RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 CCDC93Q567U6 631 aa29.46■■■□□ 2.31
CAPNS1-205ENST00000588780 L3MBTL3Q96JM7 780 aaPredicted RBP29.46■■■□□ 2.31
CAPNS1-205ENST00000588780 HACL1Q9UJ83 578 aa29.46■■■□□ 2.31
CAPNS1-205ENST00000588780 HEG1Q9ULI3 1381 aa29.46■■■□□ 2.31
CAPNS1-205ENST00000588780 SCN7AQ01118 1682 aa29.45■■■□□ 2.31
CAPNS1-205ENST00000588780 A1BGP04217 495 aa29.45■■■□□ 2.31
CAPNS1-205ENST00000588780 ZNF790Q6PG37 636 aa29.45■■■□□ 2.31
CAPNS1-205ENST00000588780 WBP1LQ9NX94 342 aa29.45■■■□□ 2.31
CAPNS1-205ENST00000588780 UBR2Q8IWV8 1755 aa29.44■■■□□ 2.3
CAPNS1-205ENST00000588780 DIAPH1O60610 1272 aaKnown RBP29.44■■■□□ 2.3
CAPNS1-205ENST00000588780 NBPF5PQ86XG9 351 aaPredicted RBP29.44■■■□□ 2.3
CAPNS1-205ENST00000588780 ITGBL1O95965 494 aaPredicted RBP29.43■■■□□ 2.3
CAPNS1-205ENST00000588780 DEFB115Q30KQ5 88 aa29.43■■■□□ 2.3
CAPNS1-205ENST00000588780 DZIP3Q86Y13 1208 aaKnown RBP29.43■■■□□ 2.3
CAPNS1-205ENST00000588780 ZNF277Q9NRM2 450 aaPredicted RBP29.43■■■□□ 2.3
CAPNS1-205ENST00000588780 SCN4AP35499 1836 aa29.43■■■□□ 2.3
CAPNS1-205ENST00000588780 CAMTA2O94983 1202 aa29.42■■■□□ 2.3
CAPNS1-205ENST00000588780 EPHX2P34913 555 aa29.42■■■□□ 2.3
CAPNS1-205ENST00000588780 FMNL2Q96PY5 1086 aa29.42■■■□□ 2.3
CAPNS1-205ENST00000588780 ABT1Q9ULW3 272 aaKnown RBP29.42■■■□□ 2.3
CAPNS1-205ENST00000588780 ABHD8Q96I13 439 aa29.41■■■□□ 2.3
CAPNS1-205ENST00000588780 ZNF541Q9H0D2 1346 aa29.41■■■□□ 2.3
CAPNS1-205ENST00000588780 FKBP4Q02790 459 aaKnown RBP eCLIP29.4■■■□□ 2.3
CAPNS1-205ENST00000588780 FAM161AQ3B820 660 aa29.4■■■□□ 2.3
CAPNS1-205ENST00000588780 GNAT3A8MTJ3 354 aa29.39■■■□□ 2.3
CAPNS1-205ENST00000588780 NPR1P16066 1061 aa29.39■■■□□ 2.3
CAPNS1-205ENST00000588780 MAP1SQ66K74 1059 aaPredicted RBP29.39■■■□□ 2.3
CAPNS1-205ENST00000588780 PNMA8AQ86V59 439 aaPredicted RBP29.39■■■□□ 2.3
CAPNS1-205ENST00000588780 CNTROBQ8N137 903 aa29.39■■■□□ 2.3
CAPNS1-205ENST00000588780 HSPA8P11142 646 aaKnown RBP29.38■■■□□ 2.29
CAPNS1-205ENST00000588780 MAP2K1Q02750 393 aaPredicted RBP29.38■■■□□ 2.29
CAPNS1-205ENST00000588780 U2SURPO15042 1029 aaKnown RBP29.37■■■□□ 2.29
CAPNS1-205ENST00000588780 SLC34A2O95436 690 aa29.37■■■□□ 2.29
CAPNS1-205ENST00000588780 PAXIP1Q6ZW49 1069 aaPredicted RBP29.37■■■□□ 2.29
CAPNS1-205ENST00000588780 IL17REQ8NFR9 667 aa29.37■■■□□ 2.29
CAPNS1-205ENST00000588780 RNF123Q5XPI4 1314 aa29.37■■■□□ 2.29
CAPNS1-205ENST00000588780 PIP4K2AP48426 406 aaPredicted RBP29.36■■■□□ 2.29
CAPNS1-205ENST00000588780 AMER1Q5JTC6 1135 aaPredicted RBP29.36■■■□□ 2.29
CAPNS1-205ENST00000588780 GAS2L2Q8NHY3 880 aa29.36■■■□□ 2.29
CAPNS1-205ENST00000588780 C7orf43Q8WVR3 580 aa29.36■■■□□ 2.29
CAPNS1-205ENST00000588780 ZNF652Q9Y2D9 606 aa29.36■■■□□ 2.29
CAPNS1-205ENST00000588780 WDR33Q9C0J8 1336 aaKnown RBP29.36■■■□□ 2.29
CAPNS1-205ENST00000588780 RASSF10A6NK89 507 aa29.35■■■□□ 2.29
CAPNS1-205ENST00000588780 RTKN2Q8IZC4 609 aa29.35■■■□□ 2.29
CAPNS1-205ENST00000588780 FAM177BA6PVY3 158 aa29.34■■■□□ 2.29
CAPNS1-205ENST00000588780 GRM1Q13255 1194 aa29.34■■■□□ 2.29
CAPNS1-205ENST00000588780 OLFM4Q6UX06 510 aa29.34■■■□□ 2.29
CAPNS1-205ENST00000588780 BEGAINQ9BUH8 593 aa29.34■■■□□ 2.29
CAPNS1-205ENST00000588780 ARFGEF2Q9Y6D5 1785 aa29.34■■■□□ 2.29
CAPNS1-205ENST00000588780 CCDC85CA6NKD9 419 aa29.32■■■□□ 2.28
CAPNS1-205ENST00000588780 BTBD11A6QL63 1104 aa29.32■■■□□ 2.28
CAPNS1-205ENST00000588780 IARSP41252 1262 aaKnown RBP29.32■■■□□ 2.28
CAPNS1-205ENST00000588780 TPTE2Q6XPS3 522 aa29.32■■■□□ 2.28
CAPNS1-205ENST00000588780 GTF2E1P29083 439 aaPredicted RBP29.31■■■□□ 2.28
CAPNS1-205ENST00000588780 CC2D1BQ5T0F9 858 aaKnown RBP29.31■■■□□ 2.28
CAPNS1-205ENST00000588780 SYNE4Q8N205 404 aa29.31■■■□□ 2.28
CAPNS1-205ENST00000588780 JDP2Q8WYK2 163 aa29.31■■■□□ 2.28
CAPNS1-205ENST00000588780 KCNQ3O43525 872 aa29.3■■■□□ 2.28
CAPNS1-205ENST00000588780 TRIM26Q12899 539 aaPredicted RBP29.3■■■□□ 2.28
CAPNS1-205ENST00000588780 CNGB1Q14028 1251 aaPredicted RBP29.3■■■□□ 2.28
CAPNS1-205ENST00000588780 CLEC4GQ6UXB4 293 aa29.3■■■□□ 2.28
CAPNS1-205ENST00000588780 NIP7Q9Y221 180 aaKnown RBP eCLIP29.3■■■□□ 2.28
CAPNS1-205ENST00000588780 GJA3Q9Y6H8 435 aa29.3■■■□□ 2.28
CAPNS1-205ENST00000588780 GPC2Q8N158 579 aa29.29■■■□□ 2.28
CAPNS1-205ENST00000588780 PCGF6Q9BYE7 350 aa29.29■■■□□ 2.28
CAPNS1-205ENST00000588780 USP16Q9Y5T5 823 aa29.29■■■□□ 2.28
CAPNS1-205ENST00000588780 LMOD1P29536 600 aaPredicted RBP29.28■■■□□ 2.28
CAPNS1-205ENST00000588780 FZD9O00144 591 aa29.27■■■□□ 2.28
CAPNS1-205ENST00000588780 ALDH1B1P30837 517 aa29.27■■■□□ 2.28
CAPNS1-205ENST00000588780 EIF6P56537 245 aaKnown RBP29.27■■■□□ 2.28
CAPNS1-205ENST00000588780 DDX21Q9NR30 783 aaKnown RBP eCLIP29.27■■■□□ 2.28
CAPNS1-205ENST00000588780 BCORQ6W2J9 1755 aa29.26■■■□□ 2.28
CAPNS1-205ENST00000588780 MLLT1Q03111 559 aaPredicted RBP29.26■■■□□ 2.27
CAPNS1-205ENST00000588780 ECE1P42892 770 aa29.25■■■□□ 2.27
CAPNS1-205ENST00000588780 CAPNS2Q96L46 248 aa29.25■■■□□ 2.27
CAPNS1-205ENST00000588780 CFAP44Q96MT7 982 aa29.24■■■□□ 2.27
CAPNS1-205ENST00000588780 KLRG2A4D1S0 409 aaPredicted RBP29.23■■■□□ 2.27
CAPNS1-205ENST00000588780 ADAMTSL1Q8N6G6 1762 aa29.23■■■□□ 2.27
CAPNS1-205ENST00000588780 PRAMEF22A3QJZ6 481 aa29.22■■■□□ 2.27
CAPNS1-205ENST00000588780 GPR101Q96P66 508 aaPredicted RBP29.22■■■□□ 2.27
CAPNS1-205ENST00000588780 SIPA1L3O60292 1781 aaPredicted RBP29.21■■■□□ 2.27
CAPNS1-205ENST00000588780 SNRPA1P09661 255 aaKnown RBP29.21■■■□□ 2.27
CAPNS1-205ENST00000588780 CYP4F22Q6NT55 531 aa29.21■■■□□ 2.27
CAPNS1-205ENST00000588780 CLSPNQ9HAW4 1339 aa29.2■■■□□ 2.27
CAPNS1-205ENST00000588780 FMR1Q06787 632 aaKnown RBP eCLIP29.19■■■□□ 2.26
CAPNS1-205ENST00000588780 CEMIPQ8WUJ3 1361 aa29.18■■■□□ 2.26
CAPNS1-205ENST00000588780 PSMD1Q99460 953 aa29.18■■■□□ 2.26
CAPNS1-205ENST00000588780 TSKSQ9UJT2 592 aa29.18■■■□□ 2.26
CAPNS1-205ENST00000588780 LARGE2Q8N3Y3 721 aa29.17■■■□□ 2.26
CAPNS1-205ENST00000588780 RTF1Q92541 710 aaKnown RBP29.17■■■□□ 2.26
CAPNS1-205ENST00000588780 PRKAR2BP31323 418 aa29.16■■■□□ 2.26
CAPNS1-205ENST00000588780 EPS15P42566 896 aa29.16■■■□□ 2.26
CAPNS1-205ENST00000588780 RPGRQ92834 1020 aaKnown RBP29.15■■■□□ 2.26
CAPNS1-205ENST00000588780 PHACTR3Q96KR7 559 aa29.15■■■□□ 2.26
CAPNS1-205ENST00000588780 TRAF5O00463 557 aa29.14■■■□□ 2.26
CAPNS1-205ENST00000588780 HLFQ16534 295 aa29.14■■■□□ 2.26
CAPNS1-205ENST00000588780 CC2D2BQ6DHV5 1058 aa29.14■■■□□ 2.26
CAPNS1-205ENST00000588780 KIF7Q2M1P5 1343 aa29.14■■■□□ 2.25
CAPNS1-205ENST00000588780 NBPF26B4DH59 902 aa29.13■■■□□ 2.25
CAPNS1-205ENST00000588780 TCERG1O14776 1098 aaKnown RBP29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms