RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 RAB11FIP3O75154 756 aa23.12■■□□□ 1.29
MBD3-207ENST00000590550 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
MBD3-207ENST00000590550 CWF19L2Q2TBE0 894 aaKnown RBP23.12■■□□□ 1.29
MBD3-207ENST00000590550 CCDC39Q9UFE4 941 aa23.12■■□□□ 1.29
MBD3-207ENST00000590550 SGSM2O43147 1006 aa23.12■■□□□ 1.29
MBD3-207ENST00000590550 BCL11BQ9C0K0 894 aaPredicted RBP23.12■■□□□ 1.29
MBD3-207ENST00000590550 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
MBD3-207ENST00000590550 DDX54Q8TDD1 881 aaKnown RBP23.11■■□□□ 1.29
MBD3-207ENST00000590550 MAP3K2Q9Y2U5 619 aa23.11■■□□□ 1.29
MBD3-207ENST00000590550 GADD45BO75293 160 aaPredicted RBP23.1■■□□□ 1.29
MBD3-207ENST00000590550 SNX14Q9Y5W7 946 aa23.1■■□□□ 1.29
MBD3-207ENST00000590550 IGSF3O75054 1194 aa23.1■■□□□ 1.29
MBD3-207ENST00000590550 ZNF710Q8N1W2 664 aa23.1■■□□□ 1.29
MBD3-207ENST00000590550 ORAI2Q96SN7 254 aa23.1■■□□□ 1.29
MBD3-207ENST00000590550 AOX1Q06278 1338 aa23.1■■□□□ 1.29
MBD3-207ENST00000590550 RGPD2P0DJD1 1756 aa23.1■■□□□ 1.29
MBD3-207ENST00000590550 ATP2B3Q16720 1220 aa23.09■■□□□ 1.29
MBD3-207ENST00000590550 LSG1Q9H089 658 aaKnown RBP23.09■■□□□ 1.29
MBD3-207ENST00000590550 C9orf78Q9NZ63 289 aaPredicted RBP23.09■■□□□ 1.29
MBD3-207ENST00000590550 RAD50Q92878 1312 aa23.09■■□□□ 1.29
MBD3-207ENST00000590550 CNTROBQ8N137 903 aa23.08■■□□□ 1.29
MBD3-207ENST00000590550 INTS4Q96HW7 963 aaKnown RBP23.08■■□□□ 1.29
MBD3-207ENST00000590550 PXDNQ92626 1479 aa23.08■■□□□ 1.29
MBD3-207ENST00000590550 MCM5P33992 734 aa23.08■■□□□ 1.29
MBD3-207ENST00000590550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.08■■□□□ 1.29
MBD3-207ENST00000590550 SPDYE4A6NLX3 237 aa23.07■■□□□ 1.28
MBD3-207ENST00000590550 AIMP1Q12904 312 aaKnown RBP23.07■■□□□ 1.28
MBD3-207ENST00000590550 AKAP4Q5JQC9 854 aa23.07■■□□□ 1.28
MBD3-207ENST00000590550 AK2P54819 239 aa23.07■■□□□ 1.28
MBD3-207ENST00000590550 LRSAM1Q6UWE0 723 aa23.07■■□□□ 1.28
MBD3-207ENST00000590550 MYRIPQ8NFW9 859 aa23.07■■□□□ 1.28
MBD3-207ENST00000590550 KIAA2012Q0VF49 1180 aa23.06■■□□□ 1.28
MBD3-207ENST00000590550 PLEKHO1Q53GL0 409 aaPredicted RBP23.06■■□□□ 1.28
MBD3-207ENST00000590550 NFAT5O94916 1531 aa23.06■■□□□ 1.28
MBD3-207ENST00000590550 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
MBD3-207ENST00000590550 C1orf141Q5JVX7 400 aa23.06■■□□□ 1.28
MBD3-207ENST00000590550 GCP02774 474 aa23.05■■□□□ 1.28
MBD3-207ENST00000590550 DBF4Q9UBU7 674 aaPredicted RBP23.05■■□□□ 1.28
MBD3-207ENST00000590550 PTH1RQ03431 593 aa23.05■■□□□ 1.28
MBD3-207ENST00000590550 GTPBP4Q9BZE4 634 aaKnown RBP23.05■■□□□ 1.28
MBD3-207ENST00000590550 LARGE1O95461 756 aa23.04■■□□□ 1.28
MBD3-207ENST00000590550 RUFY3Q7L099 469 aa23.04■■□□□ 1.28
MBD3-207ENST00000590550 USP48Q86UV5 1035 aa23.04■■□□□ 1.28
MBD3-207ENST00000590550 AXIN2Q9Y2T1 843 aa23.04■■□□□ 1.28
MBD3-207ENST00000590550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.04■■□□□ 1.28
MBD3-207ENST00000590550 GIGYF1O75420 1035 aaPredicted RBP23.04■■□□□ 1.28
MBD3-207ENST00000590550 DIAPH3Q9NSV4 1193 aa23.04■■□□□ 1.28
MBD3-207ENST00000590550 N4BP2Q86UW6 1770 aaPredicted RBP23.04■■□□□ 1.28
MBD3-207ENST00000590550 CASTP20810 708 aaKnown RBP23.03■■□□□ 1.28
MBD3-207ENST00000590550 CLASRPQ8N2M8 674 aaKnown RBP23.03■■□□□ 1.28
MBD3-207ENST00000590550 ZNF830Q96NB3 372 aaPredicted RBP23.03■■□□□ 1.28
MBD3-207ENST00000590550 MBD3O95983 291 aa23.03■■□□□ 1.28
MBD3-207ENST00000590550 HOXB7P09629 217 aa23.03■■□□□ 1.28
MBD3-207ENST00000590550 ADCK5Q3MIX3 580 aa23.03■■□□□ 1.28
MBD3-207ENST00000590550 KCNH5Q8NCM2 988 aa23.02■■□□□ 1.28
MBD3-207ENST00000590550 ANKRD24Q8TF21 1146 aa23.02■■□□□ 1.28
MBD3-207ENST00000590550 TTC14Q96N46 770 aa23.02■■□□□ 1.28
MBD3-207ENST00000590550 RPAP1Q9BWH6 1393 aaPredicted RBP23.02■■□□□ 1.28
MBD3-207ENST00000590550 KIF20AO95235 890 aa23.02■■□□□ 1.28
MBD3-207ENST00000590550 ANKLE2Q86XL3 938 aa23.02■■□□□ 1.28
MBD3-207ENST00000590550 NAP1L2Q9ULW6 460 aaPredicted RBP23.02■■□□□ 1.28
MBD3-207ENST00000590550 TCHHQ07283 1943 aa23.02■■□□□ 1.28
MBD3-207ENST00000590550 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.28
MBD3-207ENST00000590550 PRPF40BQ6NWY9 871 aaKnown RBP23.01■■□□□ 1.27
MBD3-207ENST00000590550 C17orf53Q8N3J3 647 aaPredicted RBP23.01■■□□□ 1.27
MBD3-207ENST00000590550 IL17RAQ96F46 866 aa23.01■■□□□ 1.27
MBD3-207ENST00000590550 SIL1Q9H173 461 aa23.01■■□□□ 1.27
MBD3-207ENST00000590550 CNPY2Q9Y2B0 182 aa23.01■■□□□ 1.27
MBD3-207ENST00000590550 GLRX3O76003 335 aaKnown RBP23.01■■□□□ 1.27
MBD3-207ENST00000590550 SLC39A6Q13433 755 aa23.01■■□□□ 1.27
MBD3-207ENST00000590550 COL9A3Q14050 684 aaPredicted RBP23.01■■□□□ 1.27
MBD3-207ENST00000590550 AACSQ86V21 672 aa23.01■■□□□ 1.27
MBD3-207ENST00000590550 KLHDC4Q8TBB5 520 aa23.01■■□□□ 1.27
MBD3-207ENST00000590550 WDR33Q9C0J8 1336 aaKnown RBP23■■□□□ 1.27
MBD3-207ENST00000590550 IFIT2P09913 472 aaKnown RBP23■■□□□ 1.27
MBD3-207ENST00000590550 VGLL3A8MV65 326 aa23■■□□□ 1.27
MBD3-207ENST00000590550 LETM1O95202 739 aaPredicted RBP23■■□□□ 1.27
MBD3-207ENST00000590550 HSP90AB4PQ58FF6 505 aa23■■□□□ 1.27
MBD3-207ENST00000590550 KSR2Q6VAB6 950 aa23■■□□□ 1.27
MBD3-207ENST00000590550 CCDC8Q9H0W5 538 aaPredicted RBP23■■□□□ 1.27
MBD3-207ENST00000590550 KDM3BQ7LBC6 1761 aa22.99■■□□□ 1.27
MBD3-207ENST00000590550 ARHGEF25Q86VW2 580 aa22.99■■□□□ 1.27
MBD3-207ENST00000590550 SUCLG2Q96I99 432 aa22.99■■□□□ 1.27
MBD3-207ENST00000590550 ECHDC1Q9NTX5 307 aa22.99■■□□□ 1.27
MBD3-207ENST00000590550 KAZALD1Q96I82 304 aa22.99■■□□□ 1.27
MBD3-207ENST00000590550 JAKMIP1Q96N16 626 aaKnown RBP22.99■■□□□ 1.27
MBD3-207ENST00000590550 TLR7Q9NYK1 1049 aaKnown RBP22.99■■□□□ 1.27
MBD3-207ENST00000590550 CCDC83Q8IWF9 413 aa22.98■■□□□ 1.27
MBD3-207ENST00000590550 BICC1Q9H694 974 aaKnown RBP22.98■■□□□ 1.27
MBD3-207ENST00000590550 USP54Q70EL1 1684 aa22.98■■□□□ 1.27
MBD3-207ENST00000590550 SYT1P21579 422 aa22.98■■□□□ 1.27
MBD3-207ENST00000590550 PIP4K2AP48426 406 aaPredicted RBP22.98■■□□□ 1.27
MBD3-207ENST00000590550 FAM227BQ96M60 508 aa22.98■■□□□ 1.27
MBD3-207ENST00000590550 LIMCH1Q9UPQ0 1083 aa22.98■■□□□ 1.27
MBD3-207ENST00000590550 MYL6BP14649 208 aa22.97■■□□□ 1.27
MBD3-207ENST00000590550 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
MBD3-207ENST00000590550 TTC41PQ6P2S7 1318 aa22.97■■□□□ 1.27
MBD3-207ENST00000590550 AMOTQ4VCS5 1084 aa22.96■■□□□ 1.27
MBD3-207ENST00000590550 FIBPO43427 364 aa22.96■■□□□ 1.27
MBD3-207ENST00000590550 SASH1O94885 1247 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms