RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 RBM10P98175 930 aaKnown RBP16.99■□□□□ 0.31
RNF43-202ENST00000577625 CDCA7Q9BWT1 371 aaPredicted RBP16.99■□□□□ 0.31
RNF43-202ENST00000577625 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
RNF43-202ENST00000577625 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
RNF43-202ENST00000577625 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.98■□□□□ 0.31
RNF43-202ENST00000577625 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
RNF43-202ENST00000577625 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
RNF43-202ENST00000577625 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
RNF43-202ENST00000577625 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
RNF43-202ENST00000577625 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
RNF43-202ENST00000577625 APBB1O00213 710 aa16.97■□□□□ 0.31
RNF43-202ENST00000577625 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
RNF43-202ENST00000577625 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
RNF43-202ENST00000577625 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
RNF43-202ENST00000577625 ASAP1Q9ULH1 1129 aa16.97■□□□□ 0.31
RNF43-202ENST00000577625 EXOC6BQ9Y2D4 811 aa16.97■□□□□ 0.31
RNF43-202ENST00000577625 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 POLA2Q14181 598 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 BECN1Q14457 450 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 UTYO14607 1347 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 ANKRD13DQ6ZTN6 518 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
RNF43-202ENST00000577625 METTL22Q9BUU2 404 aaPredicted RBP16.96■□□□□ 0.31
RNF43-202ENST00000577625 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.31
RNF43-202ENST00000577625 PRDM4Q9UKN5 801 aa16.96■□□□□ 0.31
RNF43-202ENST00000577625 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.3
RNF43-202ENST00000577625 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
RNF43-202ENST00000577625 GRM8O00222 908 aa16.95■□□□□ 0.3
RNF43-202ENST00000577625 NEURL1BA8MQ27 555 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 A1BGP04217 495 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 DDB1Q16531 1140 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 TJP1Q07157 1748 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 MTX1Q13505 466 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 MYD88Q99836 296 aa16.94■□□□□ 0.3
RNF43-202ENST00000577625 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
RNF43-202ENST00000577625 ESPNB1AK53 854 aa16.93■□□□□ 0.3
RNF43-202ENST00000577625 UNC5CLQ8IV45 518 aa16.93■□□□□ 0.3
RNF43-202ENST00000577625 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
RNF43-202ENST00000577625 CERKQ8TCT0 537 aa16.93■□□□□ 0.3
RNF43-202ENST00000577625 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
RNF43-202ENST00000577625 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
RNF43-202ENST00000577625 TTC22Q5TAA0 569 aa16.92■□□□□ 0.3
RNF43-202ENST00000577625 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
RNF43-202ENST00000577625 HDAC5Q9UQL6 1122 aa16.92■□□□□ 0.3
RNF43-202ENST00000577625 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
RNF43-202ENST00000577625 MRE11P49959 708 aa16.92■□□□□ 0.3
RNF43-202ENST00000577625 GCKRQ14397 625 aa16.92■□□□□ 0.3
RNF43-202ENST00000577625 PANK2Q9BZ23 570 aa16.92■□□□□ 0.3
RNF43-202ENST00000577625 KAZALD1Q96I82 304 aa16.91■□□□□ 0.3
RNF43-202ENST00000577625 SUCLG2Q96I99 432 aa16.91■□□□□ 0.3
RNF43-202ENST00000577625 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
RNF43-202ENST00000577625 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
RNF43-202ENST00000577625 DNAJC10Q8IXB1 793 aa16.91■□□□□ 0.3
RNF43-202ENST00000577625 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
RNF43-202ENST00000577625 A0A0U1RQG5 324 aaPredicted RBP16.9■□□□□ 0.3
RNF43-202ENST00000577625 PRIM1P49642 420 aaKnown RBP16.9■□□□□ 0.3
RNF43-202ENST00000577625 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
RNF43-202ENST00000577625 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
RNF43-202ENST00000577625 OSBPL3Q9H4L5 887 aa16.9■□□□□ 0.3
RNF43-202ENST00000577625 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
RNF43-202ENST00000577625 MFAP1P55081 439 aaKnown RBP16.89■□□□□ 0.3
RNF43-202ENST00000577625 FGD1P98174 961 aa16.89■□□□□ 0.3
RNF43-202ENST00000577625 SYTL4Q96C24 671 aaPredicted RBP16.89■□□□□ 0.3
RNF43-202ENST00000577625 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.3
RNF43-202ENST00000577625 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.3
RNF43-202ENST00000577625 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.3
RNF43-202ENST00000577625 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.3
RNF43-202ENST00000577625 VPS72Q15906 364 aa16.89■□□□□ 0.29
RNF43-202ENST00000577625 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
RNF43-202ENST00000577625 SURF6O75683 361 aaKnown RBP16.88■□□□□ 0.29
RNF43-202ENST00000577625 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
RNF43-202ENST00000577625 BICC1Q9H694 974 aaKnown RBP16.88■□□□□ 0.29
RNF43-202ENST00000577625 CDC45O75419 566 aa16.88■□□□□ 0.29
RNF43-202ENST00000577625 PDE1AP54750 535 aa16.88■□□□□ 0.29
RNF43-202ENST00000577625 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
RNF43-202ENST00000577625 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
RNF43-202ENST00000577625 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
RNF43-202ENST00000577625 TBC1D9Q6ZT07 1266 aa16.87■□□□□ 0.29
RNF43-202ENST00000577625 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
RNF43-202ENST00000577625 CICQ96RK0 1608 aaPredicted RBP16.87■□□□□ 0.29
RNF43-202ENST00000577625 COL15A1P39059 1388 aa16.87■□□□□ 0.29
RNF43-202ENST00000577625 ARXQ96QS3 562 aa16.87■□□□□ 0.29
RNF43-202ENST00000577625 STARD3NLO95772 234 aa16.86■□□□□ 0.29
RNF43-202ENST00000577625 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
RNF43-202ENST00000577625 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
RNF43-202ENST00000577625 ANKRD36CQ5JPF3 1778 aa16.86■□□□□ 0.29
RNF43-202ENST00000577625 AK9Q5TCS8 1911 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 RHPN1Q8TCX5 695 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 CYP19A1P11511 503 aaPredicted RBP16.85■□□□□ 0.29
RNF43-202ENST00000577625 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 EPHA10Q5JZY3 1008 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 KIF1BPQ96EK5 621 aa16.85■□□□□ 0.29
RNF43-202ENST00000577625 ACSBG1Q96GR2 724 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms