A-218ENST00000600383 NOP58Q9Y2X3 529 aaKnown RBP18.68■□□□□ 0.58
HIF3A-218ENST00000600383 AFF2P51816 1311 aa18.68■□□□□ 0.58
HIF3A-218ENST00000600383 AFDNP55196 1824 aaKnown RBP18.68■□□□□ 0.58
HIF3A-218ENST00000600383 CCDC191Q8NCU4 936 aa18.68■□□□□ 0.58
HIF3A-218ENST00000600383 GJD4Q96KN9 370 aaPredicted RBP18.68■□□□□ 0.58
HIF3A-218ENST00000600383 H7C1W4 665 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 CDC45O75419 566 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 G3BP1Q13283 466 aaKnown RBP eCLIP18.67■□□□□ 0.58
HIF3A-218ENST00000600383 TCIRG1Q13488 830 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 DDRGK1Q96HY6 314 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 CHMP3Q9Y3E7 222 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
HIF3A-218ENST00000600383 HLFQ16534 295 aa18.66■□□□□ 0.58
HIF3A-218ENST00000600383 PALLDQ8WX93 1383 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 CASP7P55210 303 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 C22orf23Q9BZE7 217 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 MAP3K15Q6ZN16 1313 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 SALL3Q9BXA9 1300 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 SLC4A3P48751 1232 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 LMBR1LQ6UX01 489 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
HIF3A-218ENST00000600383 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
HIF3A-218ENST00000600383 GPTP24298 496 aa18.64■□□□□ 0.57
HIF3A-218ENST00000600383 CRKLP46109 303 aaKnown RBP18.64■□□□□ 0.57
HIF3A-218ENST00000600383 ITPK1Q13572 414 aa18.64■□□□□ 0.57
HIF3A-218ENST00000600383 DZIP3Q86Y13 1208 aaKnown RBP18.64■□□□□ 0.57
HIF3A-218ENST00000600383 ERC1Q8IUD2 1116 aa18.64■□□□□ 0.57
HIF3A-218ENST00000600383 SMARCC1Q92922 1105 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-218ENST00000600383 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
HIF3A-218ENST00000600383 DAXXQ9UER7 740 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-218ENST00000600383 TRIM6-TRIM34B2RNG4 842 aa18.64■□□□□ 0.57
HIF3A-218ENST00000600383 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-218ENST00000600383 KCNQ4P56696 695 aa18.64■□□□□ 0.57
HIF3A-218ENST00000600383 GIGYF2Q6Y7W6 1299 aaKnown RBP18.64■□□□□ 0.57
HIF3A-218ENST00000600383 INTS5Q6P9B9 1019 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms