RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 CNKSR1Q969H4 720 aa20.87■□□□□ 0.93
VAT1-205ENST00000587173 ZNF652Q9Y2D9 606 aa20.87■□□□□ 0.93
VAT1-205ENST00000587173 BCORQ6W2J9 1755 aa20.87■□□□□ 0.93
VAT1-205ENST00000587173 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
VAT1-205ENST00000587173 SRGNP10124 158 aa20.86■□□□□ 0.93
VAT1-205ENST00000587173 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
VAT1-205ENST00000587173 NBPF5PQ86XG9 351 aaPredicted RBP20.86■□□□□ 0.93
VAT1-205ENST00000587173 WDR90Q96KV7 1748 aa20.86■□□□□ 0.93
VAT1-205ENST00000587173 NBPF26B4DH59 902 aa20.85■□□□□ 0.93
VAT1-205ENST00000587173 PRPF40BQ6NWY9 871 aaKnown RBP20.85■□□□□ 0.93
VAT1-205ENST00000587173 NBPF10Q6P3W6 841 aaKnown RBP20.85■□□□□ 0.93
VAT1-205ENST00000587173 NBPF15Q8N660 670 aa20.85■□□□□ 0.93
VAT1-205ENST00000587173 MASTLQ96GX5 879 aa20.85■□□□□ 0.93
VAT1-205ENST00000587173 TIAM2Q8IVF5 1701 aa20.84■□□□□ 0.93
VAT1-205ENST00000587173 ERFEQ4G0M1 354 aa20.84■□□□□ 0.93
VAT1-205ENST00000587173 KLRG1Q96E93 195 aa20.84■□□□□ 0.93
VAT1-205ENST00000587173 TAOK3Q9H2K8 898 aa20.84■□□□□ 0.93
VAT1-205ENST00000587173 MIS18AQ9NYP9 233 aa20.84■□□□□ 0.93
VAT1-205ENST00000587173 LTBP3Q9NS15 1303 aa20.83■□□□□ 0.93
VAT1-205ENST00000587173 DPY19L2Q6NUT2 758 aa20.83■□□□□ 0.93
VAT1-205ENST00000587173 NIP7Q9Y221 180 aaKnown RBP eCLIP20.82■□□□□ 0.92
VAT1-205ENST00000587173 RGL2O15211 777 aa20.81■□□□□ 0.92
VAT1-205ENST00000587173 SOGA3Q5TF21 947 aa20.81■□□□□ 0.92
VAT1-205ENST00000587173 FAM177BA6PVY3 158 aa20.8■□□□□ 0.92
VAT1-205ENST00000587173 POTECB2RU33 542 aa20.8■□□□□ 0.92
VAT1-205ENST00000587173 TPTE2Q6XPS3 522 aa20.8■□□□□ 0.92
VAT1-205ENST00000587173 PNISRQ8TF01 805 aaKnown RBP20.8■□□□□ 0.92
VAT1-205ENST00000587173 NPR1P16066 1061 aa20.79■□□□□ 0.92
VAT1-205ENST00000587173 HLFQ16534 295 aa20.79■□□□□ 0.92
VAT1-205ENST00000587173 PLEKHF1Q96S99 279 aa20.79■□□□□ 0.92
VAT1-205ENST00000587173 NFE2L2Q16236 605 aa20.78■□□□□ 0.92
VAT1-205ENST00000587173 PNNQ9H307 717 aaKnown RBP20.78■□□□□ 0.92
VAT1-205ENST00000587173 SLX4Q8IY92 1834 aa20.78■□□□□ 0.92
VAT1-205ENST00000587173 FER1L6Q2WGJ9 1857 aa20.77■□□□□ 0.92
VAT1-205ENST00000587173 KLRG2A4D1S0 409 aaPredicted RBP20.77■□□□□ 0.92
VAT1-205ENST00000587173 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
VAT1-205ENST00000587173 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
VAT1-205ENST00000587173 JMYQ8N9B5 988 aa20.77■□□□□ 0.92
VAT1-205ENST00000587173 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
VAT1-205ENST00000587173 CCDC88AQ3V6T2 1871 aa20.76■□□□□ 0.91
VAT1-205ENST00000587173 EIF4A1P60842 406 aaKnown RBP20.76■□□□□ 0.91
VAT1-205ENST00000587173 C7orf43Q8WVR3 580 aa20.76■□□□□ 0.91
VAT1-205ENST00000587173 DDNO94850 711 aaPredicted RBP20.75■□□□□ 0.91
VAT1-205ENST00000587173 GTF2E1P29083 439 aaPredicted RBP20.75■□□□□ 0.91
VAT1-205ENST00000587173 MAPK8IP3Q9UPT6 1336 aa20.75■□□□□ 0.91
VAT1-205ENST00000587173 LAMB4A4D0S4 1761 aa20.74■□□□□ 0.91
VAT1-205ENST00000587173 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
VAT1-205ENST00000587173 ERVV-1B6SEH8 477 aa20.73■□□□□ 0.91
VAT1-205ENST00000587173 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
VAT1-205ENST00000587173 MAP3K15Q6ZN16 1313 aa20.73■□□□□ 0.91
VAT1-205ENST00000587173 MYL6BP14649 208 aa20.72■□□□□ 0.91
VAT1-205ENST00000587173 FKBP4Q02790 459 aaKnown RBP eCLIP20.72■□□□□ 0.91
VAT1-205ENST00000587173 OLFM4Q6UX06 510 aa20.72■□□□□ 0.91
VAT1-205ENST00000587173 KIF6Q6ZMV9 814 aa20.72■□□□□ 0.91
VAT1-205ENST00000587173 TTLL7Q6ZT98 887 aa20.72■□□□□ 0.91
VAT1-205ENST00000587173 CACNA1SQ13698 1873 aa20.72■□□□□ 0.91
VAT1-205ENST00000587173 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
VAT1-205ENST00000587173 ABCC12Q96J65 1359 aa20.72■□□□□ 0.91
VAT1-205ENST00000587173 DICER1Q9UPY3 1922 aaKnown RBP20.71■□□□□ 0.91
VAT1-205ENST00000587173 NUTM1Q86Y26 1132 aa20.71■□□□□ 0.91
VAT1-205ENST00000587173 NYXQ9GZU5 481 aa20.71■□□□□ 0.91
VAT1-205ENST00000587173 ZNF277Q9NRM2 450 aaPredicted RBP20.71■□□□□ 0.91
VAT1-205ENST00000587173 ALDH1B1P30837 517 aa20.7■□□□□ 0.9
VAT1-205ENST00000587173 CHADLQ6NUI6 762 aa20.7■□□□□ 0.9
VAT1-205ENST00000587173 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
VAT1-205ENST00000587173 DLG5Q8TDM6 1919 aa20.69■□□□□ 0.9
VAT1-205ENST00000587173 POTEIP0CG38 1075 aa20.69■□□□□ 0.9
VAT1-205ENST00000587173 POTEJP0CG39 1038 aa20.69■□□□□ 0.9
VAT1-205ENST00000587173 ZBTB3Q9H5J0 574 aa20.69■□□□□ 0.9
VAT1-205ENST00000587173 IQCA1LA6NCM1 817 aa20.68■□□□□ 0.9
VAT1-205ENST00000587173 GPTP24298 496 aa20.68■□□□□ 0.9
VAT1-205ENST00000587173 RALBP1Q15311 655 aa20.68■□□□□ 0.9
VAT1-205ENST00000587173 CRY2Q49AN0 593 aa20.68■□□□□ 0.9
VAT1-205ENST00000587173 L3MBTL3Q96JM7 780 aaPredicted RBP20.68■□□□□ 0.9
VAT1-205ENST00000587173 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
VAT1-205ENST00000587173 ERBB4Q15303 1308 aa20.67■□□□□ 0.9
VAT1-205ENST00000587173 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
VAT1-205ENST00000587173 ZNF541Q9H0D2 1346 aa20.67■□□□□ 0.9
VAT1-205ENST00000587173 RIPK4P57078 832 aa20.66■□□□□ 0.9
VAT1-205ENST00000587173 SUSD4Q5VX71 490 aa20.66■□□□□ 0.9
VAT1-205ENST00000587173 SYNE4Q8N205 404 aa20.66■□□□□ 0.9
VAT1-205ENST00000587173 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
VAT1-205ENST00000587173 IARSP41252 1262 aaKnown RBP20.65■□□□□ 0.9
VAT1-205ENST00000587173 RPGRQ92834 1020 aaKnown RBP20.65■□□□□ 0.9
VAT1-205ENST00000587173 TAF1DQ9H5J8 278 aaPredicted RBP20.65■□□□□ 0.9
VAT1-205ENST00000587173 COL13A1Q5TAT6 717 aaPredicted RBP20.64■□□□□ 0.89
VAT1-205ENST00000587173 GIGYF2Q6Y7W6 1299 aaKnown RBP20.64■□□□□ 0.89
VAT1-205ENST00000587173 LDHDQ86WU2 507 aa20.64■□□□□ 0.89
VAT1-205ENST00000587173 ZNF34Q8IZ26 560 aa20.64■□□□□ 0.89
VAT1-205ENST00000587173 CREBZFQ9NS37 354 aa20.64■□□□□ 0.89
VAT1-205ENST00000587173 RIC1Q4ADV7 1423 aa20.63■□□□□ 0.89
VAT1-205ENST00000587173 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
VAT1-205ENST00000587173 PSMD1Q99460 953 aa20.63■□□□□ 0.89
VAT1-205ENST00000587173 SNED1Q8TER0 1413 aa20.62■□□□□ 0.89
VAT1-205ENST00000587173 FZD9O00144 591 aa20.62■□□□□ 0.89
VAT1-205ENST00000587173 NTSR2O95665 410 aa20.62■□□□□ 0.89
VAT1-205ENST00000587173 HSPA1AP0DMV8 641 aaKnown RBP20.62■□□□□ 0.89
VAT1-205ENST00000587173 HSPA1BP0DMV9 641 aaKnown RBP20.62■□□□□ 0.89
VAT1-205ENST00000587173 LMOD3Q0VAK6 560 aa20.62■□□□□ 0.89
VAT1-205ENST00000587173 HACL1Q9UJ83 578 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms