RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 HTATSF1O43719 755 aaKnown RBP17.55■□□□□ 0.4
H3F3B-213ENST00000593254 C21orf2O43822 256 aa17.55■□□□□ 0.4
H3F3B-213ENST00000593254 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
H3F3B-213ENST00000593254 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
H3F3B-213ENST00000593254 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
H3F3B-213ENST00000593254 BRIP1Q9BX63 1249 aa17.55■□□□□ 0.4
H3F3B-213ENST00000593254 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
H3F3B-213ENST00000593254 SCN4AP35499 1836 aa17.54■□□□□ 0.4
H3F3B-213ENST00000593254 SLX4Q8IY92 1834 aa17.54■□□□□ 0.4
H3F3B-213ENST00000593254 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
H3F3B-213ENST00000593254 MCM10Q7L590 875 aa17.54■□□□□ 0.4
H3F3B-213ENST00000593254 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
H3F3B-213ENST00000593254 KCNQ3O43525 872 aa17.53■□□□□ 0.4
H3F3B-213ENST00000593254 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
H3F3B-213ENST00000593254 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
H3F3B-213ENST00000593254 PDE6BP35913 854 aa17.53■□□□□ 0.4
H3F3B-213ENST00000593254 RALBP1Q15311 655 aa17.53■□□□□ 0.4
H3F3B-213ENST00000593254 TBC1D9BQ66K14 1250 aa17.53■□□□□ 0.4
H3F3B-213ENST00000593254 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
H3F3B-213ENST00000593254 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.44e-13■□□□□ 10.8
H3F3B-213ENST00000593254 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
H3F3B-213ENST00000593254 CACNA1SQ13698 1873 aa17.52■□□□□ 0.4
H3F3B-213ENST00000593254 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
H3F3B-213ENST00000593254 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
H3F3B-213ENST00000593254 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
H3F3B-213ENST00000593254 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.4
H3F3B-213ENST00000593254 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.4
H3F3B-213ENST00000593254 A0A087WZG4 1122 aa17.51■□□□□ 0.39
H3F3B-213ENST00000593254 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
H3F3B-213ENST00000593254 NEFMP07197 916 aa17.5■□□□□ 0.39
H3F3B-213ENST00000593254 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
H3F3B-213ENST00000593254 LDHDQ86WU2 507 aa17.5■□□□□ 0.39
H3F3B-213ENST00000593254 L3MBTL3Q96JM7 780 aaPredicted RBP17.5■□□□□ 0.39
H3F3B-213ENST00000593254 KDM3BQ7LBC6 1761 aa17.5■□□□□ 0.39
H3F3B-213ENST00000593254 SLC34A2O95436 690 aa17.49■□□□□ 0.39
H3F3B-213ENST00000593254 IL6STP40189 918 aaPredicted RBP17.49■□□□□ 0.39
H3F3B-213ENST00000593254 VEGFBP49765 207 aa17.49■□□□□ 0.39
H3F3B-213ENST00000593254 CCDC24Q8N4L8 307 aa17.49■□□□□ 0.39
H3F3B-213ENST00000593254 BCORQ6W2J9 1755 aa17.48■□□□□ 0.39
H3F3B-213ENST00000593254 IQCA1LA6NCM1 817 aa17.48■□□□□ 0.39
H3F3B-213ENST00000593254 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
H3F3B-213ENST00000593254 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
H3F3B-213ENST00000593254 A1BGP04217 495 aa17.48■□□□□ 0.39
H3F3B-213ENST00000593254 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
H3F3B-213ENST00000593254 CNKSR1Q969H4 720 aa17.48■□□□□ 0.39
H3F3B-213ENST00000593254 WBP1LQ9NX94 342 aa17.48■□□□□ 0.39
H3F3B-213ENST00000593254 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
H3F3B-213ENST00000593254 SRGNP10124 158 aa17.47■□□□□ 0.39
H3F3B-213ENST00000593254 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
H3F3B-213ENST00000593254 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
H3F3B-213ENST00000593254 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
H3F3B-213ENST00000593254 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
H3F3B-213ENST00000593254 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
H3F3B-213ENST00000593254 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
H3F3B-213ENST00000593254 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
H3F3B-213ENST00000593254 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
H3F3B-213ENST00000593254 MYBBP1AQ9BQG0 1328 aaKnown RBP17.47■□□□□ 0.39
H3F3B-213ENST00000593254 PRAMEF22A3QJZ6 481 aa17.46■□□□□ 0.39
H3F3B-213ENST00000593254 TMEM88BA6NKF7 163 aa17.46■□□□□ 0.39
H3F3B-213ENST00000593254 SNRPA1P09661 255 aaKnown RBP17.46■□□□□ 0.39
H3F3B-213ENST00000593254 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
H3F3B-213ENST00000593254 AIDAQ96BJ3 306 aa17.46■□□□□ 0.39
H3F3B-213ENST00000593254 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.38
H3F3B-213ENST00000593254 CNBD1Q8NA66 436 aa17.45■□□□□ 0.38
H3F3B-213ENST00000593254 MASTLQ96GX5 879 aa17.45■□□□□ 0.38
H3F3B-213ENST00000593254 TBC1D2BQ9UPU7 963 aa17.45■□□□□ 0.38
H3F3B-213ENST00000593254 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
H3F3B-213ENST00000593254 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
H3F3B-213ENST00000593254 LBX1P52954 281 aa17.44■□□□□ 0.38
H3F3B-213ENST00000593254 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
H3F3B-213ENST00000593254 NPM2Q86SE8 214 aaKnown RBP17.43■□□□□ 0.38
H3F3B-213ENST00000593254 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
H3F3B-213ENST00000593254 MIS18AQ9NYP9 233 aa17.43■□□□□ 0.38
H3F3B-213ENST00000593254 RASSF10A6NK89 507 aa17.42■□□□□ 0.38
H3F3B-213ENST00000593254 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
H3F3B-213ENST00000593254 ST5P78524 1137 aa17.42■□□□□ 0.38
H3F3B-213ENST00000593254 HSPA8P11142 646 aaKnown RBP17.41■□□□□ 0.38
H3F3B-213ENST00000593254 DZIP3Q86Y13 1208 aaKnown RBP17.41■□□□□ 0.38
H3F3B-213ENST00000593254 ABHD8Q96I13 439 aa17.41■□□□□ 0.38
H3F3B-213ENST00000593254 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
H3F3B-213ENST00000593254 ZNF541Q9H0D2 1346 aa17.41■□□□□ 0.38
H3F3B-213ENST00000593254 KLRG2A4D1S0 409 aaPredicted RBP17.4■□□□□ 0.38
H3F3B-213ENST00000593254 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
H3F3B-213ENST00000593254 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
H3F3B-213ENST00000593254 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
H3F3B-213ENST00000593254 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
H3F3B-213ENST00000593254 HACL1Q9UJ83 578 aa17.4■□□□□ 0.38
H3F3B-213ENST00000593254 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
H3F3B-213ENST00000593254 EAPPQ56P03 285 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-213ENST00000593254 NPHP1O15259 732 aa17.38■□□□□ 0.37
H3F3B-213ENST00000593254 EPHX2P34913 555 aa17.38■□□□□ 0.37
H3F3B-213ENST00000593254 RIPK4P57078 832 aa17.38■□□□□ 0.37
H3F3B-213ENST00000593254 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
H3F3B-213ENST00000593254 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
H3F3B-213ENST00000593254 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
H3F3B-213ENST00000593254 PNMA8AQ86V59 439 aaPredicted RBP17.38■□□□□ 0.37
H3F3B-213ENST00000593254 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
H3F3B-213ENST00000593254 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
H3F3B-213ENST00000593254 THSD7BQ9C0I4 1608 aa17.38■□□□□ 0.37
H3F3B-213ENST00000593254 FZD9O00144 591 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms