RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 MKRN1Q9UHC7 482 aaKnown RBP14.4□□□□□ -0.1
CALCOCO2-228ENST00000576582 A1BGP04217 495 aa14.39□□□□□ -0.11
CALCOCO2-228ENST00000576582 LDHDQ86WU2 507 aa14.39□□□□□ -0.11
CALCOCO2-228ENST00000576582 CCER1Q8TC90 406 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-228ENST00000576582 L3MBTL3Q96JM7 780 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-228ENST00000576582 DICER1Q9UPY3 1922 aaKnown RBP14.39□□□□□ -0.11
CALCOCO2-228ENST00000576582 FER1L6Q2WGJ9 1857 aa14.38□□□□□ -0.11
CALCOCO2-228ENST00000576582 DZIP3Q86Y13 1208 aaKnown RBP14.38□□□□□ -0.11
CALCOCO2-228ENST00000576582 C7orf43Q8WVR3 580 aa14.38□□□□□ -0.11
CALCOCO2-228ENST00000576582 PRDM10Q9NQV6 1147 aa14.38□□□□□ -0.11
CALCOCO2-228ENST00000576582 PASKQ96RG2 1323 aa14.38□□□□□ -0.11
CALCOCO2-228ENST00000576582 SIPA1L3O60292 1781 aaPredicted RBP14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 RGL2O15211 777 aa14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 POTEIP0CG38 1075 aa14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 POTEJP0CG39 1038 aa14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 CCDC93Q567U6 631 aa14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 CC2D1BQ5T0F9 858 aaKnown RBP14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 TAF1DQ9H5J8 278 aaPredicted RBP14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 ANKRD31Q8N7Z5 1873 aa14.37□□□□□ -0.11
CALCOCO2-228ENST00000576582 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 KLRG2A4D1S0 409 aaPredicted RBP14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 NPR1P16066 1061 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 TPTE2Q6XPS3 522 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 NBPF5PQ86XG9 351 aaPredicted RBP14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 RTKN2Q8IZC4 609 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 ZNF652Q9Y2D9 606 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 GTF3C3Q9Y5Q9 886 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 SCN7AQ01118 1682 aa14.36□□□□□ -0.11
CALCOCO2-228ENST00000576582 CEMIPQ8WUJ3 1361 aa14.35□□□□□ -0.11
CALCOCO2-228ENST00000576582 TMEM88BA6NKF7 163 aa14.35□□□□□ -0.11
CALCOCO2-228ENST00000576582 ITGBL1O95965 494 aaPredicted RBP14.35□□□□□ -0.11
CALCOCO2-228ENST00000576582 CTCFP49711 727 aaPredicted RBP14.35□□□□□ -0.11
CALCOCO2-228ENST00000576582 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
CALCOCO2-228ENST00000576582 FOXN1O15353 648 aa14.34□□□□□ -0.11
CALCOCO2-228ENST00000576582 FKBP4Q02790 459 aaKnown RBP eCLIP14.34□□□□□ -0.11
CALCOCO2-228ENST00000576582 PNMA8AQ86V59 439 aaPredicted RBP14.34□□□□□ -0.11
CALCOCO2-228ENST00000576582 HACL1Q9UJ83 578 aa14.34□□□□□ -0.11
CALCOCO2-228ENST00000576582 SLX4Q8IY92 1834 aa14.34□□□□□ -0.11
CALCOCO2-228ENST00000576582 SNRPA1P09661 255 aaKnown RBP14.33□□□□□ -0.12
CALCOCO2-228ENST00000576582 ALDH1B1P30837 517 aa14.33□□□□□ -0.12
CALCOCO2-228ENST00000576582 VEGFBP49765 207 aa14.33□□□□□ -0.12
CALCOCO2-228ENST00000576582 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
CALCOCO2-228ENST00000576582 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
CALCOCO2-228ENST00000576582 SCN4AP35499 1836 aa14.32□□□□□ -0.12
CALCOCO2-228ENST00000576582 KCNQ3O43525 872 aa14.32□□□□□ -0.12
CALCOCO2-228ENST00000576582 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
CALCOCO2-228ENST00000576582 CLEC11AQ9Y240 323 aa14.32□□□□□ -0.12
CALCOCO2-228ENST00000576582 FZD9O00144 591 aa14.31□□□□□ -0.12
CALCOCO2-228ENST00000576582 EPHX2P34913 555 aa14.31□□□□□ -0.12
CALCOCO2-228ENST00000576582 EAPPQ56P03 285 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO2-228ENST00000576582 PHACTR3Q96KR7 559 aa14.31□□□□□ -0.12
CALCOCO2-228ENST00000576582 ZNF277Q9NRM2 450 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO2-228ENST00000576582 NIP7Q9Y221 180 aaKnown RBP eCLIP14.31□□□□□ -0.12
CALCOCO2-228ENST00000576582 DEFB115Q30KQ5 88 aa14.3□□□□□ -0.12
CALCOCO2-228ENST00000576582 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
CALCOCO2-228ENST00000576582 GPC2Q8N158 579 aa14.3□□□□□ -0.12
CALCOCO2-228ENST00000576582 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
CALCOCO2-228ENST00000576582 CFAP53Q96M91 514 aa14.3□□□□□ -0.12
CALCOCO2-228ENST00000576582 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 MAP2K1Q02750 393 aaPredicted RBP14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 GRIPAP1Q4V328 841 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 CC2D2BQ6DHV5 1058 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 SYNE4Q8N205 404 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 NUDCQ9Y266 331 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 ZNF541Q9H0D2 1346 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 BCORQ6W2J9 1755 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 ARFGEF2Q9Y6D5 1785 aa14.29□□□□□ -0.12
CALCOCO2-228ENST00000576582 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
CALCOCO2-228ENST00000576582 GTF2E1P29083 439 aaPredicted RBP14.28□□□□□ -0.12
CALCOCO2-228ENST00000576582 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
CALCOCO2-228ENST00000576582 JDP2Q8WYK2 163 aa14.28□□□□□ -0.12
CALCOCO2-228ENST00000576582 PSMD1Q99460 953 aa14.28□□□□□ -0.12
CALCOCO2-228ENST00000576582 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
CALCOCO2-228ENST00000576582 PRAMEF22A3QJZ6 481 aa14.27□□□□□ -0.13
CALCOCO2-228ENST00000576582 NBPF26B4DH59 902 aa14.27□□□□□ -0.13
CALCOCO2-228ENST00000576582 LBX1P52954 281 aa14.27□□□□□ -0.13
CALCOCO2-228ENST00000576582 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.13
CALCOCO2-228ENST00000576582 NBPF15Q8N660 670 aa14.27□□□□□ -0.13
CALCOCO2-228ENST00000576582 CRY2Q49AN0 593 aa14.26□□□□□ -0.13
CALCOCO2-228ENST00000576582 MAP1SQ66K74 1059 aaPredicted RBP14.26□□□□□ -0.13
CALCOCO2-228ENST00000576582 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
CALCOCO2-228ENST00000576582 NYXQ9GZU5 481 aa14.26□□□□□ -0.13
CALCOCO2-228ENST00000576582 RNF123Q5XPI4 1314 aa14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 WDR33Q9C0J8 1336 aaKnown RBP14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 FAM177BA6PVY3 158 aa14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 EIF6P56537 245 aaKnown RBP14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 MCM10Q7L590 875 aa14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 ABT1Q9ULW3 272 aaKnown RBP14.25□□□□□ -0.13
CALCOCO2-228ENST00000576582 U2AF1L5P0DN76 240 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO2-228ENST00000576582 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO2-228ENST00000576582 U2AF1Q01081 240 aaKnown RBP eCLIP14.24□□□□□ -0.13
CALCOCO2-228ENST00000576582 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO2-228ENST00000576582 HLFQ16534 295 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms