RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 DOT1LQ8TEK3 1739 aa12.68□□□□□ -0.38
IFT20-213ENST00000583796 GRM8O00222 908 aa12.67□□□□□ -0.38
IFT20-213ENST00000583796 DDB1Q16531 1140 aa12.67□□□□□ -0.38
IFT20-213ENST00000583796 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
IFT20-213ENST00000583796 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
IFT20-213ENST00000583796 XAGE3Q8WTP9 111 aa12.67□□□□□ -0.38
IFT20-213ENST00000583796 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
IFT20-213ENST00000583796 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
IFT20-213ENST00000583796 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
IFT20-213ENST00000583796 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
IFT20-213ENST00000583796 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
IFT20-213ENST00000583796 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
IFT20-213ENST00000583796 SSUH2Q9Y2M2 353 aa12.66□□□□□ -0.38
IFT20-213ENST00000583796 STARD3NLO95772 234 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 NBPF7P0C2Y1 421 aaPredicted RBP12.65□□□□□ -0.38
IFT20-213ENST00000583796 MYL6BP14649 208 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 VPS72Q15906 364 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 FNBP4Q8N3X1 1017 aaPredicted RBP12.65□□□□□ -0.38
IFT20-213ENST00000583796 PIGBQ92521 554 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 LRRCC1Q9C099 1032 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 ZNF831Q5JPB2 1677 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 NUTM2BA6NNL0 878 aaPredicted RBP12.65□□□□□ -0.38
IFT20-213ENST00000583796 NEURL1BA8MQ27 555 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 NUTM2EB1AL46 878 aaPredicted RBP12.65□□□□□ -0.38
IFT20-213ENST00000583796 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
IFT20-213ENST00000583796 NUTM2AQ8IVF1 878 aaPredicted RBP12.65□□□□□ -0.38
IFT20-213ENST00000583796 PLEKHM2Q8IWE5 1019 aa12.65□□□□□ -0.38
IFT20-213ENST00000583796 AOX1Q06278 1338 aa12.64□□□□□ -0.39
IFT20-213ENST00000583796 BCL9LQ86UU0 1499 aa12.64□□□□□ -0.39
IFT20-213ENST00000583796 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
IFT20-213ENST00000583796 SRGAP3O43295 1099 aa12.64□□□□□ -0.39
IFT20-213ENST00000583796 IGKV5-2P06315 115 aa12.64□□□□□ -0.39
IFT20-213ENST00000583796 GCKRQ14397 625 aa12.64□□□□□ -0.39
IFT20-213ENST00000583796 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
IFT20-213ENST00000583796 ATG3Q9NT62 314 aa12.64□□□□□ -0.39
IFT20-213ENST00000583796 NOP58Q9Y2X3 529 aaKnown RBP12.64□□□□□ -0.39
IFT20-213ENST00000583796 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
IFT20-213ENST00000583796 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
IFT20-213ENST00000583796 TTC22Q5TAA0 569 aa12.63□□□□□ -0.39
IFT20-213ENST00000583796 NBPF14Q5TI25 921 aa12.63□□□□□ -0.39
IFT20-213ENST00000583796 NBPF10Q6P3W6 841 aaKnown RBP12.63□□□□□ -0.39
IFT20-213ENST00000583796 ERC1Q8IUD2 1116 aa12.63□□□□□ -0.39
IFT20-213ENST00000583796 NBPF15Q8N660 670 aa12.63□□□□□ -0.39
IFT20-213ENST00000583796 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
IFT20-213ENST00000583796 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
IFT20-213ENST00000583796 CWF19L2Q2TBE0 894 aaKnown RBP12.62□□□□□ -0.39
IFT20-213ENST00000583796 KIF1BPQ96EK5 621 aa12.62□□□□□ -0.39
IFT20-213ENST00000583796 TJP1Q07157 1748 aa12.62□□□□□ -0.39
IFT20-213ENST00000583796 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
IFT20-213ENST00000583796 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
IFT20-213ENST00000583796 MYD88Q99836 296 aa12.61□□□□□ -0.39
IFT20-213ENST00000583796 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
IFT20-213ENST00000583796 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
IFT20-213ENST00000583796 SALL3Q9BXA9 1300 aa12.61□□□□□ -0.39
IFT20-213ENST00000583796 RREB1Q92766 1687 aa12.61□□□□□ -0.39
IFT20-213ENST00000583796 CDC45O75419 566 aa12.6□□□□□ -0.39
IFT20-213ENST00000583796 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
IFT20-213ENST00000583796 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
IFT20-213ENST00000583796 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
IFT20-213ENST00000583796 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
IFT20-213ENST00000583796 SURF6O75683 361 aaKnown RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 MX1P20591 662 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 PDE1AP54750 535 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 TUBGCP6Q96RT7 1819 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 A1BGP04217 495 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 RABL6Q3YEC7 729 aaPredicted RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 HSP90AB3PQ58FF7 597 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 MARCH10Q8NA82 808 aaPredicted RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 SUCLG2Q96I99 432 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 C8orf37Q96NL8 207 aa12.59□□□□□ -0.39
IFT20-213ENST00000583796 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
IFT20-213ENST00000583796 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
IFT20-213ENST00000583796 GSPT1P15170 499 aaKnown RBP12.58□□□□□ -0.4
IFT20-213ENST00000583796 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
IFT20-213ENST00000583796 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
IFT20-213ENST00000583796 KAZALD1Q96I82 304 aa12.58□□□□□ -0.4
IFT20-213ENST00000583796 USP42Q9H9J4 1324 aaKnown RBP12.58□□□□□ -0.4
IFT20-213ENST00000583796 ANKRD36CQ5JPF3 1778 aa12.57□□□□□ -0.4
IFT20-213ENST00000583796 H7C1W4 665 aa12.57□□□□□ -0.4
IFT20-213ENST00000583796 SYTL4Q96C24 671 aaPredicted RBP12.57□□□□□ -0.4
IFT20-213ENST00000583796 BICC1Q9H694 974 aaKnown RBP12.57□□□□□ -0.4
IFT20-213ENST00000583796 TTC41PQ6P2S7 1318 aa12.57□□□□□ -0.4
IFT20-213ENST00000583796 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
IFT20-213ENST00000583796 A0A087WZG4 1122 aa12.56□□□□□ -0.4
IFT20-213ENST00000583796 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
IFT20-213ENST00000583796 SMARCA5O60264 1052 aaPredicted RBP12.56□□□□□ -0.4
IFT20-213ENST00000583796 SEC24BO95487 1268 aa12.56□□□□□ -0.4
IFT20-213ENST00000583796 CASP7P55210 303 aa12.56□□□□□ -0.4
IFT20-213ENST00000583796 TTLL7Q6ZT98 887 aa12.56□□□□□ -0.4
IFT20-213ENST00000583796 CLASRPQ8N2M8 674 aaKnown RBP12.56□□□□□ -0.4
IFT20-213ENST00000583796 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
IFT20-213ENST00000583796 COPRSQ9NQ92 184 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms