RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 GCKRQ14397 625 aa25.53■■□□□ 1.68
CHRNE-202ENST00000572438 ACSBG1Q96GR2 724 aa25.53■■□□□ 1.68
CHRNE-202ENST00000572438 SLC4A9Q96Q91 983 aa25.53■■□□□ 1.68
CHRNE-202ENST00000572438 TTLL7Q6ZT98 887 aa25.53■■□□□ 1.68
CHRNE-202ENST00000572438 ARFGEF2Q9Y6D5 1785 aa25.52■■□□□ 1.68
CHRNE-202ENST00000572438 MTX1Q13505 466 aa25.52■■□□□ 1.68
CHRNE-202ENST00000572438 EXOC6BQ9Y2D4 811 aa25.52■■□□□ 1.68
CHRNE-202ENST00000572438 APBB1O00213 710 aa25.51■■□□□ 1.67
CHRNE-202ENST00000572438 SRGAP3O43295 1099 aa25.51■■□□□ 1.67
CHRNE-202ENST00000572438 A0A0G2JS52 829 aa25.5■■□□□ 1.67
CHRNE-202ENST00000572438 AFF2P51816 1311 aa25.5■■□□□ 1.67
CHRNE-202ENST00000572438 SMARCA5O60264 1052 aaPredicted RBP25.49■■□□□ 1.67
CHRNE-202ENST00000572438 CYP19A1P11511 503 aaPredicted RBP25.49■■□□□ 1.67
CHRNE-202ENST00000572438 BMP2KLQ5H9B9 411 aa25.49■■□□□ 1.67
CHRNE-202ENST00000572438 PLEKHM2Q8IWE5 1019 aa25.49■■□□□ 1.67
CHRNE-202ENST00000572438 SUCLG2Q96I99 432 aa25.49■■□□□ 1.67
CHRNE-202ENST00000572438 MYT1Q01538 1121 aa25.48■■□□□ 1.67
CHRNE-202ENST00000572438 LRRCC1Q9C099 1032 aa25.48■■□□□ 1.67
CHRNE-202ENST00000572438 THSD7AQ9UPZ6 1657 aa25.48■■□□□ 1.67
CHRNE-202ENST00000572438 KAT6BQ8WYB5 2073 aa25.48■■□□□ 1.67
CHRNE-202ENST00000572438 NUP188Q5SRE5 1749 aa25.47■■□□□ 1.67
CHRNE-202ENST00000572438 C16orf71Q8IYS4 520 aaPredicted RBP25.47■■□□□ 1.67
CHRNE-202ENST00000572438 KAZALD1Q96I82 304 aa25.47■■□□□ 1.67
CHRNE-202ENST00000572438 ATP5J2-PTCD1G3V325 749 aa25.47■■□□□ 1.67
CHRNE-202ENST00000572438 ANP32AP39687 249 aaKnown RBP25.47■■□□□ 1.67
CHRNE-202ENST00000572438 GJD4Q96KN9 370 aaPredicted RBP25.47■■□□□ 1.67
CHRNE-202ENST00000572438 ZBTB3Q9H5J0 574 aa25.47■■□□□ 1.67
CHRNE-202ENST00000572438 TJP1Q07157 1748 aa25.46■■□□□ 1.67
CHRNE-202ENST00000572438 RAB11FIP3O75154 756 aa25.45■■□□□ 1.66
CHRNE-202ENST00000572438 SURF6O75683 361 aaKnown RBP25.45■■□□□ 1.66
CHRNE-202ENST00000572438 NPM2Q86SE8 214 aaKnown RBP25.44■■□□□ 1.66
CHRNE-202ENST00000572438 SMARCC1Q92922 1105 aaPredicted RBP25.44■■□□□ 1.66
CHRNE-202ENST00000572438 BICC1Q9H694 974 aaKnown RBP25.44■■□□□ 1.66
CHRNE-202ENST00000572438 ZNF330Q9Y3S2 320 aaPredicted RBP25.44■■□□□ 1.66
CHRNE-202ENST00000572438 ATRNO75882 1429 aa25.44■■□□□ 1.66
CHRNE-202ENST00000572438 KCNQ2O43526 872 aa25.44■■□□□ 1.66
CHRNE-202ENST00000572438 KIF6Q6ZMV9 814 aa25.44■■□□□ 1.66
CHRNE-202ENST00000572438 OTUD7AQ8TE49 926 aaPredicted RBP25.44■■□□□ 1.66
CHRNE-202ENST00000572438 COL15A1P39059 1388 aa25.43■■□□□ 1.66
CHRNE-202ENST00000572438 PALLDQ8WX93 1383 aa25.43■■□□□ 1.66
CHRNE-202ENST00000572438 BCL11AQ9H165 835 aa25.43■■□□□ 1.66
CHRNE-202ENST00000572438 TRPC5Q9UL62 973 aaPredicted RBP25.43■■□□□ 1.66
CHRNE-202ENST00000572438 A0A087WZG4 1122 aa25.42■■□□□ 1.66
CHRNE-202ENST00000572438 LOC102724428A0A0B4J2F2 783 aa25.42■■□□□ 1.66
CHRNE-202ENST00000572438 SIK1P57059 783 aa25.42■■□□□ 1.66
CHRNE-202ENST00000572438 HSP90AB4PQ58FF6 505 aa25.42■■□□□ 1.66
CHRNE-202ENST00000572438 NOP58Q9Y2X3 529 aaKnown RBP25.42■■□□□ 1.66
CHRNE-202ENST00000572438 AFDNP55196 1824 aaKnown RBP25.42■■□□□ 1.66
CHRNE-202ENST00000572438 CWC25Q9NXE8 425 aaPredicted RBP25.42■■□□□ 1.66
CHRNE-202ENST00000572438 ZBTB1Q9Y2K1 713 aa25.42■■□□□ 1.66
CHRNE-202ENST00000572438 SEC24BO95487 1268 aa25.41■■□□□ 1.66
CHRNE-202ENST00000572438 UBE3BQ7Z3V4 1068 aa25.41■■□□□ 1.66
CHRNE-202ENST00000572438 CCDC191Q8NCU4 936 aa25.41■■□□□ 1.66
CHRNE-202ENST00000572438 ATP6V1AP38606 617 aa25.4■■□□□ 1.66
CHRNE-202ENST00000572438 CASP7P55210 303 aa25.4■■□□□ 1.66
CHRNE-202ENST00000572438 TTC22Q5TAA0 569 aa25.4■■□□□ 1.66
CHRNE-202ENST00000572438 IL6STP40189 918 aaPredicted RBP25.4■■□□□ 1.66
CHRNE-202ENST00000572438 TCIRG1Q13488 830 aa25.4■■□□□ 1.66
CHRNE-202ENST00000572438 MAP3K15Q6ZN16 1313 aa25.39■■□□□ 1.66
CHRNE-202ENST00000572438 CICQ96RK0 1608 aaPredicted RBP25.39■■□□□ 1.66
CHRNE-202ENST00000572438 H7C1W4 665 aa25.39■■□□□ 1.65
CHRNE-202ENST00000572438 ONECUT3O60422 494 aaPredicted RBP25.39■■□□□ 1.65
CHRNE-202ENST00000572438 ISCA1Q9BUE6 129 aa25.39■■□□□ 1.65
CHRNE-202ENST00000572438 OSBPL3Q9H4L5 887 aa25.39■■□□□ 1.65
CHRNE-202ENST00000572438 GSPT1P15170 499 aaKnown RBP25.38■■□□□ 1.65
CHRNE-202ENST00000572438 EPHA10Q5JZY3 1008 aa25.38■■□□□ 1.65
CHRNE-202ENST00000572438 RHPN1Q8TCX5 695 aa25.38■■□□□ 1.65
CHRNE-202ENST00000572438 KIF1BPQ96EK5 621 aa25.38■■□□□ 1.65
CHRNE-202ENST00000572438 SALL3Q9BXA9 1300 aa25.38■■□□□ 1.65
CHRNE-202ENST00000572438 JARID2Q92833 1246 aaPredicted RBP25.37■■□□□ 1.65
CHRNE-202ENST00000572438 TRIM28Q13263 835 aaKnown RBP25.37■■□□□ 1.65
CHRNE-202ENST00000572438 RABL6Q3YEC7 729 aaPredicted RBP25.37■■□□□ 1.65
CHRNE-202ENST00000572438 CCDC87Q9NVE4 849 aa25.37■■□□□ 1.65
CHRNE-202ENST00000572438 PDE1AP54750 535 aa25.36■■□□□ 1.65
CHRNE-202ENST00000572438 ITPK1Q13572 414 aa25.36■■□□□ 1.65
CHRNE-202ENST00000572438 INTS5Q6P9B9 1019 aaKnown RBP25.36■■□□□ 1.65
CHRNE-202ENST00000572438 GIGYF2Q6Y7W6 1299 aaKnown RBP25.35■■□□□ 1.65
CHRNE-202ENST00000572438 ARXQ96QS3 562 aa25.35■■□□□ 1.65
CHRNE-202ENST00000572438 CRKLP46109 303 aaKnown RBP25.35■■□□□ 1.65
CHRNE-202ENST00000572438 OS9Q13438 667 aaPredicted RBP25.35■■□□□ 1.65
CHRNE-202ENST00000572438 UPF2Q9HAU5 1272 aaKnown RBP25.35■■□□□ 1.65
CHRNE-202ENST00000572438 IL1RAPL2Q9NP60 686 aa25.35■■□□□ 1.65
CHRNE-202ENST00000572438 MX1P20591 662 aa25.34■■□□□ 1.65
CHRNE-202ENST00000572438 ERC1Q8IUD2 1116 aa25.34■■□□□ 1.65
CHRNE-202ENST00000572438 PA2G4Q9UQ80 394 aaKnown RBP25.34■■□□□ 1.65
CHRNE-202ENST00000572438 EIF5P55010 431 aaKnown RBP25.33■■□□□ 1.65
CHRNE-202ENST00000572438 HSP90AB3PQ58FF7 597 aa25.33■■□□□ 1.65
CHRNE-202ENST00000572438 ERVV-1B6SEH8 477 aa25.33■■□□□ 1.64
CHRNE-202ENST00000572438 SEPT12Q8IYM1 358 aa25.33■■□□□ 1.64
CHRNE-202ENST00000572438 IPO9Q96P70 1041 aaKnown RBP25.33■■□□□ 1.64
CHRNE-202ENST00000572438 QTRT2Q9H974 415 aaKnown RBP25.33■■□□□ 1.64
CHRNE-202ENST00000572438 STAP2Q9UGK3 403 aa25.33■■□□□ 1.64
CHRNE-202ENST00000572438 ZNF831Q5JPB2 1677 aa25.32■■□□□ 1.64
CHRNE-202ENST00000572438 RREB1Q92766 1687 aa25.32■■□□□ 1.64
CHRNE-202ENST00000572438 DZIP3Q86Y13 1208 aaKnown RBP25.32■■□□□ 1.64
CHRNE-202ENST00000572438 HLFQ16534 295 aa25.31■■□□□ 1.64
CHRNE-202ENST00000572438 NHSQ6T4R5 1651 aa25.31■■□□□ 1.64
CHRNE-202ENST00000572438 CDC45O75419 566 aa25.3■■□□□ 1.64
CHRNE-202ENST00000572438 FOXO4P98177 505 aa25.3■■□□□ 1.64
CHRNE-202ENST00000572438 G3BP1Q13283 466 aaKnown RBP eCLIP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms