RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 DDNO94850 711 aaPredicted RBP30.46■■■□□ 2.47
LSM7-206ENST00000591515 PRR5LQ6MZQ0 368 aa30.46■■■□□ 2.47
LSM7-206ENST00000591515 CCDC24Q8N4L8 307 aa30.46■■■□□ 2.47
LSM7-206ENST00000591515 PHACTR3Q96KR7 559 aa30.46■■■□□ 2.47
LSM7-206ENST00000591515 BRIP1Q9BX63 1249 aa30.46■■■□□ 2.47
LSM7-206ENST00000591515 PDE6BP35913 854 aa30.45■■■□□ 2.47
LSM7-206ENST00000591515 PDZRN3Q9UPQ7 1066 aa30.45■■■□□ 2.47
LSM7-206ENST00000591515 SIPA1L3O60292 1781 aaPredicted RBP30.45■■■□□ 2.46
LSM7-206ENST00000591515 BCORQ6W2J9 1755 aa30.44■■■□□ 2.46
LSM7-206ENST00000591515 PLEKHF1Q96S99 279 aa30.44■■■□□ 2.46
LSM7-206ENST00000591515 TAOK3Q9H2K8 898 aa30.44■■■□□ 2.46
LSM7-206ENST00000591515 ADAMTS8Q9UP79 889 aa30.44■■■□□ 2.46
LSM7-206ENST00000591515 RTF1Q92541 710 aaKnown RBP30.43■■■□□ 2.46
LSM7-206ENST00000591515 PASKQ96RG2 1323 aa30.43■■■□□ 2.46
LSM7-206ENST00000591515 A0A087WZG4 1122 aa30.42■■■□□ 2.46
LSM7-206ENST00000591515 RUNDC1Q96C34 613 aa30.42■■■□□ 2.46
LSM7-206ENST00000591515 HTATSF1O43719 755 aaKnown RBP30.41■■■□□ 2.46
LSM7-206ENST00000591515 PRDM10Q9NQV6 1147 aa30.41■■■□□ 2.46
LSM7-206ENST00000591515 STARD3NLO95772 234 aa30.4■■■□□ 2.46
LSM7-206ENST00000591515 NFE2L2Q16236 605 aa30.39■■■□□ 2.46
LSM7-206ENST00000591515 CCDC184Q52MB2 194 aa30.39■■■□□ 2.46
LSM7-206ENST00000591515 ADAMTSL1Q8N6G6 1762 aa30.38■■■□□ 2.45
LSM7-206ENST00000591515 CCER2I3L3R5 266 aa30.38■■■□□ 2.45
LSM7-206ENST00000591515 PNISRQ8TF01 805 aaKnown RBP30.38■■■□□ 2.45
LSM7-206ENST00000591515 PRPF40BQ6NWY9 871 aaKnown RBP30.37■■■□□ 2.45
LSM7-206ENST00000591515 TBC1D2BQ9UPU7 963 aa30.37■■■□□ 2.45
LSM7-206ENST00000591515 LMOD3Q0VAK6 560 aa30.36■■■□□ 2.45
LSM7-206ENST00000591515 LDHDQ86WU2 507 aa30.36■■■□□ 2.45
LSM7-206ENST00000591515 TTC5Q8N0Z6 440 aa30.36■■■□□ 2.45
LSM7-206ENST00000591515 CNKSR1Q969H4 720 aa30.36■■■□□ 2.45
LSM7-206ENST00000591515 CTCFP49711 727 aaPredicted RBP30.35■■■□□ 2.45
LSM7-206ENST00000591515 VEGFBP49765 207 aa30.35■■■□□ 2.45
LSM7-206ENST00000591515 TEFQ10587 303 aa30.35■■■□□ 2.45
LSM7-206ENST00000591515 STYK1Q6J9G0 422 aa30.35■■■□□ 2.45
LSM7-206ENST00000591515 ZNF496Q96IT1 587 aaPredicted RBP30.35■■■□□ 2.45
LSM7-206ENST00000591515 L3MBTL3Q96JM7 780 aaPredicted RBP30.35■■■□□ 2.45
LSM7-206ENST00000591515 ZNF330Q9Y3S2 320 aaPredicted RBP30.35■■■□□ 2.45
LSM7-206ENST00000591515 HEG1Q9ULI3 1381 aa30.35■■■□□ 2.45
LSM7-206ENST00000591515 IQCA1LA6NCM1 817 aa30.34■■■□□ 2.45
LSM7-206ENST00000591515 SRGNP10124 158 aa30.34■■■□□ 2.45
LSM7-206ENST00000591515 CCDC146Q8IYE0 955 aa30.34■■■□□ 2.45
LSM7-206ENST00000591515 CNBD1Q8NA66 436 aa30.34■■■□□ 2.45
LSM7-206ENST00000591515 TAF1DQ9H5J8 278 aaPredicted RBP30.34■■■□□ 2.45
LSM7-206ENST00000591515 AIDAQ96BJ3 306 aa30.32■■■□□ 2.44
LSM7-206ENST00000591515 CAMTA2O94983 1202 aa30.31■■■□□ 2.44
LSM7-206ENST00000591515 ITGBL1O95965 494 aaPredicted RBP30.31■■■□□ 2.44
LSM7-206ENST00000591515 IL6STP40189 918 aaPredicted RBP30.31■■■□□ 2.44
LSM7-206ENST00000591515 SOGA3Q5TF21 947 aa30.31■■■□□ 2.44
LSM7-206ENST00000591515 TMEM88BA6NKF7 163 aa30.3■■■□□ 2.44
LSM7-206ENST00000591515 TMPOP42166 694 aaKnown RBP30.3■■■□□ 2.44
LSM7-206ENST00000591515 RIPK4P57078 832 aa30.3■■■□□ 2.44
LSM7-206ENST00000591515 MASTLQ96GX5 879 aa30.3■■■□□ 2.44
LSM7-206ENST00000591515 SETDB2Q96T68 719 aa30.3■■■□□ 2.44
LSM7-206ENST00000591515 WBP1LQ9NX94 342 aa30.3■■■□□ 2.44
LSM7-206ENST00000591515 ST5P78524 1137 aa30.29■■■□□ 2.44
LSM7-206ENST00000591515 ZNF790Q6PG37 636 aa30.29■■■□□ 2.44
LSM7-206ENST00000591515 IL17REQ8NFR9 667 aa30.29■■■□□ 2.44
LSM7-206ENST00000591515 ZNF541Q9H0D2 1346 aa30.28■■■□□ 2.44
LSM7-206ENST00000591515 C7orf43Q8WVR3 580 aa30.28■■■□□ 2.44
LSM7-206ENST00000591515 CEMIPQ8WUJ3 1361 aa30.28■■■□□ 2.44
LSM7-206ENST00000591515 NPHP1O15259 732 aa30.27■■■□□ 2.44
LSM7-206ENST00000591515 A1BGP04217 495 aa30.27■■■□□ 2.44
LSM7-206ENST00000591515 LBX1P52954 281 aa30.27■■■□□ 2.44
LSM7-206ENST00000591515 TEX13AQ9BXU3 409 aaPredicted RBP30.27■■■□□ 2.44
LSM7-206ENST00000591515 SLC34A2O95436 690 aa30.26■■■□□ 2.43
LSM7-206ENST00000591515 EAPPQ56P03 285 aaPredicted RBP30.26■■■□□ 2.43
LSM7-206ENST00000591515 FAM9BQ8IZU0 186 aa30.26■■■□□ 2.43
LSM7-206ENST00000591515 DLG5Q8TDM6 1919 aa30.24■■■□□ 2.43
LSM7-206ENST00000591515 CCDC93Q567U6 631 aa30.24■■■□□ 2.43
LSM7-206ENST00000591515 MCM10Q7L590 875 aa30.24■■■□□ 2.43
LSM7-206ENST00000591515 NEUROD2Q15784 382 aa30.23■■■□□ 2.43
LSM7-206ENST00000591515 APAF1O14727 1248 aa30.22■■■□□ 2.43
LSM7-206ENST00000591515 HSPA8P11142 646 aaKnown RBP30.22■■■□□ 2.43
LSM7-206ENST00000591515 ZNF277Q9NRM2 450 aaPredicted RBP30.22■■■□□ 2.43
LSM7-206ENST00000591515 HACL1Q9UJ83 578 aa30.22■■■□□ 2.43
LSM7-206ENST00000591515 THSD7BQ9C0I4 1608 aa30.22■■■□□ 2.43
LSM7-206ENST00000591515 RASSF10A6NK89 507 aa30.21■■■□□ 2.43
LSM7-206ENST00000591515 FKBP4Q02790 459 aaKnown RBP eCLIP30.21■■■□□ 2.43
LSM7-206ENST00000591515 DZIP3Q86Y13 1208 aaKnown RBP30.21■■■□□ 2.43
LSM7-206ENST00000591515 MIER1Q8N108 512 aa30.21■■■□□ 2.43
LSM7-206ENST00000591515 CLEC11AQ9Y240 323 aa30.21■■■□□ 2.43
LSM7-206ENST00000591515 RRP7AQ9Y3A4 280 aaKnown RBP30.21■■■□□ 2.43
LSM7-206ENST00000591515 EPHX2P34913 555 aa30.2■■■□□ 2.43
LSM7-206ENST00000591515 OLFM4Q6UX06 510 aa30.2■■■□□ 2.43
LSM7-206ENST00000591515 ABHD8Q96I13 439 aa30.2■■■□□ 2.43
LSM7-206ENST00000591515 FMNL2Q96PY5 1086 aa30.2■■■□□ 2.43
LSM7-206ENST00000591515 DCTN1Q14203 1278 aa30.19■■■□□ 2.42
LSM7-206ENST00000591515 NPM2Q86SE8 214 aaKnown RBP30.19■■■□□ 2.42
LSM7-206ENST00000591515 BTBD11A6QL63 1104 aa30.18■■■□□ 2.42
LSM7-206ENST00000591515 CALD1Q05682 793 aaKnown RBP30.18■■■□□ 2.42
LSM7-206ENST00000591515 TAF7Q15545 349 aaPredicted RBP30.18■■■□□ 2.42
LSM7-206ENST00000591515 RNF123Q5XPI4 1314 aa30.18■■■□□ 2.42
LSM7-206ENST00000591515 KCNQ3O43525 872 aa30.17■■■□□ 2.42
LSM7-206ENST00000591515 NPR1P16066 1061 aa30.17■■■□□ 2.42
LSM7-206ENST00000591515 PIP4K2AP48426 406 aaPredicted RBP30.17■■■□□ 2.42
LSM7-206ENST00000591515 DEFB115Q30KQ5 88 aa30.17■■■□□ 2.42
LSM7-206ENST00000591515 NCBP3Q53F19 620 aaKnown RBP30.17■■■□□ 2.42
LSM7-206ENST00000591515 MAP1SQ66K74 1059 aaPredicted RBP30.17■■■□□ 2.42
LSM7-206ENST00000591515 NBPF5PQ86XG9 351 aaPredicted RBP30.17■■■□□ 2.42
LSM7-206ENST00000591515 TRPM7Q96QT4 1865 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms