RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-228ENST00000588781 ATP6V1DQ9Y5K8 247 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
SPIDR-228ENST00000588781 ADCY9O60503 1353 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 UTYO14607 1347 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 AFF2P51816 1311 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 SGSM2O43147 1006 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 TICAM2Q86XR7 235 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 EVI5LQ96CN4 794 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 TMX3Q96JJ7 454 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 ZSCAN31Q96LW9 406 aaPredicted RBP8.65□□□□□ -1.02
SPIDR-228ENST00000588781 ECHDC1Q9NTX5 307 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 MAP3K2Q9Y2U5 619 aa8.65□□□□□ -1.02
SPIDR-228ENST00000588781 ADAMTS7Q9UKP4 1686 aa8.65□□□□□ -1.03
SPIDR-228ENST00000588781 ERBB4Q15303 1308 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 NPHP3Q7Z494 1330 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 GRM8O00222 908 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 ZKSCAN1P17029 563 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-228ENST00000588781 RBM6P78332 1123 aaKnown RBP8.64□□□□□ -1.03
SPIDR-228ENST00000588781 RIC3Q7Z5B4 369 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 NUTM1Q86Y26 1132 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 IFNL2Q8IZJ0 200 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 TTC5Q8N0Z6 440 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 PI4K2BQ8TCG2 481 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 LRRC59Q96AG4 307 aaKnown RBP8.64□□□□□ -1.03
SPIDR-228ENST00000588781 TM6SF1Q9BZW5 370 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 IL1RAPL2Q9NP60 686 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 SH2B1Q9NRF2 756 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-228ENST00000588781 AK9Q5TCS8 1911 aa8.64□□□□□ -1.03
SPIDR-228ENST00000588781 ERBB3P21860 1342 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-228ENST00000588781 BRD1O95696 1058 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 PSMA5P28066 241 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 NASPP49321 788 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-228ENST00000588781 RNF20Q5VTR2 975 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 CADPS2Q86UW7 1296 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 ORAI2Q96SN7 254 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 RTN4Q9NQC3 1192 aaKnown RBP8.63□□□□□ -1.03
SPIDR-228ENST00000588781 LMBRD1Q9NUN5 540 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 LIMCH1Q9UPQ0 1083 aa8.63□□□□□ -1.03
SPIDR-228ENST00000588781 SIPA1L3O60292 1781 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-228ENST00000588781 ALS2Q96Q42 1657 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 COL15A1P39059 1388 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 RFX7Q2KHR2 1363 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 SNRPA1P09661 255 aaKnown RBP8.62□□□□□ -1.03
SPIDR-228ENST00000588781 NBPF7P0C2Y1 421 aaPredicted RBP8.62□□□□□ -1.03
SPIDR-228ENST00000588781 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 ANKRD1Q15327 319 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 HS1BP3Q53T59 392 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 FMNL2Q96PY5 1086 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
SPIDR-228ENST00000588781 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 NLRP2Q9NX02 1062 aa8.62□□□□□ -1.03
SPIDR-228ENST00000588781 CRYBG1Q9Y4K1 1723 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-228ENST00000588781 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-228ENST00000588781 PHKG2P15735 406 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 CLCN1P35523 988 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 TSHZ3Q63HK5 1081 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-228ENST00000588781 CHMP4CQ96CF2 233 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 PPP1R9BQ96SB3 815 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 METTL22Q9BUU2 404 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-228ENST00000588781 LSG1Q9H089 658 aaKnown RBP8.61□□□□□ -1.03
SPIDR-228ENST00000588781 PXDNQ92626 1479 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 LRP5O75197 1615 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 RGPD2P0DJD1 1756 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 CPDO75976 1380 aa8.61□□□□□ -1.03
SPIDR-228ENST00000588781 MRC1P22897 1456 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 KCNQ3O43525 872 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 PRPF40AO75400 957 aaKnown RBP8.6□□□□□ -1.03
SPIDR-228ENST00000588781 KCNJ4P48050 445 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 KRT32Q14532 448 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 ZSCAN23Q3MJ62 389 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 CAVIN1Q6NZI2 390 aaKnown RBP8.6□□□□□ -1.03
SPIDR-228ENST00000588781 AACSQ86V21 672 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 ZGPATQ8N5A5 531 aaKnown RBP8.6□□□□□ -1.03
SPIDR-228ENST00000588781 KCNB2Q92953 911 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 ARXQ96QS3 562 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 HMG20BQ9P0W2 317 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 SMC3Q9UQE7 1217 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 SNX14Q9Y5W7 946 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 CYP46A1Q9Y6A2 500 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 SCN11AQ9UI33 1791 aa8.6□□□□□ -1.03
SPIDR-228ENST00000588781 ESPNB1AK53 854 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 PDCP20941 246 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 LRSAM1Q6UWE0 723 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 CCDC125Q86Z20 511 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 UNC5CLQ8IV45 518 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 FAM184AQ8NB25 1140 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 TMEM87AQ8NBN3 555 aa8.59□□□□□ -1.03
SPIDR-228ENST00000588781 SNRKQ9NRH2 765 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms