RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, human

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THRA-208	ENST00000578218	GLTPD2	A6NH11	291 aa		33.22	■■■□□ 2.91
THRA-208	ENST00000578218	C21orf2	O43822	256 aa		33.22	■■■□□ 2.91
THRA-208	ENST00000578218	DCTN1	Q14203	1278 aa		33.22	■■■□□ 2.91
THRA-208	ENST00000578218	SMC1B	Q8NDV3	1235 aa		33.22	■■■□□ 2.91
THRA-208	ENST00000578218	ZNF652	Q9Y2D9	606 aa		33.22	■■■□□ 2.91
THRA-208	ENST00000578218	SLX4	Q8IY92	1834 aa		33.21	■■■□□ 2.91
THRA-208	ENST00000578218	DNAJC5G	Q8N7S2	189 aa		33.19	■■■□□ 2.9
THRA-208	ENST00000578218	KDM3B	Q7LBC6	1761 aa		33.19	■■■□□ 2.9
THRA-208	ENST00000578218	HTATSF1	O43719	755 aa	Known RBP	33.18	■■■□□ 2.9
THRA-208	ENST00000578218	NEFM	P07197	916 aa		33.18	■■■□□ 2.9
THRA-208	ENST00000578218	HTRA3	P83110	453 aa		33.18	■■■□□ 2.9
THRA-208	ENST00000578218	CNKSR1	Q969H4	720 aa		33.18	■■■□□ 2.9
THRA-208	ENST00000578218	VEGFA	P15692	232 aa	Predicted RBP	33.17	■■■□□ 2.9
THRA-208	ENST00000578218	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.17	■■■□□ 2.9
THRA-208	ENST00000578218	STYK1	Q6J9G0	422 aa		33.16	■■■□□ 2.9
THRA-208	ENST00000578218	CLEC4G	Q6UXB4	293 aa		33.15	■■■□□ 2.9
THRA-208	ENST00000578218	TAOK3	Q9H2K8	898 aa		33.15	■■■□□ 2.9
THRA-208	ENST00000578218	ERFE	Q4G0M1	354 aa		33.14	■■■□□ 2.9
THRA-208	ENST00000578218	PRPF40B	Q6NWY9	871 aa	Known RBP	33.14	■■■□□ 2.9
THRA-208	ENST00000578218	MASTL	Q96GX5	879 aa		33.14	■■■□□ 2.9
THRA-208	ENST00000578218	SRGN	P10124	158 aa		33.13	■■■□□ 2.89
THRA-208	ENST00000578218	KLRG1	Q96E93	195 aa		33.13	■■■□□ 2.89
THRA-208	ENST00000578218	LTBP3	Q9NS15	1303 aa		33.12	■■■□□ 2.89
THRA-208	ENST00000578218	TAF7	Q15545	349 aa	Predicted RBP	33.12	■■■□□ 2.89
THRA-208	ENST00000578218	SOGA3	Q5TF21	947 aa		33.12	■■■□□ 2.89
THRA-208	ENST00000578218	DPY19L2	Q6NUT2	758 aa		33.12	■■■□□ 2.89
THRA-208	ENST00000578218	NBPF26	B4DH59	902 aa		33.1	■■■□□ 2.89
THRA-208	ENST00000578218	NBPF10	Q6P3W6	841 aa	Known RBP	33.1	■■■□□ 2.89
THRA-208	ENST00000578218	NBPF15	Q8N660	670 aa		33.1	■■■□□ 2.89
THRA-208	ENST00000578218	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.1	■■■□□ 2.89
THRA-208	ENST00000578218	MIS18A	Q9NYP9	233 aa		33.08	■■■□□ 2.89
THRA-208	ENST00000578218	FAM177B	A6PVY3	158 aa		33.06	■■■□□ 2.88
THRA-208	ENST00000578218	RGL2	O15211	777 aa		33.06	■■■□□ 2.88
THRA-208	ENST00000578218	TPTE2	Q6XPS3	522 aa		33.05	■■■□□ 2.88
THRA-208	ENST00000578218	PNISR	Q8TF01	805 aa	Known RBP	33.05	■■■□□ 2.88
THRA-208	ENST00000578218	NPR1	P16066	1061 aa		33.04	■■■□□ 2.88
THRA-208	ENST00000578218	NUP98	P52948	1817 aa		33.04	■■■□□ 2.88
THRA-208	ENST00000578218	MAPK8IP3	Q9UPT6	1336 aa		33.03	■■■□□ 2.88
THRA-208	ENST00000578218	CCDC93	Q567U6	631 aa		33.03	■■■□□ 2.88
THRA-208	ENST00000578218	POTEC	B2RU33	542 aa		33.01	■■■□□ 2.87
THRA-208	ENST00000578218	NFE2L2	Q16236	605 aa		33.01	■■■□□ 2.87
THRA-208	ENST00000578218	JMY	Q8N9B5	988 aa		33.01	■■■□□ 2.87
THRA-208	ENST00000578218	GTF2E1	P29083	439 aa	Predicted RBP	33	■■■□□ 2.87
THRA-208	ENST00000578218	HLF	Q16534	295 aa		33	■■■□□ 2.87
THRA-208	ENST00000578218	NGEF	Q8N5V2	710 aa		33	■■■□□ 2.87
THRA-208	ENST00000578218	PLEKHF1	Q96S99	279 aa		32.99	■■■□□ 2.87
THRA-208	ENST00000578218	KIF6	Q6ZMV9	814 aa		32.98	■■■□□ 2.87
THRA-208	ENST00000578218	THUMPD2	Q9BTF0	503 aa	Known RBP	32.98	■■■□□ 2.87
THRA-208	ENST00000578218	PNN	Q9H307	717 aa	Known RBP	32.98	■■■□□ 2.87
THRA-208	ENST00000578218	DDN	O94850	711 aa	Predicted RBP	32.97	■■■□□ 2.87
THRA-208	ENST00000578218	SCN4A	P35499	1836 aa		32.96	■■■□□ 2.87
THRA-208	ENST00000578218	KLRG2	A4D1S0	409 aa	Predicted RBP	32.96	■■■□□ 2.87
THRA-208	ENST00000578218	ABCC12	Q96J65	1359 aa		32.96	■■■□□ 2.87
THRA-208	ENST00000578218	EIF4A1	P60842	406 aa	Known RBP	32.95	■■■□□ 2.87
THRA-208	ENST00000578218	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.95	■■■□□ 2.87
THRA-208	ENST00000578218	C7orf43	Q8WVR3	580 aa		32.95	■■■□□ 2.87
THRA-208	ENST00000578218	NYX	Q9GZU5	481 aa		32.95	■■■□□ 2.87
THRA-208	ENST00000578218	RRP7A	Q9Y3A4	280 aa	Known RBP	32.95	■■■□□ 2.87
THRA-208	ENST00000578218	MAP3K15	Q6ZN16	1313 aa		32.95	■■■□□ 2.86
THRA-208	ENST00000578218	MYL6B	P14649	208 aa		32.93	■■■□□ 2.86
THRA-208	ENST00000578218	ERVV-1	B6SEH8	477 aa		32.92	■■■□□ 2.86
THRA-208	ENST00000578218	IQCA1L	A6NCM1	817 aa		32.91	■■■□□ 2.86
THRA-208	ENST00000578218	ALDH1B1	P30837	517 aa		32.91	■■■□□ 2.86
THRA-208	ENST00000578218	CHADL	Q6NUI6	762 aa		32.91	■■■□□ 2.86
THRA-208	ENST00000578218	OLFM4	Q6UX06	510 aa		32.91	■■■□□ 2.86
THRA-208	ENST00000578218	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.91	■■■□□ 2.86
THRA-208	ENST00000578218	TTLL7	Q6ZT98	887 aa		32.9	■■■□□ 2.86
THRA-208	ENST00000578218	NUTM1	Q86Y26	1132 aa		32.9	■■■□□ 2.86
THRA-208	ENST00000578218	RTKN2	Q8IZC4	609 aa		32.9	■■■□□ 2.86
THRA-208	ENST00000578218	ZBTB3	Q9H5J0	574 aa		32.9	■■■□□ 2.86
THRA-208	ENST00000578218	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.9	■■■□□ 2.86
THRA-208	ENST00000578218	RIC1	Q4ADV7	1423 aa		32.88	■■■□□ 2.85
THRA-208	ENST00000578218	TSPYL4	Q9UJ04	414 aa		32.88	■■■□□ 2.85
THRA-208	ENST00000578218	PCNT	O95613	3336 aa		32.87	■■■□□ 2.85
THRA-208	ENST00000578218	ZNF541	Q9H0D2	1346 aa		32.87	■■■□□ 2.85
THRA-208	ENST00000578218	POTEI	P0CG38	1075 aa		32.87	■■■□□ 2.85
THRA-208	ENST00000578218	POTEJ	P0CG39	1038 aa		32.87	■■■□□ 2.85
THRA-208	ENST00000578218	GPT	P24298	496 aa		32.87	■■■□□ 2.85
THRA-208	ENST00000578218	ERBB4	Q15303	1308 aa		32.86	■■■□□ 2.85
THRA-208	ENST00000578218	UBN2	Q6ZU65	1347 aa		32.86	■■■□□ 2.85
THRA-208	ENST00000578218	RPGR	Q92834	1020 aa	Known RBP	32.86	■■■□□ 2.85
THRA-208	ENST00000578218	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.86	■■■□□ 2.85
THRA-208	ENST00000578218	CRY2	Q49AN0	593 aa		32.85	■■■□□ 2.85
THRA-208	ENST00000578218	IARS	P41252	1262 aa	Known RBP	32.84	■■■□□ 2.85
THRA-208	ENST00000578218	ANKRD36C	Q5JPF3	1778 aa		32.83	■■■□□ 2.85
THRA-208	ENST00000578218	LDHD	Q86WU2	507 aa		32.82	■■■□□ 2.84
THRA-208	ENST00000578218	SYNE4	Q8N205	404 aa		32.82	■■■□□ 2.84
THRA-208	ENST00000578218	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.82	■■■□□ 2.84
THRA-208	ENST00000578218	RIPK4	P57078	832 aa		32.81	■■■□□ 2.84
THRA-208	ENST00000578218	SNED1	Q8TER0	1413 aa		32.81	■■■□□ 2.84
THRA-208	ENST00000578218	CREBZF	Q9NS37	354 aa		32.81	■■■□□ 2.84
THRA-208	ENST00000578218	LMOD3	Q0VAK6	560 aa		32.8	■■■□□ 2.84
THRA-208	ENST00000578218	RALBP1	Q15311	655 aa		32.8	■■■□□ 2.84
THRA-208	ENST00000578218	HSPA1A	P0DMV8	641 aa	Known RBP	32.79	■■■□□ 2.84
THRA-208	ENST00000578218	HSPA1B	P0DMV9	641 aa	Known RBP	32.79	■■■□□ 2.84
THRA-208	ENST00000578218	EAPP	Q56P03	285 aa	Predicted RBP	32.79	■■■□□ 2.84
THRA-208	ENST00000578218	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.79	■■■□□ 2.84
THRA-208	ENST00000578218	SUSD4	Q5VX71	490 aa		32.79	■■■□□ 2.84
THRA-208	ENST00000578218	PSMD1	Q99460	953 aa		32.79	■■■□□ 2.84
THRA-208	ENST00000578218	ADAMTSL1	Q8N6G6	1762 aa		32.78	■■■□□ 2.84

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