RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 MEIS3Q99687 375 aa13.88□□□□□ -0.19
SKA2-206ENST00000581068 CCDC87Q9NVE4 849 aa13.88□□□□□ -0.19
SKA2-206ENST00000581068 CICQ96RK0 1608 aaPredicted RBP13.88□□□□□ -0.19
SKA2-206ENST00000581068 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
SKA2-206ENST00000581068 BTAF1O14981 1849 aa13.87□□□□□ -0.19
SKA2-206ENST00000581068 SBF2Q86WG5 1849 aa13.87□□□□□ -0.19
SKA2-206ENST00000581068 IGHDP01880 384 aa13.87□□□□□ -0.19
SKA2-206ENST00000581068 IL6STP40189 918 aaPredicted RBP13.87□□□□□ -0.19
SKA2-206ENST00000581068 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
SKA2-206ENST00000581068 TTLL7Q6ZT98 887 aa13.87□□□□□ -0.19
SKA2-206ENST00000581068 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
SKA2-206ENST00000581068 ZNF831Q5JPB2 1677 aa13.87□□□□□ -0.19
SKA2-206ENST00000581068 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
SKA2-206ENST00000581068 GNAI2P04899 355 aa13.86□□□□□ -0.19
SKA2-206ENST00000581068 CRKLP46109 303 aaKnown RBP13.86□□□□□ -0.19
SKA2-206ENST00000581068 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
SKA2-206ENST00000581068 KIF6Q6ZMV9 814 aa13.86□□□□□ -0.19
SKA2-206ENST00000581068 RPAP2Q8IXW5 612 aaPredicted RBP13.86□□□□□ -0.19
SKA2-206ENST00000581068 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
SKA2-206ENST00000581068 MYD88Q99836 296 aa13.86□□□□□ -0.19
SKA2-206ENST00000581068 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
SKA2-206ENST00000581068 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
SKA2-206ENST00000581068 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
SKA2-206ENST00000581068 ZBTB1Q9Y2K1 713 aa13.86□□□□□ -0.19
SKA2-206ENST00000581068 ZNF330Q9Y3S2 320 aaPredicted RBP13.86□□□□□ -0.19
SKA2-206ENST00000581068 IBTKQ9P2D0 1353 aaPredicted RBP13.85□□□□□ -0.19
SKA2-206ENST00000581068 UBTFL1P0CB47 393 aaPredicted RBP13.85□□□□□ -0.19
SKA2-206ENST00000581068 CCNL1Q9UK58 526 aaPredicted RBP13.85□□□□□ -0.19
SKA2-206ENST00000581068 TRIM37O94972 964 aa13.84□□□□□ -0.19
SKA2-206ENST00000581068 IGKV5-2P06315 115 aa13.84□□□□□ -0.19
SKA2-206ENST00000581068 EIF5P55010 431 aaKnown RBP13.84□□□□□ -0.19
SKA2-206ENST00000581068 CWF19L2Q2TBE0 894 aaKnown RBP13.84□□□□□ -0.19
SKA2-206ENST00000581068 RC3H1Q5TC82 1133 aaKnown RBP13.84□□□□□ -0.19
SKA2-206ENST00000581068 ILDR2Q71H61 639 aa13.84□□□□□ -0.19
SKA2-206ENST00000581068 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
SKA2-206ENST00000581068 LINC00116Q8NCU8 138 aa13.84□□□□□ -0.19
SKA2-206ENST00000581068 ZBTB3Q9H5J0 574 aa13.84□□□□□ -0.19
SKA2-206ENST00000581068 C9orf78Q9NZ63 289 aaPredicted RBP13.84□□□□□ -0.19
SKA2-206ENST00000581068 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
SKA2-206ENST00000581068 HMGB2P26583 209 aaKnown RBP13.83□□□□□ -0.2
SKA2-206ENST00000581068 ARXQ96QS3 562 aa13.83□□□□□ -0.2
SKA2-206ENST00000581068 MAP3K15Q6ZN16 1313 aa13.83□□□□□ -0.2
SKA2-206ENST00000581068 CNTNAP4Q9C0A0 1308 aa13.83□□□□□ -0.2
SKA2-206ENST00000581068 RREB1Q92766 1687 aa13.82□□□□□ -0.2
SKA2-206ENST00000581068 A0A087WZG4 1122 aa13.82□□□□□ -0.2
SKA2-206ENST00000581068 ERVV-1B6SEH8 477 aa13.82□□□□□ -0.2
SKA2-206ENST00000581068 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
SKA2-206ENST00000581068 GCKRQ14397 625 aa13.82□□□□□ -0.2
SKA2-206ENST00000581068 CEP85Q6P2H3 762 aa13.82□□□□□ -0.2
SKA2-206ENST00000581068 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
SKA2-206ENST00000581068 UTYO14607 1347 aa13.82□□□□□ -0.2
SKA2-206ENST00000581068 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 GRM8O00222 908 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 HMMRO75330 724 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
SKA2-206ENST00000581068 KCNQ4P56696 695 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 ATP8B2P98198 1209 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
SKA2-206ENST00000581068 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 LRRFIP2Q9Y608 721 aaKnown RBP13.81□□□□□ -0.2
SKA2-206ENST00000581068 LY75O60449 1722 aa13.81□□□□□ -0.2
SKA2-206ENST00000581068 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
SKA2-206ENST00000581068 RPS6KA4O75676 772 aa13.8□□□□□ -0.2
SKA2-206ENST00000581068 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
SKA2-206ENST00000581068 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
SKA2-206ENST00000581068 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
SKA2-206ENST00000581068 ISCA1Q9BUE6 129 aa13.8□□□□□ -0.2
SKA2-206ENST00000581068 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
SKA2-206ENST00000581068 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
SKA2-206ENST00000581068 NUP188Q5SRE5 1749 aa13.79□□□□□ -0.2
SKA2-206ENST00000581068 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
SKA2-206ENST00000581068 H7C1W4 665 aa13.78□□□□□ -0.2
SKA2-206ENST00000581068 PLSCR1O15162 318 aa13.78□□□□□ -0.2
SKA2-206ENST00000581068 APBA3O96018 575 aa13.78□□□□□ -0.2
SKA2-206ENST00000581068 HLFQ16534 295 aa13.78□□□□□ -0.2
SKA2-206ENST00000581068 COL15A1P39059 1388 aa13.78□□□□□ -0.2
SKA2-206ENST00000581068 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.21
SKA2-206ENST00000581068 SUCLG2Q96I99 432 aa13.77□□□□□ -0.21
SKA2-206ENST00000581068 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
SKA2-206ENST00000581068 PDZRN3Q9UPQ7 1066 aa13.77□□□□□ -0.21
SKA2-206ENST00000581068 RTCBQ9Y3I0 505 aaKnown RBP13.77□□□□□ -0.21
SKA2-206ENST00000581068 RGL2O15211 777 aa13.76□□□□□ -0.21
SKA2-206ENST00000581068 GNPATO15228 680 aa13.76□□□□□ -0.21
SKA2-206ENST00000581068 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
SKA2-206ENST00000581068 TXNRD1Q16881 649 aa13.76□□□□□ -0.21
SKA2-206ENST00000581068 AK7Q96M32 723 aa13.76□□□□□ -0.21
SKA2-206ENST00000581068 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
SKA2-206ENST00000581068 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
SKA2-206ENST00000581068 CASP7P55210 303 aa13.75□□□□□ -0.21
SKA2-206ENST00000581068 MTX1Q13505 466 aa13.75□□□□□ -0.21
SKA2-206ENST00000581068 CLEC4GQ6UXB4 293 aa13.75□□□□□ -0.21
SKA2-206ENST00000581068 UBE3BQ7Z3V4 1068 aa13.75□□□□□ -0.21
SKA2-206ENST00000581068 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
SKA2-206ENST00000581068 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
SKA2-206ENST00000581068 SSH3Q8TE77 659 aa13.75□□□□□ -0.21
SKA2-206ENST00000581068 AFDNP55196 1824 aaKnown RBP13.75□□□□□ -0.21
SKA2-206ENST00000581068 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms