RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	AXIN2	Q9Y2T1	843 aa		17.81	■□□□□ 0.44
PRPF8-216	ENST00000577001	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	17.81	■□□□□ 0.44	2e-6	■□□□□ 9.1
PRPF8-216	ENST00000577001	BICC1	Q9H694	974 aa	Known RBP	17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	SGSM2	O43147	1006 aa		17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	SUCLG2	Q96I99	432 aa		17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	STX6	O43752	255 aa		17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	NMI	Q13287	307 aa	Predicted RBP	17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	BEND3	Q5T5X7	828 aa		17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	KIF1BP	Q96EK5	621 aa		17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	PPP1R9B	Q96SB3	815 aa		17.8	■□□□□ 0.44
PRPF8-216	ENST00000577001	FGD1	P98174	961 aa		17.79	■□□□□ 0.44
PRPF8-216	ENST00000577001	HSP90AB3P	Q58FF7	597 aa		17.79	■□□□□ 0.44
PRPF8-216	ENST00000577001	EAF2	Q96CJ1	260 aa	Predicted RBP	17.79	■□□□□ 0.44
PRPF8-216	ENST00000577001	SPATA31D1	Q6ZQQ2	1576 aa		17.79	■□□□□ 0.44
PRPF8-216	ENST00000577001	SBNO1	A3KN83	1393 aa		17.79	■□□□□ 0.44
PRPF8-216	ENST00000577001	MAP3K5	Q99683	1374 aa		17.79	■□□□□ 0.44
PRPF8-216	ENST00000577001	ADAMTS13	Q76LX8	1427 aa		17.79	■□□□□ 0.44
PRPF8-216	ENST00000577001	RAB11FIP3	O75154	756 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	SSH3	Q8TE77	659 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	UBE2Q2	Q8WVN8	375 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	MYD88	Q99836	296 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	ADCY5	O95622	1261 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	HSPA4	P34932	840 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	ME3	Q16798	604 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	STK11IP	Q8N1F8	1099 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	LSG1	Q9H089	658 aa	Known RBP	17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	SALL3	Q9BXA9	1300 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	HSP90B1	P14625	803 aa	Known RBP	17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	NEUROD6	Q96NK8	337 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001	OSBPL3	Q9H4L5	887 aa		17.78	■□□□□ 0.44
PRPF8-216	ENST00000577001		A0A0D9SFI3	127 aa		17.77	■□□□□ 0.44
PRPF8-216	ENST00000577001	G3BP1	Q13283	466 aa	Known RBP eCLIP	17.77	■□□□□ 0.44	2e-7	■■□□□ 14
PRPF8-216	ENST00000577001	EPHA10	Q5JZY3	1008 aa		17.77	■□□□□ 0.44
PRPF8-216	ENST00000577001	NFATC2IP	Q8NCF5	419 aa		17.77	■□□□□ 0.44
PRPF8-216	ENST00000577001	OVOS2	A0A0J9YW53	1432 aa		17.77	■□□□□ 0.44
PRPF8-216	ENST00000577001	OVOS2	Q6IE36	1432 aa		17.77	■□□□□ 0.44
PRPF8-216	ENST00000577001	RBM8A	Q9Y5S9	174 aa	Known RBP	17.77	■□□□□ 0.43
PRPF8-216	ENST00000577001	DDX46	Q7L014	1031 aa	Known RBP	17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001		A0A0G2JLW4	131 aa		17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001	PTMS	P20962	102 aa		17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001	LARP1B	Q659C4	914 aa	Known RBP	17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001	ZNF589	Q86UQ0	364 aa	Predicted RBP	17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001	JAK2	O60674	1132 aa		17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001	CDC37L1	Q7L3B6	337 aa		17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001	FTO	Q9C0B1	505 aa	Known RBP eCLIP	17.76	■□□□□ 0.43
PRPF8-216	ENST00000577001	DRC7	Q8IY82	874 aa		17.75	■□□□□ 0.43
PRPF8-216	ENST00000577001	ZMYND15	Q9H091	742 aa		17.75	■□□□□ 0.43
PRPF8-216	ENST00000577001	TPCN1	Q9ULQ1	816 aa		17.75	■□□□□ 0.43
PRPF8-216	ENST00000577001	LIMCH1	Q9UPQ0	1083 aa		17.75	■□□□□ 0.43
PRPF8-216	ENST00000577001	CDC42BPG	Q6DT37	1551 aa		17.75	■□□□□ 0.43
PRPF8-216	ENST00000577001	WDR33	Q9C0J8	1336 aa	Known RBP	17.75	■□□□□ 0.43
PRPF8-216	ENST00000577001	ZSCAN22	P10073	491 aa	Predicted RBP	17.75	■□□□□ 0.43
PRPF8-216	ENST00000577001	COPS6	Q7L5N1	327 aa		17.74	■□□□□ 0.43
PRPF8-216	ENST00000577001	ANKRD24	Q8TF21	1146 aa		17.74	■□□□□ 0.43
PRPF8-216	ENST00000577001	PEAK1	Q9H792	1746 aa		17.74	■□□□□ 0.43
PRPF8-216	ENST00000577001	TCHH	Q07283	1943 aa		17.74	■□□□□ 0.43
PRPF8-216	ENST00000577001	UBE3B	Q7Z3V4	1068 aa		17.74	■□□□□ 0.43
PRPF8-216	ENST00000577001	XAGE3	Q8WTP9	111 aa		17.74	■□□□□ 0.43
PRPF8-216	ENST00000577001	ZKSCAN5	Q9Y2L8	839 aa		17.74	■□□□□ 0.43
PRPF8-216	ENST00000577001	AP5Z1	O43299	807 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	OFD1	O75665	1012 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	SASH1	O94885	1247 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	CCT2	P78371	535 aa	Known RBP	17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	USP16	Q9Y5T5	823 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	MBD3	O95983	291 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	LIG1	P18858	919 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	CUL4A	Q13619	759 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	SNRK	Q9NRH2	765 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	ECHDC1	Q9NTX5	307 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	GOLGA6L4	A6NEF3	574 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	IGSF3	O75054	1194 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	LUZP1	Q86V48	1076 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	CYP46A1	Q9Y6A2	500 aa		17.73	■□□□□ 0.43
PRPF8-216	ENST00000577001	RAD50	Q92878	1312 aa		17.72	■□□□□ 0.43
PRPF8-216	ENST00000577001	F13A1	P00488	732 aa		17.72	■□□□□ 0.43
PRPF8-216	ENST00000577001	ZBTB9	Q96C00	473 aa		17.72	■□□□□ 0.43
PRPF8-216	ENST00000577001	GC	P02774	474 aa		17.72	■□□□□ 0.43
PRPF8-216	ENST00000577001	ISY1	Q9ULR0	285 aa	Known RBP	17.72	■□□□□ 0.43
PRPF8-216	ENST00000577001	NOL7	Q9UMY1	257 aa	Known RBP	17.72	■□□□□ 0.43
PRPF8-216	ENST00000577001	ARHGEF10	O15013	1369 aa		17.71	■□□□□ 0.43
PRPF8-216	ENST00000577001	RPAP1	Q9BWH6	1393 aa	Predicted RBP	17.71	■□□□□ 0.43
PRPF8-216	ENST00000577001	THEMIS	Q8N1K5	641 aa	Predicted RBP	17.71	■□□□□ 0.43
PRPF8-216	ENST00000577001	ST3GAL1	Q11201	340 aa		17.71	■□□□□ 0.43
PRPF8-216	ENST00000577001	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	17.71	■□□□□ 0.43
PRPF8-216	ENST00000577001	ANKRD26	Q9UPS8	1709 aa		17.71	■□□□□ 0.43
PRPF8-216	ENST00000577001	CREB3L3	Q68CJ9	461 aa		17.71	■□□□□ 0.42
PRPF8-216	ENST00000577001	LARP1	Q6PKG0	1096 aa	Known RBP	17.71	■□□□□ 0.42
PRPF8-216	ENST00000577001	SYTL4	Q96C24	671 aa	Predicted RBP	17.71	■□□□□ 0.42
PRPF8-216	ENST00000577001	HYPK	Q9NX55	129 aa		17.71	■□□□□ 0.42
PRPF8-216	ENST00000577001	STAP2	Q9UGK3	403 aa		17.71	■□□□□ 0.42
PRPF8-216	ENST00000577001	ZNF594	Q96JF6	807 aa	Predicted RBP	17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	ADCY9	O60503	1353 aa		17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	RNMT	O43148	476 aa	Known RBP	17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	GLRX3	O76003	335 aa	Known RBP	17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	PLEKHO1	Q53GL0	409 aa	Predicted RBP	17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	CLEC17A	Q6ZS10	378 aa		17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	TTC21A	Q8NDW8	1320 aa		17.7	■□□□□ 0.42
PRPF8-216	ENST00000577001	ZKSCAN1	P17029	563 aa	Predicted RBP	17.69	■□□□□ 0.42
PRPF8-216	ENST00000577001	TIMM10	P62072	90 aa		17.69	■□□□□ 0.42

Retrieved 100 of 20,778 RNA–protein pairs in 62 ms