RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 PRIM1P49642 420 aaKnown RBP20.95■□□□□ 0.94
NFIX-209ENST00000587760 PLEKHM2Q8IWE5 1019 aa20.95■□□□□ 0.94
NFIX-209ENST00000587760 SYTL4Q96C24 671 aaPredicted RBP20.95■□□□□ 0.94
NFIX-209ENST00000587760 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.94
NFIX-209ENST00000587760 A1BGP04217 495 aa20.94■□□□□ 0.94
NFIX-209ENST00000587760 IPO9Q96P70 1041 aaKnown RBP20.94■□□□□ 0.94
NFIX-209ENST00000587760 OSBPL3Q9H4L5 887 aa20.94■□□□□ 0.94
NFIX-209ENST00000587760 NPM2Q86SE8 214 aaKnown RBP20.94■□□□□ 0.94
NFIX-209ENST00000587760 ERC1Q8IUD2 1116 aa20.94■□□□□ 0.94
NFIX-209ENST00000587760 MARCH10Q8NA82 808 aaPredicted RBP20.94■□□□□ 0.94
NFIX-209ENST00000587760 SMARCC1Q92922 1105 aaPredicted RBP20.94■□□□□ 0.94
NFIX-209ENST00000587760 KIF1BPQ96EK5 621 aa20.94■□□□□ 0.94
NFIX-209ENST00000587760 USP21Q9UK80 565 aa20.94■□□□□ 0.94
NFIX-209ENST00000587760 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
NFIX-209ENST00000587760 NOP58Q9Y2X3 529 aaKnown RBP20.94■□□□□ 0.94
NFIX-209ENST00000587760 DNAJC10Q8IXB1 793 aa20.93■□□□□ 0.94
NFIX-209ENST00000587760 SURF6O75683 361 aaKnown RBP20.92■□□□□ 0.94
NFIX-209ENST00000587760 TTC22Q5TAA0 569 aa20.92■□□□□ 0.94
NFIX-209ENST00000587760 MEX3CQ5U5Q3 659 aaKnown RBP20.92■□□□□ 0.94
NFIX-209ENST00000587760 KIF6Q6ZMV9 814 aa20.92■□□□□ 0.94
NFIX-209ENST00000587760 NUP188Q5SRE5 1749 aa20.92■□□□□ 0.94
NFIX-209ENST00000587760 AFDNP55196 1824 aaKnown RBP20.91■□□□□ 0.94
NFIX-209ENST00000587760 PIP4K2AP48426 406 aaPredicted RBP20.91■□□□□ 0.94
NFIX-209ENST00000587760 CCDC191Q8NCU4 936 aa20.91■□□□□ 0.94
NFIX-209ENST00000587760 CICQ96RK0 1608 aaPredicted RBP20.9■□□□□ 0.94
NFIX-209ENST00000587760 AOX1Q06278 1338 aa20.9■□□□□ 0.94
NFIX-209ENST00000587760 APBB1O00213 710 aa20.9■□□□□ 0.94
NFIX-209ENST00000587760 FAM98CQ17RN3 349 aaKnown RBP20.9■□□□□ 0.94
NFIX-209ENST00000587760 SUCLG2Q96I99 432 aa20.9■□□□□ 0.94
NFIX-209ENST00000587760 CWC25Q9NXE8 425 aaPredicted RBP20.9■□□□□ 0.94
NFIX-209ENST00000587760 CYP19A1P11511 503 aaPredicted RBP20.89■□□□□ 0.94
NFIX-209ENST00000587760 SMARCA5O60264 1052 aaPredicted RBP20.88■□□□□ 0.93
NFIX-209ENST00000587760 CDC45O75419 566 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
NFIX-209ENST00000587760 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 TTLL7Q6ZT98 887 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 A0A087WZG4 1122 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 HSPA1LP34931 641 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 PDE1AP54750 535 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 CASC1Q6TDU7 716 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 RHPN1Q8TCX5 695 aa20.88■□□□□ 0.93
NFIX-209ENST00000587760 BICC1Q9H694 974 aaKnown RBP20.88■□□□□ 0.93
NFIX-209ENST00000587760 KAT6BQ8WYB5 2073 aa20.87■□□□□ 0.93
NFIX-209ENST00000587760 IL6STP40189 918 aaPredicted RBP20.87■□□□□ 0.93
NFIX-209ENST00000587760 OS9Q13438 667 aaPredicted RBP20.87■□□□□ 0.93
NFIX-209ENST00000587760 STAP2Q9UGK3 403 aa20.87■□□□□ 0.93
NFIX-209ENST00000587760 TJP1Q07157 1748 aa20.86■□□□□ 0.93
NFIX-209ENST00000587760 MX1P20591 662 aa20.86■□□□□ 0.93
NFIX-209ENST00000587760 C16orf71Q8IYS4 520 aaPredicted RBP20.86■□□□□ 0.93
NFIX-209ENST00000587760 THSD7AQ9UPZ6 1657 aa20.86■□□□□ 0.93
NFIX-209ENST00000587760 SALL3Q9BXA9 1300 aa20.85■□□□□ 0.93
NFIX-209ENST00000587760 H7C1W4 665 aa20.85■□□□□ 0.93
NFIX-209ENST00000587760 TCIRG1Q13488 830 aa20.85■□□□□ 0.93
NFIX-209ENST00000587760 RABL6Q3YEC7 729 aaPredicted RBP20.85■□□□□ 0.93
NFIX-209ENST00000587760 KAZALD1Q96I82 304 aa20.85■□□□□ 0.93
NFIX-209ENST00000587760 ZNF831Q5JPB2 1677 aa20.84■□□□□ 0.93
NFIX-209ENST00000587760 MAP3K15Q6ZN16 1313 aa20.84■□□□□ 0.93
NFIX-209ENST00000587760 ATP5J2-PTCD1G3V325 749 aa20.84■□□□□ 0.93
NFIX-209ENST00000587760 G3BP1Q13283 466 aaKnown RBP eCLIP20.84■□□□□ 0.93
NFIX-209ENST00000587760 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
NFIX-209ENST00000587760 TBC1D32Q96NH3 1257 aa20.84■□□□□ 0.93
NFIX-209ENST00000587760 ISCA1Q9BUE6 129 aa20.84■□□□□ 0.93
NFIX-209ENST00000587760 ZBTB3Q9H5J0 574 aa20.84■□□□□ 0.93
NFIX-209ENST00000587760 LOC102724428A0A0B4J2F2 783 aa20.83■□□□□ 0.93
NFIX-209ENST00000587760 ERVV-1B6SEH8 477 aa20.83■□□□□ 0.93
NFIX-209ENST00000587760 SEC24BO95487 1268 aa20.83■□□□□ 0.93
NFIX-209ENST00000587760 GSPT1P15170 499 aaKnown RBP20.83■□□□□ 0.93
NFIX-209ENST00000587760 SIK1P57059 783 aa20.83■□□□□ 0.93
NFIX-209ENST00000587760 CLASRPQ8N2M8 674 aaKnown RBP20.83■□□□□ 0.93
NFIX-209ENST00000587760 ACSBG1Q96GR2 724 aa20.83■□□□□ 0.93
NFIX-209ENST00000587760 SLC4A9Q96Q91 983 aa20.83■□□□□ 0.93
NFIX-209ENST00000587760 TRPC5Q9UL62 973 aaPredicted RBP20.83■□□□□ 0.93
NFIX-209ENST00000587760 PALLDQ8WX93 1383 aa20.83■□□□□ 0.93
NFIX-209ENST00000587760 A0A0G2JS52 829 aa20.82■□□□□ 0.92
NFIX-209ENST00000587760 MYT1Q01538 1121 aa20.82■□□□□ 0.92
NFIX-209ENST00000587760 GIGYF2Q6Y7W6 1299 aaKnown RBP20.82■□□□□ 0.92
NFIX-209ENST00000587760 GJD4Q96KN9 370 aaPredicted RBP20.82■□□□□ 0.92
NFIX-209ENST00000587760 ATP6V1AP38606 617 aa20.81■□□□□ 0.92
NFIX-209ENST00000587760 CASP7P55210 303 aa20.81■□□□□ 0.92
NFIX-209ENST00000587760 OTUD7AQ8TE49 926 aaPredicted RBP20.81■□□□□ 0.92
NFIX-209ENST00000587760 GPATCH3Q96I76 525 aa20.81■□□□□ 0.92
NFIX-209ENST00000587760 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
NFIX-209ENST00000587760 ZNF330Q9Y3S2 320 aaPredicted RBP20.81■□□□□ 0.92
NFIX-209ENST00000587760 AFF2P51816 1311 aa20.81■□□□□ 0.92
NFIX-209ENST00000587760 TBC1D9Q6ZT07 1266 aa20.81■□□□□ 0.92
NFIX-209ENST00000587760 COPRSQ9NQ92 184 aa20.81■□□□□ 0.92
NFIX-209ENST00000587760 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
NFIX-209ENST00000587760 ATRNO75882 1429 aa20.8■□□□□ 0.92
NFIX-209ENST00000587760 TTC41PQ6P2S7 1318 aa20.8■□□□□ 0.92
NFIX-209ENST00000587760 RREB1Q92766 1687 aa20.8■□□□□ 0.92
NFIX-209ENST00000587760 SDSP20132 328 aa20.8■□□□□ 0.92
NFIX-209ENST00000587760 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
NFIX-209ENST00000587760 ERICH6Q7L0X2 663 aa20.8■□□□□ 0.92
NFIX-209ENST00000587760 ZBTB1Q9Y2K1 713 aa20.8■□□□□ 0.92
NFIX-209ENST00000587760 USP42Q9H9J4 1324 aaKnown RBP20.79■□□□□ 0.92
NFIX-209ENST00000587760 ONECUT3O60422 494 aaPredicted RBP20.79■□□□□ 0.92
NFIX-209ENST00000587760 C22orf23Q9BZE7 217 aa20.79■□□□□ 0.92
NFIX-209ENST00000587760 IL1RAPL2Q9NP60 686 aa20.79■□□□□ 0.92
NFIX-209ENST00000587760 ERC2O15083 957 aa20.78■□□□□ 0.92
NFIX-209ENST00000587760 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms