RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 NIP7Q9Y221 180 aaKnown RBP eCLIP8.68□□□□□ -1.02
POLR2A-204ENST00000575547 RRP7AQ9Y3A4 280 aaKnown RBP8.68□□□□□ -1.02
POLR2A-204ENST00000575547 CEP350Q5VT06 3117 aa8.68□□□□□ -1.02
POLR2A-204ENST00000575547 ADAMTS7Q9UKP4 1686 aa8.68□□□□□ -1.02
POLR2A-204ENST00000575547 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 NFKBIEO00221 500 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 SRGNP10124 158 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 PRELPP51888 382 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 HTRA3P83110 453 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 IFFO2Q5TF58 517 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 NBPF10Q6P3W6 841 aaKnown RBP8.67□□□□□ -1.02
POLR2A-204ENST00000575547 NBPF15Q8N660 670 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 DNAJC5GQ8N7S2 189 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 TAOK3Q9H2K8 898 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 MAPK8IP3Q9UPT6 1336 aa8.67□□□□□ -1.02
POLR2A-204ENST00000575547 SBF1O95248 1867 aa8.66□□□□□ -1.02
POLR2A-204ENST00000575547 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
POLR2A-204ENST00000575547 NPR1P16066 1061 aa8.66□□□□□ -1.02
POLR2A-204ENST00000575547 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
POLR2A-204ENST00000575547 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
POLR2A-204ENST00000575547 MYL6BP14649 208 aa8.65□□□□□ -1.02
POLR2A-204ENST00000575547 ALDH1B1P30837 517 aa8.65□□□□□ -1.02
POLR2A-204ENST00000575547 HLFQ16534 295 aa8.65□□□□□ -1.02
POLR2A-204ENST00000575547 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
POLR2A-204ENST00000575547 THUMPD2Q9BTF0 503 aaKnown RBP8.65□□□□□ -1.02
POLR2A-204ENST00000575547 NYXQ9GZU5 481 aa8.65□□□□□ -1.02
POLR2A-204ENST00000575547 NRXN2Q9P2S2 1712 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 ERVV-1B6SEH8 477 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 RGL2O15211 777 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 EIF2S2P20042 333 aaKnown RBP8.64□□□□□ -1.03
POLR2A-204ENST00000575547 RIPK4P57078 832 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 EIF4A1P60842 406 aaKnown RBP8.64□□□□□ -1.03
POLR2A-204ENST00000575547 CCDC93Q567U6 631 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 RTKN2Q8IZC4 609 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 KLRG1Q96E93 195 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 PLEKHF1Q96S99 279 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 TSPYL4Q9UJ04 414 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 CCDC88AQ3V6T2 1871 aa8.64□□□□□ -1.03
POLR2A-204ENST00000575547 SIPA1L3O60292 1781 aaPredicted RBP8.63□□□□□ -1.03
POLR2A-204ENST00000575547 POTECB2RU33 542 aa8.63□□□□□ -1.03
POLR2A-204ENST00000575547 DDNO94850 711 aaPredicted RBP8.63□□□□□ -1.03
POLR2A-204ENST00000575547 GPTP24298 496 aa8.63□□□□□ -1.03
POLR2A-204ENST00000575547 RALBP1Q15311 655 aa8.63□□□□□ -1.03
POLR2A-204ENST00000575547 MAP3K15Q6ZN16 1313 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 LTBP3Q9NS15 1303 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 KLRG2A4D1S0 409 aaPredicted RBP8.62□□□□□ -1.03
POLR2A-204ENST00000575547 FKBP4Q02790 459 aaKnown RBP eCLIP8.62□□□□□ -1.03
POLR2A-204ENST00000575547 DDX10Q13206 875 aaKnown RBP8.62□□□□□ -1.03
POLR2A-204ENST00000575547 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 CHADLQ6NUI6 762 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 TTLL7Q6ZT98 887 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 NUTM1Q86Y26 1132 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 SYNE4Q8N205 404 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 C7orf43Q8WVR3 580 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 RPGRQ92834 1020 aaKnown RBP8.62□□□□□ -1.03
POLR2A-204ENST00000575547 TMX4Q9H1E5 349 aaPredicted RBP8.62□□□□□ -1.03
POLR2A-204ENST00000575547 ZBTB3Q9H5J0 574 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 ZNF277Q9NRM2 450 aaPredicted RBP8.62□□□□□ -1.03
POLR2A-204ENST00000575547 CLEC11AQ9Y240 323 aa8.62□□□□□ -1.03
POLR2A-204ENST00000575547 IQCA1LA6NCM1 817 aa8.61□□□□□ -1.03
POLR2A-204ENST00000575547 TCERG1O14776 1098 aaKnown RBP8.61□□□□□ -1.03
POLR2A-204ENST00000575547 LMOD3Q0VAK6 560 aa8.61□□□□□ -1.03
POLR2A-204ENST00000575547 OLFM4Q6UX06 510 aa8.61□□□□□ -1.03
POLR2A-204ENST00000575547 PPP1R42Q7Z4L9 355 aa8.61□□□□□ -1.03
POLR2A-204ENST00000575547 RBM17Q96I25 401 aaKnown RBP8.61□□□□□ -1.03
POLR2A-204ENST00000575547 LAS1LQ9Y4W2 734 aaKnown RBP8.61□□□□□ -1.03
POLR2A-204ENST00000575547 ANKRD31Q8N7Z5 1873 aa8.61□□□□□ -1.03
POLR2A-204ENST00000575547 SLX4Q8IY92 1834 aa8.61□□□□□ -1.03
POLR2A-204ENST00000575547 IARSP41252 1262 aaKnown RBP8.6□□□□□ -1.03
POLR2A-204ENST00000575547 TMPOP42166 694 aaKnown RBP8.6□□□□□ -1.03
POLR2A-204ENST00000575547 EAPPQ56P03 285 aaPredicted RBP8.6□□□□□ -1.03
POLR2A-204ENST00000575547 SUSD4Q5VX71 490 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 JMYQ8N9B5 988 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 JDP2Q8WYK2 163 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 NECTIN2Q92692 538 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 BABAM1Q9NWV8 329 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 DLEC1Q9Y238 1755 aa8.6□□□□□ -1.03
POLR2A-204ENST00000575547 SCN7AQ01118 1682 aa8.59□□□□□ -1.03
POLR2A-204ENST00000575547 TNRC6CQ9HCJ0 1690 aaKnown RBP8.59□□□□□ -1.03
POLR2A-204ENST00000575547 ERBB4Q15303 1308 aa8.59□□□□□ -1.03
POLR2A-204ENST00000575547 EIF6P56537 245 aaKnown RBP8.59□□□□□ -1.03
POLR2A-204ENST00000575547 AIMP1Q12904 312 aaKnown RBP8.59□□□□□ -1.03
POLR2A-204ENST00000575547 WDR43Q15061 677 aaKnown RBP eCLIP8.59□□□□□ -1.03
POLR2A-204ENST00000575547 GIGYF2Q6Y7W6 1299 aaKnown RBP8.59□□□□□ -1.03
POLR2A-204ENST00000575547 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
POLR2A-204ENST00000575547 ZNF34Q8IZ26 560 aa8.59□□□□□ -1.03
POLR2A-204ENST00000575547 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.03
POLR2A-204ENST00000575547 TAF1DQ9H5J8 278 aaPredicted RBP8.59□□□□□ -1.03
POLR2A-204ENST00000575547 HACL1Q9UJ83 578 aa8.59□□□□□ -1.03
POLR2A-204ENST00000575547 FER1L6Q2WGJ9 1857 aa8.58□□□□□ -1.04
POLR2A-204ENST00000575547 ANXA1P04083 346 aa8.58□□□□□ -1.04
POLR2A-204ENST00000575547 POTEIP0CG38 1075 aa8.58□□□□□ -1.04
POLR2A-204ENST00000575547 POTEJP0CG39 1038 aa8.58□□□□□ -1.04
POLR2A-204ENST00000575547 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
POLR2A-204ENST00000575547 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
POLR2A-204ENST00000575547 PARP10Q53GL7 1025 aa8.58□□□□□ -1.04
POLR2A-204ENST00000575547 COPS6Q7L5N1 327 aa8.58□□□□□ -1.04
POLR2A-204ENST00000575547 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms