RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 C7orf43Q8WVR3 580 aa14.24□□□□□ -0.13
CSNK1D-210ENST00000579308 CNKSR1Q969H4 720 aa14.24□□□□□ -0.13
CSNK1D-210ENST00000579308 KLRG2A4D1S0 409 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-210ENST00000579308 RGL2O15211 777 aa14.23□□□□□ -0.13
CSNK1D-210ENST00000579308 DCTN1Q14203 1278 aa14.23□□□□□ -0.13
CSNK1D-210ENST00000579308 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-210ENST00000579308 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-210ENST00000579308 ZNF219Q9P2Y4 722 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-210ENST00000579308 SIPA1L3O60292 1781 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-210ENST00000579308 ST5P78524 1137 aa14.22□□□□□ -0.13
CSNK1D-210ENST00000579308 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-210ENST00000579308 ERFEQ4G0M1 354 aa14.22□□□□□ -0.13
CSNK1D-210ENST00000579308 DPY19L2Q6NUT2 758 aa14.22□□□□□ -0.13
CSNK1D-210ENST00000579308 MASTLQ96GX5 879 aa14.22□□□□□ -0.13
CSNK1D-210ENST00000579308 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
CSNK1D-210ENST00000579308 VIRMAQ69YN4 1812 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-210ENST00000579308 PRPF40BQ6NWY9 871 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-210ENST00000579308 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-210ENST00000579308 TAOK3Q9H2K8 898 aa14.2□□□□□ -0.14
CSNK1D-210ENST00000579308 SCN7AQ01118 1682 aa14.2□□□□□ -0.14
CSNK1D-210ENST00000579308 ANKRD31Q8N7Z5 1873 aa14.19□□□□□ -0.14
CSNK1D-210ENST00000579308 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
CSNK1D-210ENST00000579308 MIS18AQ9NYP9 233 aa14.19□□□□□ -0.14
CSNK1D-210ENST00000579308 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
CSNK1D-210ENST00000579308 TNRC6CQ9HCJ0 1690 aaKnown RBP14.19□□□□□ -0.14
CSNK1D-210ENST00000579308 NPHP1O15259 732 aa14.18□□□□□ -0.14
CSNK1D-210ENST00000579308 NPR1P16066 1061 aa14.18□□□□□ -0.14
CSNK1D-210ENST00000579308 HLFQ16534 295 aa14.18□□□□□ -0.14
CSNK1D-210ENST00000579308 TPTE2Q6XPS3 522 aa14.18□□□□□ -0.14
CSNK1D-210ENST00000579308 PLEKHF1Q96S99 279 aa14.18□□□□□ -0.14
CSNK1D-210ENST00000579308 NIP7Q9Y221 180 aaKnown RBP eCLIP14.18□□□□□ -0.14
CSNK1D-210ENST00000579308 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
CSNK1D-210ENST00000579308 DDNO94850 711 aaPredicted RBP14.17□□□□□ -0.14
CSNK1D-210ENST00000579308 COL13A1Q5TAT6 717 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-210ENST00000579308 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-210ENST00000579308 ERVV-1B6SEH8 477 aa14.15□□□□□ -0.14
CSNK1D-210ENST00000579308 CCDC93Q567U6 631 aa14.15□□□□□ -0.14
CSNK1D-210ENST00000579308 PNISRQ8TF01 805 aaKnown RBP14.15□□□□□ -0.14
CSNK1D-210ENST00000579308 L3MBTL3Q96JM7 780 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-210ENST00000579308 SLX4Q8IY92 1834 aa14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 FKBP4Q02790 459 aaKnown RBP eCLIP14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 FER1L6Q2WGJ9 1857 aa14.14□□□□□ -0.15
CSNK1D-210ENST00000579308 NFE2L2Q16236 605 aa14.13□□□□□ -0.15
CSNK1D-210ENST00000579308 RTKN2Q8IZC4 609 aa14.13□□□□□ -0.15
CSNK1D-210ENST00000579308 ZNF277Q9NRM2 450 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-210ENST00000579308 BCORQ6W2J9 1755 aa14.12□□□□□ -0.15
CSNK1D-210ENST00000579308 FAM177BA6PVY3 158 aa14.12□□□□□ -0.15
CSNK1D-210ENST00000579308 ALDH1B1P30837 517 aa14.12□□□□□ -0.15
CSNK1D-210ENST00000579308 THUMPD2Q9BTF0 503 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-210ENST00000579308 TAF1DQ9H5J8 278 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-210ENST00000579308 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
CSNK1D-210ENST00000579308 MAP3K15Q6ZN16 1313 aa14.12□□□□□ -0.15
CSNK1D-210ENST00000579308 IQCA1LA6NCM1 817 aa14.11□□□□□ -0.15
CSNK1D-210ENST00000579308 FZD9O00144 591 aa14.11□□□□□ -0.15
CSNK1D-210ENST00000579308 TTLL7Q6ZT98 887 aa14.11□□□□□ -0.15
CSNK1D-210ENST00000579308 TIAM2Q8IVF5 1701 aa14.11□□□□□ -0.15
CSNK1D-210ENST00000579308 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
CSNK1D-210ENST00000579308 NYXQ9GZU5 481 aa14.11□□□□□ -0.15
CSNK1D-210ENST00000579308 SNED1Q8TER0 1413 aa14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 NEFMP07197 916 aa14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 HOXA10P31260 410 aaPredicted RBP14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 LDHDQ86WU2 507 aa14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 NUTM1Q86Y26 1132 aa14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 SYNE4Q8N205 404 aa14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 RRP7AQ9Y3A4 280 aaKnown RBP14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 PASKQ96RG2 1323 aa14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 ZNF541Q9H0D2 1346 aa14.1□□□□□ -0.15
CSNK1D-210ENST00000579308 ITGBL1O95965 494 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 HSPA1AP0DMV8 641 aaKnown RBP14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 HSPA1BP0DMV9 641 aaKnown RBP14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 SUSD4Q5VX71 490 aa14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 LRP10Q7Z4F1 713 aa14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 ZNF34Q8IZ26 560 aa14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 PSMD1Q99460 953 aa14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 CCDC88AQ3V6T2 1871 aa14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 UBN2Q6ZU65 1347 aa14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 ABCC12Q96J65 1359 aa14.09□□□□□ -0.15
CSNK1D-210ENST00000579308 MYL6BP14649 208 aa14.08□□□□□ -0.16
CSNK1D-210ENST00000579308 IARSP41252 1262 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-210ENST00000579308 PDIA6Q15084 440 aa14.08□□□□□ -0.16
CSNK1D-210ENST00000579308 PNNQ9H307 717 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-210ENST00000579308 DICER1Q9UPY3 1922 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 GPTP24298 496 aa14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 CC2D2BQ6DHV5 1058 aa14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 GIGYF2Q6Y7W6 1299 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 KIF6Q6ZMV9 814 aa14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 ZBTB3Q9H5J0 574 aa14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 HACL1Q9UJ83 578 aa14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 IBTKQ9P2D0 1353 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-210ENST00000579308 NTSR2O95665 410 aa14.06□□□□□ -0.16
CSNK1D-210ENST00000579308 EPHX2P34913 555 aa14.06□□□□□ -0.16
CSNK1D-210ENST00000579308 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms