RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
RFFL-209ENST00000581265 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
RFFL-209ENST00000581265 DZIP3Q86Y13 1208 aaKnown RBP14.15□□□□□ -0.14
RFFL-209ENST00000581265 ZNF622Q969S3 477 aaKnown RBP eCLIP14.15□□□□□ -0.14
RFFL-209ENST00000581265 DLEC1Q9Y238 1755 aa14.14□□□□□ -0.15
RFFL-209ENST00000581265 MLLT1Q03111 559 aaPredicted RBP14.14□□□□□ -0.15
RFFL-209ENST00000581265 MCM10Q7L590 875 aa14.14□□□□□ -0.15
RFFL-209ENST00000581265 CCDC24Q8N4L8 307 aa14.14□□□□□ -0.15
RFFL-209ENST00000581265 CNBD1Q8NA66 436 aa14.14□□□□□ -0.15
RFFL-209ENST00000581265 ABHD8Q96I13 439 aa14.14□□□□□ -0.15
RFFL-209ENST00000581265 PRAMEF22A3QJZ6 481 aa14.13□□□□□ -0.15
RFFL-209ENST00000581265 RGL2O15211 777 aa14.13□□□□□ -0.15
RFFL-209ENST00000581265 C21orf2O43822 256 aa14.13□□□□□ -0.15
RFFL-209ENST00000581265 SRGNP10124 158 aa14.13□□□□□ -0.15
RFFL-209ENST00000581265 LBX1P52954 281 aa14.13□□□□□ -0.15
RFFL-209ENST00000581265 TAF7Q15545 349 aaPredicted RBP14.13□□□□□ -0.15
RFFL-209ENST00000581265 DCTN1Q14203 1278 aa14.12□□□□□ -0.15
RFFL-209ENST00000581265 STYK1Q6J9G0 422 aa14.12□□□□□ -0.15
RFFL-209ENST00000581265 CNKSR1Q969H4 720 aa14.12□□□□□ -0.15
RFFL-209ENST00000581265 CNTNAP1P78357 1384 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 CCDC85CA6NKD9 419 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 POTECB2RU33 542 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 NBPF26B4DH59 902 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 NPHP1O15259 732 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 PIP4K2AP48426 406 aaPredicted RBP14.11□□□□□ -0.15
RFFL-209ENST00000581265 ST5P78524 1137 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 NBPF10Q6P3W6 841 aaKnown RBP14.11□□□□□ -0.15
RFFL-209ENST00000581265 NBPF15Q8N660 670 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 ANKRD31Q8N7Z5 1873 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 MASTLQ96GX5 879 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 ZNF652Q9Y2D9 606 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
RFFL-209ENST00000581265 SCN7AQ01118 1682 aa14.1□□□□□ -0.15
RFFL-209ENST00000581265 KLRG2A4D1S0 409 aaPredicted RBP14.1□□□□□ -0.15
RFFL-209ENST00000581265 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
RFFL-209ENST00000581265 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
RFFL-209ENST00000581265 VEGFBP49765 207 aa14.09□□□□□ -0.15
RFFL-209ENST00000581265 SOGA3Q5TF21 947 aa14.09□□□□□ -0.15
RFFL-209ENST00000581265 PRPF40BQ6NWY9 871 aaKnown RBP14.09□□□□□ -0.15
RFFL-209ENST00000581265 TPTE2Q6XPS3 522 aa14.09□□□□□ -0.15
RFFL-209ENST00000581265 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
RFFL-209ENST00000581265 C7orf43Q8WVR3 580 aa14.09□□□□□ -0.15
RFFL-209ENST00000581265 TAOK3Q9H2K8 898 aa14.09□□□□□ -0.15
RFFL-209ENST00000581265 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
RFFL-209ENST00000581265 MIS18AQ9NYP9 233 aa14.08□□□□□ -0.16
RFFL-209ENST00000581265 CCDC88AQ3V6T2 1871 aa14.08□□□□□ -0.16
RFFL-209ENST00000581265 NEFMP07197 916 aa14.07□□□□□ -0.16
RFFL-209ENST00000581265 NPR1P16066 1061 aa14.07□□□□□ -0.16
RFFL-209ENST00000581265 PNISRQ8TF01 805 aaKnown RBP14.07□□□□□ -0.16
RFFL-209ENST00000581265 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
RFFL-209ENST00000581265 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
RFFL-209ENST00000581265 NIP7Q9Y221 180 aaKnown RBP eCLIP14.07□□□□□ -0.16
RFFL-209ENST00000581265 FER1L6Q2WGJ9 1857 aa14.06□□□□□ -0.16
RFFL-209ENST00000581265 TMEM88BA6NKF7 163 aa14.06□□□□□ -0.16
RFFL-209ENST00000581265 SLX4Q8IY92 1834 aa14.06□□□□□ -0.16
RFFL-209ENST00000581265 COL11A2P13942 1736 aaPredicted RBP14.05□□□□□ -0.16
RFFL-209ENST00000581265 BCORQ6W2J9 1755 aa14.05□□□□□ -0.16
RFFL-209ENST00000581265 HSPA8P11142 646 aaKnown RBP14.05□□□□□ -0.16
RFFL-209ENST00000581265 MAP2K1Q02750 393 aaPredicted RBP14.05□□□□□ -0.16
RFFL-209ENST00000581265 HLFQ16534 295 aa14.05□□□□□ -0.16
RFFL-209ENST00000581265 IQCA1LA6NCM1 817 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 ERVV-1B6SEH8 477 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 POTEIP0CG38 1075 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 POTEJP0CG39 1038 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 EIF4A1P60842 406 aaKnown RBP14.04□□□□□ -0.16
RFFL-209ENST00000581265 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 LDHDQ86WU2 507 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 BEGAINQ9BUH8 593 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 PNNQ9H307 717 aaKnown RBP14.04□□□□□ -0.16
RFFL-209ENST00000581265 CLEC11AQ9Y240 323 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
RFFL-209ENST00000581265 DICER1Q9UPY3 1922 aaKnown RBP14.03□□□□□ -0.16
RFFL-209ENST00000581265 DDNO94850 711 aaPredicted RBP14.03□□□□□ -0.16
RFFL-209ENST00000581265 ALDH1B1P30837 517 aa14.03□□□□□ -0.16
RFFL-209ENST00000581265 NFE2L2Q16236 605 aa14.03□□□□□ -0.16
RFFL-209ENST00000581265 DEFB115Q30KQ5 88 aa14.03□□□□□ -0.16
RFFL-209ENST00000581265 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.17
RFFL-209ENST00000581265 EAPPQ56P03 285 aaPredicted RBP14.02□□□□□ -0.17
RFFL-209ENST00000581265 RTKN2Q8IZC4 609 aa14.02□□□□□ -0.17
RFFL-209ENST00000581265 PCNTO95613 3336 aa14.02□□□□□ -0.17
RFFL-209ENST00000581265 MAP3K15Q6ZN16 1313 aa14.01□□□□□ -0.17
RFFL-209ENST00000581265 PASKQ96RG2 1323 aa14.01□□□□□ -0.17
RFFL-209ENST00000581265 FAM177BA6PVY3 158 aa14.01□□□□□ -0.17
RFFL-209ENST00000581265 RGS19P49795 217 aa14.01□□□□□ -0.17
RFFL-209ENST00000581265 FKBP4Q02790 459 aaKnown RBP eCLIP14.01□□□□□ -0.17
RFFL-209ENST00000581265 CRY2Q49AN0 593 aa14.01□□□□□ -0.17
RFFL-209ENST00000581265 NGEFQ8N5V2 710 aa14.01□□□□□ -0.17
RFFL-209ENST00000581265 L3MBTL3Q96JM7 780 aaPredicted RBP14.01□□□□□ -0.17
RFFL-209ENST00000581265 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
RFFL-209ENST00000581265 RRP7AQ9Y3A4 280 aaKnown RBP14.01□□□□□ -0.17
RFFL-209ENST00000581265 TTLL7Q6ZT98 887 aa14□□□□□ -0.17
RFFL-209ENST00000581265 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
RFFL-209ENST00000581265 THUMPD2Q9BTF0 503 aaKnown RBP14□□□□□ -0.17
RFFL-209ENST00000581265 ABT1Q9ULW3 272 aaKnown RBP14□□□□□ -0.17
RFFL-209ENST00000581265 ARFGEF2Q9Y6D5 1785 aa13.99□□□□□ -0.17
RFFL-209ENST00000581265 WDR33Q9C0J8 1336 aaKnown RBP13.99□□□□□ -0.17
RFFL-209ENST00000581265 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
RFFL-209ENST00000581265 ZNF277Q9NRM2 450 aaPredicted RBP13.99□□□□□ -0.17
RFFL-209ENST00000581265 ERBB4Q15303 1308 aa13.98□□□□□ -0.17
RFFL-209ENST00000581265 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms