RNA–Protein interactions for RNA: ENST00000579671.5

NEK8-204, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-204ENST00000579671 L3MBTL3Q96JM7 780 aaPredicted RBP8.87□□□□□ -0.99
NEK8-204ENST00000579671 PRDM10Q9NQV6 1147 aa8.87□□□□□ -0.99
NEK8-204ENST00000579671 CNTNAP1P78357 1384 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 KIF7Q2M1P5 1343 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 CCDC88AQ3V6T2 1871 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 TMEM88BA6NKF7 163 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 POTEIP0CG38 1075 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 POTEJP0CG39 1038 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 NPR1P16066 1061 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 CTCFP49711 727 aaPredicted RBP8.86□□□□□ -0.99
NEK8-204ENST00000579671 RTKN2Q8IZC4 609 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 TAF1DQ9H5J8 278 aaPredicted RBP8.86□□□□□ -0.99
NEK8-204ENST00000579671 UBR2Q8IWV8 1755 aa8.86□□□□□ -0.99
NEK8-204ENST00000579671 RGL2O15211 777 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
NEK8-204ENST00000579671 FKBP4Q02790 459 aaKnown RBP eCLIP8.85□□□□□ -0.99
NEK8-204ENST00000579671 EAPPQ56P03 285 aaPredicted RBP8.85□□□□□ -0.99
NEK8-204ENST00000579671 TPTE2Q6XPS3 522 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 PNMA8AQ86V59 439 aaPredicted RBP8.85□□□□□ -0.99
NEK8-204ENST00000579671 CFAP53Q96M91 514 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 HACL1Q9UJ83 578 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 CLEC11AQ9Y240 323 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 FER1L6Q2WGJ9 1857 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 CEMIPQ8WUJ3 1361 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 NPC1L1Q9UHC9 1359 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 SCN7AQ01118 1682 aa8.85□□□□□ -0.99
NEK8-204ENST00000579671 PASKQ96RG2 1323 aa8.84□□□□□ -0.99
NEK8-204ENST00000579671 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -0.99
NEK8-204ENST00000579671 FOXN1O15353 648 aa8.84□□□□□ -0.99
NEK8-204ENST00000579671 SNRPA1P09661 255 aaKnown RBP8.84□□□□□ -0.99
NEK8-204ENST00000579671 ANKRD31Q8N7Z5 1873 aa8.84□□□□□ -0.99
NEK8-204ENST00000579671 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
NEK8-204ENST00000579671 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
NEK8-204ENST00000579671 RTF1Q92541 710 aaKnown RBP8.84□□□□□ -0.99
NEK8-204ENST00000579671 ZNF277Q9NRM2 450 aaPredicted RBP8.84□□□□□ -0.99
NEK8-204ENST00000579671 SLX4Q8IY92 1834 aa8.83□□□□□ -1
NEK8-204ENST00000579671 KLRG2A4D1S0 409 aaPredicted RBP8.83□□□□□ -1
NEK8-204ENST00000579671 KCNQ3O43525 872 aa8.83□□□□□ -1
NEK8-204ENST00000579671 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
NEK8-204ENST00000579671 ALDH1B1P30837 517 aa8.83□□□□□ -1
NEK8-204ENST00000579671 PRKAR2BP31323 418 aa8.83□□□□□ -1
NEK8-204ENST00000579671 EPHX2P34913 555 aa8.83□□□□□ -1
NEK8-204ENST00000579671 VEGFBP49765 207 aa8.83□□□□□ -1
NEK8-204ENST00000579671 JDP2Q8WYK2 163 aa8.83□□□□□ -1
NEK8-204ENST00000579671 NIP7Q9Y221 180 aaKnown RBP eCLIP8.83□□□□□ -1
NEK8-204ENST00000579671 NUDCQ9Y266 331 aa8.83□□□□□ -1
NEK8-204ENST00000579671 USP16Q9Y5T5 823 aa8.83□□□□□ -1
NEK8-204ENST00000579671 COL11A2P13942 1736 aaPredicted RBP8.83□□□□□ -1
NEK8-204ENST00000579671 VIRMAQ69YN4 1812 aaKnown RBP8.82□□□□□ -1
NEK8-204ENST00000579671 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
NEK8-204ENST00000579671 IARSP41252 1262 aaKnown RBP8.82□□□□□ -1
NEK8-204ENST00000579671 PIP4K2AP48426 406 aaPredicted RBP8.82□□□□□ -1
NEK8-204ENST00000579671 MAP2K1Q02750 393 aaPredicted RBP8.82□□□□□ -1
NEK8-204ENST00000579671 CNGB1Q14028 1251 aaPredicted RBP8.82□□□□□ -1
NEK8-204ENST00000579671 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
NEK8-204ENST00000579671 CNTROBQ8N137 903 aa8.82□□□□□ -1
NEK8-204ENST00000579671 GPC2Q8N158 579 aa8.82□□□□□ -1
NEK8-204ENST00000579671 WBP1LQ9NX94 342 aa8.82□□□□□ -1
NEK8-204ENST00000579671 COL3A1P02461 1466 aaPredicted RBP8.82□□□□□ -1
NEK8-204ENST00000579671 SCN4AP35499 1836 aa8.82□□□□□ -1
NEK8-204ENST00000579671 ZNF541Q9H0D2 1346 aa8.81□□□□□ -1
NEK8-204ENST00000579671 RASSF10A6NK89 507 aa8.81□□□□□ -1
NEK8-204ENST00000579671 FAM177BA6PVY3 158 aa8.81□□□□□ -1
NEK8-204ENST00000579671 FZD9O00144 591 aa8.81□□□□□ -1
NEK8-204ENST00000579671 LMOD1P29536 600 aaPredicted RBP8.81□□□□□ -1
NEK8-204ENST00000579671 LBX1P52954 281 aa8.81□□□□□ -1
NEK8-204ENST00000579671 EIF6P56537 245 aaKnown RBP8.81□□□□□ -1
NEK8-204ENST00000579671 DEFB115Q30KQ5 88 aa8.81□□□□□ -1
NEK8-204ENST00000579671 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
NEK8-204ENST00000579671 SYNE4Q8N205 404 aa8.81□□□□□ -1
NEK8-204ENST00000579671 PHACTR3Q96KR7 559 aa8.81□□□□□ -1
NEK8-204ENST00000579671 NYXQ9GZU5 481 aa8.81□□□□□ -1
NEK8-204ENST00000579671 RSPH6AQ9H0K4 717 aa8.81□□□□□ -1
NEK8-204ENST00000579671 ABT1Q9ULW3 272 aaKnown RBP8.81□□□□□ -1
NEK8-204ENST00000579671 RNF123Q5XPI4 1314 aa8.8□□□□□ -1
NEK8-204ENST00000579671 HTATSF1O43719 755 aaKnown RBP8.8□□□□□ -1
NEK8-204ENST00000579671 U2AF1L5P0DN76 240 aaPredicted RBP8.8□□□□□ -1
NEK8-204ENST00000579671 U2AF1Q01081 240 aaKnown RBP eCLIP8.8□□□□□ -1
NEK8-204ENST00000579671 MAP1SQ66K74 1059 aaPredicted RBP8.8□□□□□ -1
NEK8-204ENST00000579671 PSMD1Q99460 953 aa8.8□□□□□ -1
NEK8-204ENST00000579671 BEGAINQ9BUH8 593 aa8.8□□□□□ -1
NEK8-204ENST00000579671 SIPA1L3O60292 1781 aaPredicted RBP8.79□□□□□ -1
NEK8-204ENST00000579671 ARFGEF2Q9Y6D5 1785 aa8.79□□□□□ -1
NEK8-204ENST00000579671 PRAMEF22A3QJZ6 481 aa8.79□□□□□ -1
NEK8-204ENST00000579671 NBPF26B4DH59 902 aa8.79□□□□□ -1
NEK8-204ENST00000579671 NEFMP07197 916 aa8.79□□□□□ -1
NEK8-204ENST00000579671 ECE1P42892 770 aa8.79□□□□□ -1
NEK8-204ENST00000579671 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
NEK8-204ENST00000579671 NBPF10Q6P3W6 841 aaKnown RBP8.79□□□□□ -1
NEK8-204ENST00000579671 OLFM4Q6UX06 510 aa8.79□□□□□ -1
NEK8-204ENST00000579671 MCM10Q7L590 875 aa8.79□□□□□ -1
NEK8-204ENST00000579671 NBPF15Q8N660 670 aa8.79□□□□□ -1
NEK8-204ENST00000579671 RPGRQ92834 1020 aaKnown RBP8.79□□□□□ -1
NEK8-204ENST00000579671 TMX4Q9H1E5 349 aaPredicted RBP8.79□□□□□ -1
NEK8-204ENST00000579671 GJA3Q9Y6H8 435 aa8.79□□□□□ -1
NEK8-204ENST00000579671 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
NEK8-204ENST00000579671 BCORQ6W2J9 1755 aa8.78□□□□□ -1
NEK8-204ENST00000579671 ERVV-1B6SEH8 477 aa8.78□□□□□ -1
NEK8-204ENST00000579671 HSPA8P11142 646 aaKnown RBP8.78□□□□□ -1
NEK8-204ENST00000579671 HLFQ16534 295 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms