RNA–Protein interactions for RNA: ENST00000596403.1

SIPA1L3-207, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-207ENST00000596403 CCDC93Q567U6 631 aa19.55■□□□□ 0.72
SIPA1L3-207ENST00000596403 NPR1P16066 1061 aa19.54■□□□□ 0.72
SIPA1L3-207ENST00000596403 TPTE2Q6XPS3 522 aa19.54■□□□□ 0.72
SIPA1L3-207ENST00000596403 LDHDQ86WU2 507 aa19.54■□□□□ 0.72
SIPA1L3-207ENST00000596403 CCDC24Q8N4L8 307 aa19.54■□□□□ 0.72
SIPA1L3-207ENST00000596403 UBR2Q8IWV8 1755 aa19.53■□□□□ 0.72
SIPA1L3-207ENST00000596403 DDNO94850 711 aaPredicted RBP19.53■□□□□ 0.72
SIPA1L3-207ENST00000596403 SNRPA1P09661 255 aaKnown RBP19.53■□□□□ 0.72
SIPA1L3-207ENST00000596403 CEMIPQ8WUJ3 1361 aa19.53■□□□□ 0.72
SIPA1L3-207ENST00000596403 TIAM2Q8IVF5 1701 aa19.52■□□□□ 0.72
SIPA1L3-207ENST00000596403 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
SIPA1L3-207ENST00000596403 AIDAQ96BJ3 306 aa19.52■□□□□ 0.72
SIPA1L3-207ENST00000596403 L3MBTL3Q96JM7 780 aaPredicted RBP19.51■□□□□ 0.71
SIPA1L3-207ENST00000596403 MKRN1Q9UHC7 482 aaKnown RBP19.51■□□□□ 0.71
SIPA1L3-207ENST00000596403 GTF2E1P29083 439 aaPredicted RBP19.5■□□□□ 0.71
SIPA1L3-207ENST00000596403 ALDH1B1P30837 517 aa19.5■□□□□ 0.71
SIPA1L3-207ENST00000596403 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
SIPA1L3-207ENST00000596403 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
SIPA1L3-207ENST00000596403 FKBP4Q02790 459 aaKnown RBP eCLIP19.49■□□□□ 0.71
SIPA1L3-207ENST00000596403 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
SIPA1L3-207ENST00000596403 PNMA8AQ86V59 439 aaPredicted RBP19.49■□□□□ 0.71
SIPA1L3-207ENST00000596403 HACL1Q9UJ83 578 aa19.49■□□□□ 0.71
SIPA1L3-207ENST00000596403 TAF1DQ9H5J8 278 aaPredicted RBP19.48■□□□□ 0.71
SIPA1L3-207ENST00000596403 NIP7Q9Y221 180 aaKnown RBP eCLIP19.48■□□□□ 0.71
SIPA1L3-207ENST00000596403 USP16Q9Y5T5 823 aa19.48■□□□□ 0.71
SIPA1L3-207ENST00000596403 TMEM88BA6NKF7 163 aa19.47■□□□□ 0.71
SIPA1L3-207ENST00000596403 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
SIPA1L3-207ENST00000596403 NEFMP07197 916 aa19.47■□□□□ 0.71
SIPA1L3-207ENST00000596403 CLEC11AQ9Y240 323 aa19.47■□□□□ 0.71
SIPA1L3-207ENST00000596403 COL3A1P02461 1466 aaPredicted RBP19.47■□□□□ 0.71
SIPA1L3-207ENST00000596403 CNTNAP1P78357 1384 aa19.46■□□□□ 0.71
SIPA1L3-207ENST00000596403 KLRG2A4D1S0 409 aaPredicted RBP19.46■□□□□ 0.71
SIPA1L3-207ENST00000596403 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
SIPA1L3-207ENST00000596403 C7orf43Q8WVR3 580 aa19.46■□□□□ 0.71
SIPA1L3-207ENST00000596403 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
SIPA1L3-207ENST00000596403 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
SIPA1L3-207ENST00000596403 KCNQ3O43525 872 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 CTCFP49711 727 aaPredicted RBP19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 GRIPAP1Q4V328 841 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 JDP2Q8WYK2 163 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 PASKQ96RG2 1323 aa19.45■□□□□ 0.7
SIPA1L3-207ENST00000596403 POTEIP0CG38 1075 aa19.44■□□□□ 0.7
SIPA1L3-207ENST00000596403 POTEJP0CG39 1038 aa19.44■□□□□ 0.7
SIPA1L3-207ENST00000596403 EPHX2P34913 555 aa19.44■□□□□ 0.7
SIPA1L3-207ENST00000596403 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
SIPA1L3-207ENST00000596403 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
SIPA1L3-207ENST00000596403 ANKRD31Q8N7Z5 1873 aa19.43■□□□□ 0.7
SIPA1L3-207ENST00000596403 ZNF277Q9NRM2 450 aaPredicted RBP19.43■□□□□ 0.7
SIPA1L3-207ENST00000596403 DICER1Q9UPY3 1922 aaKnown RBP19.43■□□□□ 0.7
SIPA1L3-207ENST00000596403 IARSP41252 1262 aaKnown RBP19.42■□□□□ 0.7
SIPA1L3-207ENST00000596403 PIP4K2AP48426 406 aaPredicted RBP19.42■□□□□ 0.7
SIPA1L3-207ENST00000596403 TAF7Q15545 349 aaPredicted RBP19.42■□□□□ 0.7
SIPA1L3-207ENST00000596403 GPC2Q8N158 579 aa19.42■□□□□ 0.7
SIPA1L3-207ENST00000596403 PNISRQ8TF01 805 aaKnown RBP19.42■□□□□ 0.7
SIPA1L3-207ENST00000596403 EIF6P56537 245 aaKnown RBP19.41■□□□□ 0.7
SIPA1L3-207ENST00000596403 MCM10Q7L590 875 aa19.41■□□□□ 0.7
SIPA1L3-207ENST00000596403 TMX4Q9H1E5 349 aaPredicted RBP19.41■□□□□ 0.7
SIPA1L3-207ENST00000596403 COL11A2P13942 1736 aaPredicted RBP19.41■□□□□ 0.7
SIPA1L3-207ENST00000596403 FAM177BA6PVY3 158 aa19.4■□□□□ 0.7
SIPA1L3-207ENST00000596403 FOXN1O15353 648 aa19.4■□□□□ 0.7
SIPA1L3-207ENST00000596403 LMOD1P29536 600 aaPredicted RBP19.4■□□□□ 0.7
SIPA1L3-207ENST00000596403 SYNE4Q8N205 404 aa19.4■□□□□ 0.7
SIPA1L3-207ENST00000596403 PSMD1Q99460 953 aa19.4■□□□□ 0.7
SIPA1L3-207ENST00000596403 SLX4Q8IY92 1834 aa19.39■□□□□ 0.7
SIPA1L3-207ENST00000596403 ERVV-1B6SEH8 477 aa19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 FZD9O00144 591 aa19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 ITGBL1O95965 494 aaPredicted RBP19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 VEGFBP49765 207 aa19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 MAP2K1Q02750 393 aaPredicted RBP19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 DEFB115Q30KQ5 88 aa19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 CNTROBQ8N137 903 aa19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 RPGRQ92834 1020 aaKnown RBP19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 ZNF541Q9H0D2 1346 aa19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 SCN4AP35499 1836 aa19.39■□□□□ 0.69
SIPA1L3-207ENST00000596403 PRAMEF22A3QJZ6 481 aa19.38■□□□□ 0.69
SIPA1L3-207ENST00000596403 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
SIPA1L3-207ENST00000596403 KIF6Q6ZMV9 814 aa19.38■□□□□ 0.69
SIPA1L3-207ENST00000596403 NBPF26B4DH59 902 aa19.37■□□□□ 0.69
SIPA1L3-207ENST00000596403 NBPF10Q6P3W6 841 aaKnown RBP19.37■□□□□ 0.69
SIPA1L3-207ENST00000596403 NBPF15Q8N660 670 aa19.37■□□□□ 0.69
SIPA1L3-207ENST00000596403 RNF123Q5XPI4 1314 aa19.36■□□□□ 0.69
SIPA1L3-207ENST00000596403 RASSF10A6NK89 507 aa19.36■□□□□ 0.69
SIPA1L3-207ENST00000596403 CRY2Q49AN0 593 aa19.36■□□□□ 0.69
SIPA1L3-207ENST00000596403 BEGAINQ9BUH8 593 aa19.36■□□□□ 0.69
SIPA1L3-207ENST00000596403 WBP1LQ9NX94 342 aa19.36■□□□□ 0.69
SIPA1L3-207ENST00000596403 ABT1Q9ULW3 272 aaKnown RBP19.36■□□□□ 0.69
SIPA1L3-207ENST00000596403 BCORQ6W2J9 1755 aa19.36■□□□□ 0.69
SIPA1L3-207ENST00000596403 ARFGEF2Q9Y6D5 1785 aa19.35■□□□□ 0.69
SIPA1L3-207ENST00000596403 PPP2R1AP30153 589 aa19.34■□□□□ 0.69
SIPA1L3-207ENST00000596403 ECE1P42892 770 aa19.34■□□□□ 0.69
SIPA1L3-207ENST00000596403 DCTN1Q14203 1278 aa19.34■□□□□ 0.69
SIPA1L3-207ENST00000596403 HLFQ16534 295 aa19.34■□□□□ 0.69
SIPA1L3-207ENST00000596403 MAP1SQ66K74 1059 aaPredicted RBP19.34■□□□□ 0.69
SIPA1L3-207ENST00000596403 LARGE2Q8N3Y3 721 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms