RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 CRKLP46109 303 aaKnown RBP17.35■□□□□ 0.37
ERCC4-207ENST00000575156 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
ERCC4-207ENST00000575156 LINS1Q8NG48 757 aa17.35■□□□□ 0.37
ERCC4-207ENST00000575156 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
ERCC4-207ENST00000575156 ATP5J2-PTCD1G3V325 749 aa17.34■□□□□ 0.37
ERCC4-207ENST00000575156 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
ERCC4-207ENST00000575156 GNAI2P04899 355 aa17.34■□□□□ 0.37
ERCC4-207ENST00000575156 GNAI3P08754 354 aa17.34■□□□□ 0.37
ERCC4-207ENST00000575156 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
ERCC4-207ENST00000575156 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
ERCC4-207ENST00000575156 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
ERCC4-207ENST00000575156 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.37
ERCC4-207ENST00000575156 UBTFL1P0CB47 393 aaPredicted RBP17.33■□□□□ 0.37
ERCC4-207ENST00000575156 ARXQ96QS3 562 aa17.33■□□□□ 0.37
ERCC4-207ENST00000575156 BCL11BQ9C0K0 894 aaPredicted RBP17.33■□□□□ 0.37
ERCC4-207ENST00000575156 TRIM37O94972 964 aa17.33■□□□□ 0.36
ERCC4-207ENST00000575156 ANKRD44Q8N8A2 993 aa17.33■□□□□ 0.36
ERCC4-207ENST00000575156 CCDC87Q9NVE4 849 aa17.33■□□□□ 0.36
ERCC4-207ENST00000575156 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
ERCC4-207ENST00000575156 ARFGEF2Q9Y6D5 1785 aa17.32■□□□□ 0.36
ERCC4-207ENST00000575156 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
ERCC4-207ENST00000575156 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
ERCC4-207ENST00000575156 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
ERCC4-207ENST00000575156 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
ERCC4-207ENST00000575156 GCKRQ14397 625 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 RPAP2Q8IXW5 612 aaPredicted RBP17.3■□□□□ 0.36
ERCC4-207ENST00000575156 TBC1D2BQ9UPU7 963 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 MYH14Q7Z406 1995 aaKnown RBP17.3■□□□□ 0.36
ERCC4-207ENST00000575156 NUP188Q5SRE5 1749 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 CICQ96RK0 1608 aaPredicted RBP17.3■□□□□ 0.36
ERCC4-207ENST00000575156 GRM8O00222 908 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 HLFQ16534 295 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
ERCC4-207ENST00000575156 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
ERCC4-207ENST00000575156 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
ERCC4-207ENST00000575156 KIF6Q6ZMV9 814 aa17.29■□□□□ 0.36
ERCC4-207ENST00000575156 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
ERCC4-207ENST00000575156 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
ERCC4-207ENST00000575156 KAZALD1Q96I82 304 aa17.28■□□□□ 0.36
ERCC4-207ENST00000575156 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
ERCC4-207ENST00000575156 UTYO14607 1347 aa17.28■□□□□ 0.36
ERCC4-207ENST00000575156 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
ERCC4-207ENST00000575156 LRRC4BQ9NT99 713 aa17.27■□□□□ 0.36
ERCC4-207ENST00000575156 ZNF831Q5JPB2 1677 aa17.27■□□□□ 0.35
ERCC4-207ENST00000575156 RREB1Q92766 1687 aa17.27■□□□□ 0.35
ERCC4-207ENST00000575156 RGS3P49796 1198 aa17.27■□□□□ 0.35
ERCC4-207ENST00000575156 ATP8B2P98198 1209 aa17.27■□□□□ 0.35
ERCC4-207ENST00000575156 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.35
ERCC4-207ENST00000575156 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
ERCC4-207ENST00000575156 A0A087WZG4 1122 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 RTL5Q5HYW3 569 aaPredicted RBP17.25■□□□□ 0.35
ERCC4-207ENST00000575156 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
ERCC4-207ENST00000575156 UBE3BQ7Z3V4 1068 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 ISCA1Q9BUE6 129 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 DCTPP1Q9H773 170 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 LY75O60449 1722 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
ERCC4-207ENST00000575156 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
ERCC4-207ENST00000575156 GPTP24298 496 aa17.24■□□□□ 0.35
ERCC4-207ENST00000575156 CASP7P55210 303 aa17.24■□□□□ 0.35
ERCC4-207ENST00000575156 EPHA10Q5JZY3 1008 aa17.24■□□□□ 0.35
ERCC4-207ENST00000575156 CWC25Q9NXE8 425 aaPredicted RBP17.24■□□□□ 0.35
ERCC4-207ENST00000575156 COL15A1P39059 1388 aa17.24■□□□□ 0.35
ERCC4-207ENST00000575156 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
ERCC4-207ENST00000575156 NUCB1Q02818 461 aa17.24■□□□□ 0.35
ERCC4-207ENST00000575156 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
ERCC4-207ENST00000575156 BICC1Q9H694 974 aaKnown RBP17.24■□□□□ 0.35
ERCC4-207ENST00000575156 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
ERCC4-207ENST00000575156 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
ERCC4-207ENST00000575156 ANKRD45Q5TZF3 282 aa17.23■□□□□ 0.35
ERCC4-207ENST00000575156 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
ERCC4-207ENST00000575156 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 H7C1W4 665 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 APBB1O00213 710 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 HMMRO75330 724 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 PDE4AP27815 886 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
ERCC4-207ENST00000575156 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 GNPATO15228 680 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 PROM2Q8N271 834 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 SSH3Q8TE77 659 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
ERCC4-207ENST00000575156 POLA2Q14181 598 aa17.21■□□□□ 0.35
ERCC4-207ENST00000575156 BCL11AQ9H165 835 aa17.21■□□□□ 0.35
ERCC4-207ENST00000575156 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
ERCC4-207ENST00000575156 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
ERCC4-207ENST00000575156 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
ERCC4-207ENST00000575156 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
ERCC4-207ENST00000575156 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
ERCC4-207ENST00000575156 MTX1Q13505 466 aa17.2■□□□□ 0.34
ERCC4-207ENST00000575156 SYNE4Q8N205 404 aa17.2■□□□□ 0.34
ERCC4-207ENST00000575156 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
ERCC4-207ENST00000575156 SMARCA5O60264 1052 aaPredicted RBP17.19■□□□□ 0.34
ERCC4-207ENST00000575156 APBA3O96018 575 aa17.19■□□□□ 0.34
ERCC4-207ENST00000575156 FAM89AQ96GI7 184 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms