RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TMPOP42166 694 aaKnown RBP18■□□□□ 0.47
RPAIN-209ENST00000571558 CNKSR1Q969H4 720 aa18■□□□□ 0.47
RPAIN-209ENST00000571558 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
RPAIN-209ENST00000571558 MKRN1Q9UHC7 482 aaKnown RBP18■□□□□ 0.47
RPAIN-209ENST00000571558 CNTNAP1P78357 1384 aa18■□□□□ 0.47
RPAIN-209ENST00000571558 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
RPAIN-209ENST00000571558 CANXP27824 592 aaKnown RBP17.99■□□□□ 0.47
RPAIN-209ENST00000571558 NFE2L2Q16236 605 aa17.99■□□□□ 0.47
RPAIN-209ENST00000571558 NGEFQ8N5V2 710 aa17.99■□□□□ 0.47
RPAIN-209ENST00000571558 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
RPAIN-209ENST00000571558 CTCFP49711 727 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-209ENST00000571558 LDHDQ86WU2 507 aa17.98■□□□□ 0.47
RPAIN-209ENST00000571558 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
RPAIN-209ENST00000571558 DICER1Q9UPY3 1922 aaKnown RBP17.98■□□□□ 0.47
RPAIN-209ENST00000571558 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
RPAIN-209ENST00000571558 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
RPAIN-209ENST00000571558 MTHFSDQ2M296 383 aaKnown RBP17.98■□□□□ 0.47
RPAIN-209ENST00000571558 STYK1Q6J9G0 422 aa17.98■□□□□ 0.47
RPAIN-209ENST00000571558 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
RPAIN-209ENST00000571558 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
RPAIN-209ENST00000571558 L3MBTL3Q96JM7 780 aaPredicted RBP17.98■□□□□ 0.47
RPAIN-209ENST00000571558 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
RPAIN-209ENST00000571558 FER1L6Q2WGJ9 1857 aa17.97■□□□□ 0.47
RPAIN-209ENST00000571558 FOXN1O15353 648 aa17.97■□□□□ 0.47
RPAIN-209ENST00000571558 DDNO94850 711 aaPredicted RBP17.97■□□□□ 0.47
RPAIN-209ENST00000571558 NEFMP07197 916 aa17.97■□□□□ 0.47
RPAIN-209ENST00000571558 CCDC27Q2M243 656 aa17.97■□□□□ 0.47
RPAIN-209ENST00000571558 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
RPAIN-209ENST00000571558 PRR5LQ6MZQ0 368 aa17.97■□□□□ 0.47
RPAIN-209ENST00000571558 IL6STP40189 918 aaPredicted RBP17.96■□□□□ 0.47
RPAIN-209ENST00000571558 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
RPAIN-209ENST00000571558 TRIM35Q9UPQ4 493 aa17.96■□□□□ 0.47
RPAIN-209ENST00000571558 TMEM88BA6NKF7 163 aa17.95■□□□□ 0.46
RPAIN-209ENST00000571558 SRGNP10124 158 aa17.95■□□□□ 0.46
RPAIN-209ENST00000571558 GAS2L2Q8NHY3 880 aa17.95■□□□□ 0.46
RPAIN-209ENST00000571558 SETDB2Q96T68 719 aa17.95■□□□□ 0.46
RPAIN-209ENST00000571558 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
RPAIN-209ENST00000571558 RIPK4P57078 832 aa17.94■□□□□ 0.46
RPAIN-209ENST00000571558 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
RPAIN-209ENST00000571558 MASTLQ96GX5 879 aa17.94■□□□□ 0.46
RPAIN-209ENST00000571558 UBR2Q8IWV8 1755 aa17.93■□□□□ 0.46
RPAIN-209ENST00000571558 POTEIP0CG38 1075 aa17.93■□□□□ 0.46
RPAIN-209ENST00000571558 POTEJP0CG39 1038 aa17.93■□□□□ 0.46
RPAIN-209ENST00000571558 ST5P78524 1137 aa17.93■□□□□ 0.46
RPAIN-209ENST00000571558 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
RPAIN-209ENST00000571558 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
RPAIN-209ENST00000571558 WWC1Q8IX03 1113 aa17.93■□□□□ 0.46
RPAIN-209ENST00000571558 TAF1DQ9H5J8 278 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-209ENST00000571558 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-209ENST00000571558 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
RPAIN-209ENST00000571558 NPHP1O15259 732 aa17.92■□□□□ 0.46
RPAIN-209ENST00000571558 ITGBL1O95965 494 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-209ENST00000571558 ZNF790Q6PG37 636 aa17.92■□□□□ 0.46
RPAIN-209ENST00000571558 WBP1LQ9NX94 342 aa17.92■□□□□ 0.46
RPAIN-209ENST00000571558 HEG1Q9ULI3 1381 aa17.92■□□□□ 0.46
RPAIN-209ENST00000571558 SCN4AP35499 1836 aa17.92■□□□□ 0.46
RPAIN-209ENST00000571558 VEGFBP49765 207 aa17.91■□□□□ 0.46
RPAIN-209ENST00000571558 PNMA8AQ86V59 439 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-209ENST00000571558 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-209ENST00000571558 TBC1D2BQ9UPU7 963 aa17.91■□□□□ 0.46
RPAIN-209ENST00000571558 DLG5Q8TDM6 1919 aa17.91■□□□□ 0.46
RPAIN-209ENST00000571558 SCN7AQ01118 1682 aa17.91■□□□□ 0.46
RPAIN-209ENST00000571558 SLC34A2O95436 690 aa17.9■□□□□ 0.46
RPAIN-209ENST00000571558 TEFQ10587 303 aa17.9■□□□□ 0.46
RPAIN-209ENST00000571558 CCDC93Q567U6 631 aa17.9■□□□□ 0.46
RPAIN-209ENST00000571558 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.46
RPAIN-209ENST00000571558 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.46
RPAIN-209ENST00000571558 C7orf43Q8WVR3 580 aa17.89■□□□□ 0.46
RPAIN-209ENST00000571558 RASSF10A6NK89 507 aa17.89■□□□□ 0.45
RPAIN-209ENST00000571558 CAMTA2O94983 1202 aa17.89■□□□□ 0.45
RPAIN-209ENST00000571558 MAP2K1Q02750 393 aaPredicted RBP17.89■□□□□ 0.45
RPAIN-209ENST00000571558 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
RPAIN-209ENST00000571558 FMNL2Q96PY5 1086 aa17.89■□□□□ 0.45
RPAIN-209ENST00000571558 HACL1Q9UJ83 578 aa17.89■□□□□ 0.45
RPAIN-209ENST00000571558 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-209ENST00000571558 GNAT3A8MTJ3 354 aa17.88■□□□□ 0.45
RPAIN-209ENST00000571558 RGL2O15211 777 aa17.88■□□□□ 0.45
RPAIN-209ENST00000571558 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
RPAIN-209ENST00000571558 CCDC24Q8N4L8 307 aa17.88■□□□□ 0.45
RPAIN-209ENST00000571558 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-209ENST00000571558 KLRG2A4D1S0 409 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-209ENST00000571558 NPR1P16066 1061 aa17.87■□□□□ 0.45
RPAIN-209ENST00000571558 LBX1P52954 281 aa17.87■□□□□ 0.45
RPAIN-209ENST00000571558 FKBP4Q02790 459 aaKnown RBP eCLIP17.87■□□□□ 0.45
RPAIN-209ENST00000571558 DEFB115Q30KQ5 88 aa17.87■□□□□ 0.45
RPAIN-209ENST00000571558 RTKN2Q8IZC4 609 aa17.87■□□□□ 0.45
RPAIN-209ENST00000571558 SLX4Q8IY92 1834 aa17.87■□□□□ 0.45
RPAIN-209ENST00000571558 CEMIPQ8WUJ3 1361 aa17.86■□□□□ 0.45
RPAIN-209ENST00000571558 ARFGEF2Q9Y6D5 1785 aa17.86■□□□□ 0.45
RPAIN-209ENST00000571558 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
RPAIN-209ENST00000571558 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
RPAIN-209ENST00000571558 VIRMAQ69YN4 1812 aaKnown RBP17.86■□□□□ 0.45
RPAIN-209ENST00000571558 EPHX2P34913 555 aa17.85■□□□□ 0.45
RPAIN-209ENST00000571558 GOLGA2Q08379 1002 aa17.85■□□□□ 0.45
RPAIN-209ENST00000571558 EAPPQ56P03 285 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-209ENST00000571558 MCM10Q7L590 875 aa17.85■□□□□ 0.45
RPAIN-209ENST00000571558 NBPF5PQ86XG9 351 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-209ENST00000571558 DZIP3Q86Y13 1208 aaKnown RBP17.85■□□□□ 0.45
RPAIN-209ENST00000571558 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
RPAIN-209ENST00000571558 THUMPD2Q9BTF0 503 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms